data_A1H9Z
# 
_chem_comp.id                                    A1H9Z 
_chem_comp.name                                  "tert-butyl N-[1-[(2S)-3-cyclopropyl-1-[[(2S,3R)-4-(methylamino)-3-oxidanyl-4-oxidanylidene-1-[(3S)-2-oxidanylidenepyrrolidin-3-yl]butan-2-yl]amino]-1-oxidanylidene-propan-2-yl]-5-fluoranyl-2-oxidanylidene-pyridin-3-yl]carbamate" 
_chem_comp.type                                  non-polymer 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C25 H36 F N5 O7" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2024-04-29 
_chem_comp.pdbx_modified_date                    2025-01-24 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        537.581 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     A1H9Z 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        9F3A 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  PDBE 
_chem_comp.pdbx_pcm                              Y 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.pdbx_n_terminal_atom_flag 
_chem_comp_atom.pdbx_backbone_atom_flag 
_chem_comp_atom.pdbx_c_terminal_atom_flag 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
A1H9Z N1  N1  N 0 1 N N N N N N 29.447 -2.892 18.477 -1.346 1.595  -0.209 N1  A1H9Z 1  
A1H9Z N3  N2  N 0 1 N N N N N N 27.585 -1.533 21.143 2.146  0.502  -0.693 N3  A1H9Z 2  
A1H9Z C4  C1  C 0 1 N N N N N N 29.057 -1.980 17.525 -2.490 0.902  -0.368 C4  A1H9Z 3  
A1H9Z C5  C2  C 0 1 N N N N N N 30.695 -3.456 18.478 -1.258 2.590  0.715  C5  A1H9Z 4  
A1H9Z C6  C3  C 0 1 N N S N N N 28.533 -3.165 19.586 -0.181 1.269  -1.035 C6  A1H9Z 5  
A1H9Z C7  C4  C 0 1 N N N N N N 28.682 -1.940 20.495 0.963  0.850  -0.148 C7  A1H9Z 6  
A1H9Z C8  C5  C 0 1 N N S N N N 27.616 -0.514 22.179 3.257  0.094  0.170  C8  A1H9Z 7  
A1H9Z C10 C6  C 0 1 N N N N N N 27.764 -5.561 19.947 -0.884 2.851  -2.837 C10 A1H9Z 8  
A1H9Z C13 C7  C 0 1 N N R N N N 27.359 -1.187 23.536 4.103  1.319  0.525  C13 A1H9Z 9  
A1H9Z C15 C8  C 0 1 N N N N N N 26.656 0.616  21.807 4.125  -0.929 -0.566 C15 A1H9Z 10 
A1H9Z C17 C9  C 0 1 N N N N N N 28.427 2.291  20.898 2.933  -2.890 0.492  C17 A1H9Z 11 
A1H9Z C20 C10 C 0 1 N N N N N N 29.311 -0.178 26.627 7.307  -0.288 1.865  C20 A1H9Z 12 
A1H9Z C21 C11 C 0 1 N N N N N N 30.376 0.092  14.928 -4.828 -0.844 0.436  C21 A1H9Z 13 
A1H9Z C22 C12 C 0 1 N N N N N N 29.628 1.113  12.838 -5.895 -2.978 0.379  C22 A1H9Z 14 
A1H9Z C24 C13 C 0 1 N N N N N N 29.117 -0.217 12.304 -7.251 -3.595 0.030  C24 A1H9Z 15 
A1H9Z C1  C14 C 0 1 N N N N N N 31.590 -3.180 17.490 -2.320 2.910  1.492  C1  A1H9Z 16 
A1H9Z C2  C15 C 0 1 N N N N N N 31.283 -2.270 16.506 -3.529 2.213  1.349  C2  A1H9Z 17 
