data_A1H0Z
# 
_chem_comp.id                                    A1H0Z 
_chem_comp.name                                  D-Ribitol-5-phosphate 
_chem_comp.type                                  D-saccharide 
_chem_comp.pdbx_type                             ATOMS 
_chem_comp.formula                               "C5 H13 O8 P" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         "[(2R,3S,4S)-2,3,4,5-tetrakis(oxidanyl)pentyl] dihydrogen phosphate" 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2023-12-20 
_chem_comp.pdbx_modified_date                    2024-05-10 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        232.126 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     A1H0Z 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   Y 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        8RDF 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  PDBE 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.pdbx_n_terminal_atom_flag 
_chem_comp_atom.pdbx_backbone_atom_flag 
_chem_comp_atom.pdbx_c_terminal_atom_flag 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
A1H0Z O1   O1  O 0 1 N Y N N N N -15.832 9.785  -36.304 -5.556 0.179  -0.308 O1   A1H0Z 1  
A1H0Z C1   C1  C 0 1 N N N N N N -16.593 9.662  -37.519 -4.354 0.626  0.324  C1   A1H0Z 2  
A1H0Z O2   O2  O 0 1 N N N N N N -16.641 9.014  -39.811 -3.251 -1.505 0.030  O2   A1H0Z 3  
A1H0Z C3   C2  C 0 1 N N S N N N -15.395 7.597  -38.321 -1.862 0.452  0.308  C3   A1H0Z 4  
A1H0Z O3   O3  O 0 1 N N N N N N -16.066 7.187  -37.125 -1.767 1.844  -0.001 O3   A1H0Z 5  
A1H0Z C4   C3  C 0 1 N N R N N N -13.883 7.367  -38.194 -0.664 -0.286 -0.294 C4   A1H0Z 6  
A1H0Z O4   O4  O 0 1 N N N N N N -13.150 8.451  -38.775 -0.759 -1.678 0.014  O4   A1H0Z 7  
A1H0Z C5   C4  C 0 1 N N N N N N -13.429 6.050  -38.790 0.631  0.279  0.292  C5   A1H0Z 8  
A1H0Z C2   C5  C 0 1 N N S N N N -15.808 9.031  -38.649 -3.157 -0.113 -0.278 C2   A1H0Z 9  
A1H0Z O5   O5  O 0 1 N N N N N N -14.265 4.956  -38.315 1.751  -0.328 -0.354 O5   A1H0Z 10 
A1H0Z P    P1  P 0 1 N N N N N N -14.039 3.490  -38.807 3.277  0.031  0.014  P    A1H0Z 11 
A1H0Z O2P  O6  O 0 1 N N N N N N -12.569 3.135  -38.464 3.574  1.566  -0.370 O2P  A1H0Z 12 
A1H0Z O1P  O7  O 0 1 N N N N N N -14.982 2.499  -38.205 3.494  -0.166 1.464  O1P  A1H0Z 13 
A1H0Z HO1  H1  H 0 1 N Y N N N N -16.371 10.185 -35.632 -6.357 0.606  0.025  HO1  A1H0Z 14 
A1H0Z H12  H2  H 0 1 N N N N N N -16.915 10.666 -37.834 -4.237 1.698  0.165  H12  A1H0Z 15 
A1H0Z H11  H3  H 0 1 N N N N N N -17.477 9.040  -37.317 -4.407 0.420  1.393  H11  A1H0Z 16 
A1H0Z HO2  H4  H 0 1 N N N N N N -16.905 9.901  -40.025 -3.259 -1.698 0.977  HO2  A1H0Z 17 
A1H0Z HC3  H5  H 0 1 N N N N N N -15.748 6.963  -39.148 -1.864 0.319  1.390  HC3  A1H0Z 18 
A1H0Z HO3  H6  H 0 1 N N N N N N -15.816 6.296  -36.911 -1.759 2.038  -0.948 HO3  A1H0Z 19 
A1H0Z HC4  H7  H 0 1 N N N N N N -13.653 7.334  -37.119 -0.662 -0.153 -1.376 HC4  A1H0Z 20 
A1H0Z HO4  H8  H 0 1 N N N N N N -13.442 9.271  -38.395 -0.766 -1.872 0.961  HO4  A1H0Z 21 