A1H9Z C3  C16 C 0 1 N N N N N N 30.019 -1.722 16.486 -3.615 1.206  0.428  C3  A1H9Z 18 
A1H9Z F1  F1  F 0 1 N N N N N N 32.788 -3.782 17.478 -2.218 3.908  2.398  F1  A1H9Z 19 
A1H9Z N2  N3  N 0 1 N N N N N N 29.561 -0.743 15.608 -4.811 0.493  0.265  N2  A1H9Z 20 
A1H9Z O1  O1  O 0 1 N N N N N N 27.959 -1.442 17.582 -2.553 0.012  -1.202 O1  A1H9Z 21 
A1H9Z C9  C17 C 0 1 N N N N N N 28.772 -4.502 20.283 0.228  2.500  -1.847 C9  A1H9Z 22 
A1H9Z C11 C18 C 0 1 N N N N N N 28.165 -6.999 19.993 -0.617 3.986  -3.827 C11 A1H9Z 23 
A1H9Z C12 C19 C 0 1 N N N N N N 27.882 -6.345 18.680 -1.586 4.199  -2.662 C12 A1H9Z 24 
A1H9Z O2  O2  O 0 1 N N N N N N 29.776 -1.372 20.603 0.819  0.825  1.056  O2  A1H9Z 25 
A1H9Z C14 C20 C 0 1 N N N N N N 27.753 -0.314 24.705 5.226  0.905  1.441  C14 A1H9Z 26 
A1H9Z N4  N4  N 0 1 N N N N N N 28.731 -0.833 25.465 6.267  0.201  0.956  N4  A1H9Z 27 
A1H9Z C16 C21 C 0 1 N N S N N N 27.199 1.413  20.627 3.306  -2.192 -0.837 C16 A1H9Z 28 
A1H9Z C18 C22 C 0 1 N N N N N N 28.152 3.588  20.146 3.030  -4.382 0.102  C18 A1H9Z 29 
A1H9Z N5  N5  N 0 1 N N N N N N 26.712 3.569  19.945 3.971  -4.432 -1.023 N5  A1H9Z 30 
A1H9Z C19 C23 C 0 1 N N N N N N 26.161 2.364  20.058 4.141  -3.217 -1.573 C19 A1H9Z 31 
A1H9Z O3  O3  O 0 1 N N N N N N 25.001 2.043  19.747 4.857  -2.978 -2.521 O3  A1H9Z 32 
A1H9Z O4  O4  O 0 1 N N N N N N 28.149 -2.358 23.689 3.284  2.288  1.182  O4  A1H9Z 33 
A1H9Z O5  O5  O 0 1 N N N N N N 27.192 0.780  24.868 5.192  1.207  2.616  O5  A1H9Z 34 
A1H9Z O6  O6  O 0 1 N N N N N N 29.608 0.992  14.306 -5.949 -1.542 0.172  O6  A1H9Z 35 
A1H9Z O7  O7  O 0 1 N N N N N N 31.584 0.112  14.971 -3.832 -1.419 0.827  O7  A1H9Z 36 
A1H9Z C23 C24 C 0 1 N N N N N N 28.689 2.276  12.563 -5.563 -3.271 1.843  C23 A1H9Z 37 
A1H9Z C25 C25 C 0 1 N N N N N N 31.050 1.409  12.398 -4.813 -3.582 -0.520 C25 A1H9Z 38 
A1H9Z H5  H1  H 0 1 N N N N N N 26.707 -1.947 20.905 2.261  0.521  -1.656 H5  A1H9Z 39 
A1H9Z H2  H2  H 0 1 N N N N N N 30.973 -4.130 19.275 -0.330 3.131  0.830  H2  A1H9Z 40 
A1H9Z H4  H3  H 0 1 N N N N N N 27.504 -3.169 19.198 -0.433 0.454  -1.713 H4  A1H9Z 41 
A1H9Z H6  H4  H 0 1 N N N N N N 28.629 -0.087 22.213 2.864  -0.353 1.083  H6  A1H9Z 42 
A1H9Z H9  H5  H 0 1 N N N N N N 26.735 -5.349 20.274 -1.487 2.011  -3.185 H9  A1H9Z 43 
A1H9Z H14 H6  H 0 1 N N N N N N 26.290 -1.433 23.613 4.518  1.750  -0.386 H14 A1H9Z 44 
A1H9Z H17 H7  H 0 1 N N N N N N 25.680 0.187  21.535 4.463  -0.505 -1.512 H17 A1H9Z 45 
A1H9Z H16 H8  H 0 1 N N N N N N 26.534 1.286  22.671 4.990  -1.181 0.048  H16 A1H9Z 46 
A1H9Z H19 H9  H 0 1 N N N N N N 28.536 2.483  21.976 3.650  -2.645 1.276  H19 A1H9Z 47 
A1H9Z H20 H10 H 0 1 N N N N N N 29.340 1.809  20.518 1.919  -2.632 0.798  H20 A1H9Z 48 
A1H9Z H27 H11 H 0 1 N N N N N N 30.090 -0.822 27.061 8.061  -0.832 1.295  H27 A1H9Z 49 
A1H9Z H25 H12 H 0 1 N N N N N N 29.756 0.781  26.323 7.774  0.557  2.370  H25 A1H9Z 50 
A1H9Z H26 H13 H 0 1 N N N N N N 28.526 0.003  27.376 6.861  -0.953 2.604  H26 A1H9Z 51 
A1H9Z H31 H14 H 0 1 N N N N N N 29.107 -0.192 11.204 -8.021 -3.165 0.670  H31 A1H9Z 52 
A1H9Z H33 H15 H 0 1 N N N N N N 29.777 -1.027 12.646 -7.487 -3.387 -1.014 H33 A1H9Z 53 
A1H9Z H32 H16 H 0 1 N N N N N N 28.097 -0.394 12.676 -7.210 -4.674 0.185  H32 A1H9Z 54 
A1H9Z H1  H17 H 0 1 N N N N N N 32.017 -1.991 15.765 -4.380 2.463  1.966  H1  A1H9Z 55 
A1H9Z H3  H18 H 0 1 N N N N N N 28.574 -0.653 15.474 -5.627 0.962  0.030  H3  A1H9Z 56 
A1H9Z H7  H19 H 0 1 N N N N N N 29.767 -4.869 19.993 0.394  3.341  -1.174 H7  A1H9Z 57 
A1H9Z H8  H20 H 0 1 N N N N N N 28.746 -4.334 21.370 1.147  2.285  -2.394 H8  A1H9Z 58 
A1H9Z H10 H21 H 0 1 N N N N N N 29.196 -7.274 20.259 0.352  4.483  -3.773 H10 A1H9Z 59 
A1H9Z H11 H22 H 0 1 N N N N N N 27.470 -7.751 20.394 -1.044 3.894  -4.826 H11 A1H9Z 60 
A1H9Z H12 H23 H 0 1 N N N N N N 28.705 -6.138 17.980 -2.650 4.247  -2.895 H12 A1H9Z 61 
A1H9Z H13 H24 H 0 1 N N N N N N 26.978 -6.615 18.114 -1.255 4.836  -1.842 H13 A1H9Z 62 
A1H9Z H15 H25 H 0 1 N N N N N N 29.086 -1.734 25.214 6.327  0.017  0.006  H15 A1H9Z 63 
A1H9Z H18 H26 H 0 1 N N N N N N 27.469 0.698  19.836 2.408  -1.949 -1.405 H18 A1H9Z 64 
A1H9Z H21 H27 H 0 1 N N N N N N 28.453 4.460  20.745 3.412  -4.966 0.939  H21 A1H9Z 65 
A1H9Z H22 H28 H 0 1 N N N N N N 28.683 3.603  19.183 2.054  -4.756 -0.206 H22 A1H9Z 66 
A1H9Z H23 H29 H 0 1 N N N N N N 26.182 4.391  19.739 4.414  -5.239 -1.331 H23 A1H9Z 67 
A1H9Z H24 H30 H 0 1 N N N N N N 27.970 -2.753 24.534 2.540  2.600  0.649  H24 A1H9Z 68 
A1H9Z H28 H31 H 0 1 N N N N N N 28.631 2.453  11.479 -5.522 -4.349 1.998  H28 A1H9Z 69 
A1H9Z H29 H32 H 0 1 N N N N N N 27.687 2.037  12.949 -4.597 -2.831 2.092  H29 A1H9Z 70 
A1H9Z H30 H33 H 0 1 N N N N N N 29.069 3.180  13.062 -6.333 -2.841 2.483  H30 A1H9Z 71 
A1H9Z H35 H34 H 0 1 N N N N N N 31.083 1.503  11.303 -4.772 -4.660 -0.365 H35 A1H9Z 72 
A1H9Z H34 H35 H 0 1 N N N N N N 31.387 2.350  12.857 -5.050 -3.374 -1.563 H34 A1H9Z 73 
A1H9Z H36 H36 H 0 1 N N N N N N 31.710 0.589  12.716 -3.847 -3.142 -0.271 H36 A1H9Z 74 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
A1H9Z C1  C2  SING N N 1  
A1H9Z C2  C3  DOUB N N 2  