A1H0Z H51  H9  H 0 1 N N N N N N -12.386 5.861  -38.497 0.661  1.357  0.134  H51  A1H0Z 22 
A1H0Z H52  H10 H 0 1 N N N N N N -13.497 6.107  -39.886 0.669  0.067  1.360  H52  A1H0Z 23 
A1H0Z HC2  H11 H 0 1 N N N N N N -14.904 9.629  -38.837 -3.154 0.020  -1.360 HC2  A1H0Z 24 
A1H0Z HOP2 H12 H 0 0 N N N N N N -12.549 2.348  -37.932 3.452  1.768  -1.308 HOP2 A1H0Z 25 
A1H0Z O3P  O1P O 0 1 N Y N N N N ?       ?      ?       4.269  -0.931 -0.813 O3P  A1H0Z 26 
A1H0Z HOP3 H13 H 0 0 N Y N N N N ?       ?      ?       5.207  -0.770 -0.640 HOP3 A1H0Z 27 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
A1H0Z O2  C2   SING N N 1  
A1H0Z P   O2P  SING N N 2  
A1H0Z P   O5   SING N N 3  
A1H0Z P   O1P  DOUB N N 4  
A1H0Z C5  O5   SING N N 5  
A1H0Z C5  C4   SING N N 6  
A1H0Z O4  C4   SING N N 7  
A1H0Z C2  C3   SING N N 8  
A1H0Z C2  C1   SING N N 9  
A1H0Z C3  C4   SING N N 10 
A1H0Z C3  O3   SING N N 11 
A1H0Z C1  O1   SING N N 12 
A1H0Z O1  HO1  SING N N 13 
A1H0Z C1  H12  SING N N 14 
A1H0Z C1  H11  SING N N 15 
A1H0Z O2  HO2  SING N N 16 
A1H0Z C3  HC3  SING N N 17 
A1H0Z O3  HO3  SING N N 18 
A1H0Z C4  HC4  SING N N 19 
A1H0Z O4  HO4  SING N N 20 
A1H0Z C5  H51  SING N N 21 
A1H0Z C5  H52  SING N N 22 
A1H0Z C2  HC2  SING N N 23 
A1H0Z O2P HOP2 SING N N 24 
A1H0Z P   O3P  SING N N 25 
A1H0Z O3P HOP3 SING N N 26 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
A1H0Z InChI            InChI                1.06  "InChI=1S/C5H13O8P/c6-1-3(7)5(9)4(8)2-13-14(10,11)12/h3-9H,1-2H2,(H2,10,11,12)/t3-,4+,5-/m0/s1" 
A1H0Z InChIKey         InChI                1.06  VJDOAZKNBQCAGE-LMVFSUKVSA-N                                                                     
A1H0Z SMILES_CANONICAL CACTVS               3.385 "OC[C@H](O)[C@H](O)[C@H](O)CO[P](O)(O)=O"                                                       
A1H0Z SMILES           CACTVS               3.385 "OC[CH](O)[CH](O)[CH](O)CO[P](O)(O)=O"                                                          
A1H0Z SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "C([C@@H]([C@@H]([C@@H](COP(=O)(O)O)O)O)O)O"                                                    
A1H0Z SMILES           "OpenEye OEToolkits" 2.0.7 "C(C(C(C(COP(=O)(O)O)O)O)O)O"                                                                   
# 
_pdbx_chem_comp_identifier.comp_id           A1H0Z 
_pdbx_chem_comp_identifier.type              "SYSTEMATIC NAME" 
_pdbx_chem_comp_identifier.program           "OpenEye OEToolkits" 
_pdbx_chem_comp_identifier.program_version   2.0.7 
_pdbx_chem_comp_identifier.identifier        "[(2~{R},3~{S},4~{S})-2,3,4,5-tetrakis(oxidanyl)pentyl] dihydrogen phosphate" 
# 
_pdbx_chem_comp_synonyms.ordinal      1 
_pdbx_chem_comp_synonyms.comp_id      A1H0Z 
_pdbx_chem_comp_synonyms.name         "[(2R,3S,4S)-2,3,4,5-tetrakis(oxidanyl)pentyl] dihydrogen phosphate" 
_pdbx_chem_comp_synonyms.provenance   PDB 
_pdbx_chem_comp_synonyms.type         ? 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
A1H0Z "Create component" 2023-12-20 PDBE 
A1H0Z "Initial release"  2024-05-15 RCSB 
# 