A1H9Z C3  C4  SING N N 3  
A1H9Z C4  N1  SING N N 4  
A1H9Z N1  C5  SING N N 5  
A1H9Z C1  C5  DOUB N N 6  
A1H9Z C1  F1  SING N N 7  
A1H9Z C3  N2  SING N N 8  
A1H9Z N1  C6  SING N N 9  
A1H9Z C4  O1  DOUB N N 10 
A1H9Z C6  C7  SING N N 11 
A1H9Z C7  N3  SING N N 12 
A1H9Z N3  C8  SING N N 13 
A1H9Z C6  C9  SING N N 14 
A1H9Z C9  C10 SING N N 15 
A1H9Z C10 C11 SING N N 16 
A1H9Z C11 C12 SING N N 17 
A1H9Z C10 C12 SING N N 18 
A1H9Z C7  O2  DOUB N N 19 
A1H9Z C8  C13 SING N N 20 
A1H9Z C13 C14 SING N N 21 
A1H9Z C14 N4  SING N N 22 
A1H9Z C8  C15 SING N N 23 
A1H9Z C15 C16 SING N N 24 
A1H9Z C16 C17 SING N N 25 
A1H9Z C17 C18 SING N N 26 
A1H9Z C18 N5  SING N N 27 
A1H9Z N5  C19 SING N N 28 
A1H9Z C16 C19 SING N N 29 
A1H9Z C19 O3  DOUB N N 30 
A1H9Z C13 O4  SING N N 31 
A1H9Z C14 O5  DOUB N N 32 
A1H9Z N4  C20 SING N N 33 
A1H9Z N2  C21 SING N N 34 
A1H9Z C21 O6  SING N N 35 
A1H9Z O6  C22 SING N N 36 
A1H9Z C21 O7  DOUB N N 37 
A1H9Z C22 C23 SING N N 38 
A1H9Z C22 C24 SING N N 39 
A1H9Z C22 C25 SING N N 40 
A1H9Z N3  H5  SING N N 41 
A1H9Z C5  H2  SING N N 42 
A1H9Z C6  H4  SING N N 43 
A1H9Z C8  H6  SING N N 44 
A1H9Z C10 H9  SING N N 45 
A1H9Z C13 H14 SING N N 46 
A1H9Z C15 H17 SING N N 47 
A1H9Z C15 H16 SING N N 48 
A1H9Z C17 H19 SING N N 49 
A1H9Z C17 H20 SING N N 50 
A1H9Z C20 H27 SING N N 51 
A1H9Z C20 H25 SING N N 52 
A1H9Z C20 H26 SING N N 53 
A1H9Z C24 H31 SING N N 54 
A1H9Z C24 H33 SING N N 55 
A1H9Z C24 H32 SING N N 56 
A1H9Z C2  H1  SING N N 57 
A1H9Z N2  H3  SING N N 58 
A1H9Z C9  H7  SING N N 59 
A1H9Z C9  H8  SING N N 60 
A1H9Z C11 H10 SING N N 61 
A1H9Z C11 H11 SING N N 62 
A1H9Z C12 H12 SING N N 63 
A1H9Z C12 H13 SING N N 64 
A1H9Z N4  H15 SING N N 65 
A1H9Z C16 H18 SING N N 66 
A1H9Z C18 H21 SING N N 67 
A1H9Z C18 H22 SING N N 68 
A1H9Z N5  H23 SING N N 69 
A1H9Z O4  H24 SING N N 70 
A1H9Z C23 H28 SING N N 71 
A1H9Z C23 H29 SING N N 72 
A1H9Z C23 H30 SING N N 73 
A1H9Z C25 H35 SING N N 74 
A1H9Z C25 H34 SING N N 75 
A1H9Z C25 H36 SING N N 76 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
A1H9Z InChI            InChI                1.06  "InChI=1S/C25H36FN5O7/c1-25(2,3)38-24(37)30-17-11-15(26)12-31(23(17)36)18(9-13-5-6-13)21(34)29-16(19(32)22(35)27-4)10-14-7-8-28-20(14)33/h11-14,16,18-19,32H,5-10H2,1-4H3,(H,27,35)(H,28,33)(H,29,34)(H,30,37)/t14-,16-,18-,19+/m0/s1" 
A1H9Z InChIKey         InChI                1.06  ZGDGTWIETIEHBK-OYSPMZIOSA-N                                                                                                                                                                                                            
A1H9Z SMILES_CANONICAL CACTVS               3.385 "CNC(=O)[C@H](O)[C@H](C[C@@H]1CCNC1=O)NC(=O)[C@H](CC2CC2)N3C=C(F)C=C(NC(=O)OC(C)(C)C)C3=O"                                                                                                                                             
A1H9Z SMILES           CACTVS               3.385 "CNC(=O)[CH](O)[CH](C[CH]1CCNC1=O)NC(=O)[CH](CC2CC2)N3C=C(F)C=C(NC(=O)OC(C)(C)C)C3=O"                                                                                                                                                  
A1H9Z SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "CC(C)(C)OC(=O)NC1=CC(=CN(C1=O)[C@@H](CC2CC2)C(=O)N[C@@H](C[C@@H]3CCNC3=O)[C@H](C(=O)NC)O)F"                                                                                                                                           
A1H9Z SMILES           "OpenEye OEToolkits" 2.0.7 "CC(C)(C)OC(=O)NC1=CC(=CN(C1=O)C(CC2CC2)C(=O)NC(CC3CCNC3=O)C(C(=O)NC)O)F"                                                                                                                                                              
# 
_pdbx_chem_comp_identifier.comp_id           A1H9Z 
_pdbx_chem_comp_identifier.type              "SYSTEMATIC NAME" 
_pdbx_chem_comp_identifier.program           "OpenEye OEToolkits" 
_pdbx_chem_comp_identifier.program_version   2.0.7 
_pdbx_chem_comp_identifier.identifier        "~{tert}-butyl ~{N}-[1-[(2~{S})-3-cyclopropyl-1-[[(2~{S},3~{R})-4-(methylamino)-3-oxidanyl-4-oxidanylidene-1-[(3~{S})-2-oxidanylidenepyrrolidin-3-yl]butan-2-yl]amino]-1-oxidanylidene-propan-2-yl]-5-fluoranyl-2-oxidanylidene-pyridin-3-yl]carbamate" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
A1H9Z "Create component" 2024-04-29 PDBE 
A1H9Z "Modify PCM"       2024-09-27 PDBE 
A1H9Z "Initial release"  2025-01-29 RCSB 
# 
_pdbx_chem_comp_pcm.pcm_id                             1 
_pdbx_chem_comp_pcm.comp_id                            A1H9Z 
_pdbx_chem_comp_pcm.modified_residue_id                CYS 
_pdbx_chem_comp_pcm.type                               None 
_pdbx_chem_comp_pcm.category                           "Covalent chemical modification" 
_pdbx_chem_comp_pcm.position                           "Amino-acid side chain" 
_pdbx_chem_comp_pcm.polypeptide_position               "Any position" 
_pdbx_chem_comp_pcm.comp_id_linking_atom               C13 
_pdbx_chem_comp_pcm.modified_residue_id_linking_atom   SG 
_pdbx_chem_comp_pcm.uniprot_specific_ptm_accession     ? 
_pdbx_chem_comp_pcm.uniprot_generic_ptm_accession      ? 
# 
