data_A1D5Z
# 
_chem_comp.id                                    A1D5Z 
_chem_comp.name                                  "(1~{R})-1-[10-[3-(dimethylamino)propyl]phenothiazin-2-yl]ethanol" 
_chem_comp.type                                  non-polymer 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C19 H24 N2 O S" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2024-02-04 
_chem_comp.pdbx_modified_date                    2024-10-04 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        328.472 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     A1D5Z 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        8Y5B 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  PDBC 
_chem_comp.pdbx_pcm                              ? 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.pdbx_n_terminal_atom_flag 
_chem_comp_atom.pdbx_backbone_atom_flag 
_chem_comp_atom.pdbx_c_terminal_atom_flag 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
A1D5Z C10  C1  C 0 1 Y N N N N N -16.901 23.635 4.674  4.378  0.056  -0.358 C10  A1D5Z 1  
A1D5Z C11  C2  C 0 1 Y N N N N N -19.231 25.130 4.149  2.449  -1.914 -0.123 C11  A1D5Z 2  
A1D5Z C13  C3  C 0 1 Y N N N N N -18.732 24.956 10.509 -1.106 3.370  -0.204 C13  A1D5Z 3  
A1D5Z C14  C4  C 0 1 Y N N N N N -20.216 25.619 8.720  -1.200 1.000  0.133  C14  A1D5Z 4  
A1D5Z C17  C5  C 0 1 N N N N N N -22.441 24.008 6.806  -0.728 -2.149 0.025  C17  A1D5Z 5  
A1D5Z C18  C6  C 0 1 Y N N N N N -17.883 23.773 5.647  3.078  0.402  -0.016 C18  A1D5Z 6  
A1D5Z C21  C7  C 0 1 Y N N N N N -19.565 24.770 7.799  0.186  0.951  0.245  C21  A1D5Z 7  
A1D5Z C22  C8  C 0 1 Y N N N N N -19.821 25.720 10.066 -1.840 2.204  -0.090 C22  A1D5Z 8  
A1D5Z C23  C9  C 0 1 N N R N N N -20.605 26.664 11.009 -3.341 2.247  -0.208 C23  A1D5Z 9  
A1D5Z C05  C10 C 0 1 N N N N N N -24.375 21.764 7.271  -2.872 -5.231 0.238  C05  A1D5Z 10 
A1D5Z C06  C11 C 0 1 N N N N N N -22.705 20.053 6.535  -3.254 -3.208 -1.038 C06  A1D5Z 11 
A1D5Z C07  C12 C 0 1 N N N N N N -22.113 26.327 11.131 -3.945 2.713  1.118  C07  A1D5Z 12 
A1D5Z C08  C13 C 0 1 Y N N N N N -17.079 24.256 3.446  4.710  -1.268 -0.581 C08  A1D5Z 13 
A1D5Z C09  C14 C 0 1 Y N N N N N -18.231 24.994 3.183  3.746  -2.250 -0.465 C09  A1D5Z 14 
A1D5Z C12  C15 C 0 1 Y N N N N N -18.037 24.118 9.622  0.270  3.329  -0.095 C12  A1D5Z 15 
A1D5Z C15  C16 C 0 1 N N N N N N -21.404 24.973 6.159  -0.004 -1.335 1.099  C15  A1D5Z 16 
A1D5Z C16  C17 C 0 1 N N N N N N -22.252 22.573 6.258  -1.560 -3.247 0.692  C16  A1D5Z 17 
A1D5Z C19  C18 C 0 1 Y N N N N N -18.458 24.032 8.283  0.920  2.122  0.127  C19  A1D5Z 18 
A1D5Z C20  C19 C 0 1 Y N N N N N -19.061 24.519 5.415  2.106  -0.587 0.111  C20  A1D5Z 19 
A1D5Z N03  N1  N 0 1 N N N N N N -20.010 24.619 6.451  0.793  -0.284 0.461  N03  A1D5Z 20 
A1D5Z N04  N2  N 0 1 N N N N N N -22.904 21.451 7.072  -2.256 -4.029 -0.339 N04  A1D5Z 21 
A1D5Z O02  O1  O 0 1 N N N N N N -19.963 26.579 12.269 -3.711 3.157  -1.246 O02  A1D5Z 22 
A1D5Z S01  S1  S 0 1 N N N N N N -17.631 22.934 7.179  2.676  2.095  0.251  S01  A1D5Z 23 
A1D5Z H101 H1  H 0 0 N N N N N N -16.013 23.053 4.870  5.132  0.824  -0.455 H101 A1D5Z 24 
A1D5Z H111 H2  H 0 0 N N N N N N -20.125 25.696 3.932  1.700  -2.686 -0.030 H111 A1D5Z 25 
A1D5Z H131 H3  H 0 0 N N N N N N -18.425 25.013 11.543 -1.608 4.310  -0.377 H131 A1D5Z 26 
A1D5Z H141 H4  H 0 0 N N N N N N -21.050 26.214 8.378  -1.778 0.092  0.221  H141 A1D5Z 27 
A1D5Z H172 H5  H 0 0 N N N N N N -22.300 24.002 7.897  -1.384 -1.493 -0.547 H172 A1D5Z 28 
A1D5Z H171 H6  H 0 0 N N N N N N -23.457 24.356 6.570  0.004  -2.603 -0.642 H171 A1D5Z 29 
A1D5Z H231 H7  H 0 0 N N N N N N -20.517 27.687 10.616 -3.715 1.252  -0.448 H231 A1D5Z 30 
A1D5Z H051 H8  H 0 0 N N N N N N -24.846 20.960 7.855  -3.380 -5.791 -0.547 H051 A1D5Z 31 
A1D5Z H053 H9  H 0 0 N N N N N N -24.477 22.717 7.811  -2.100 -5.855 0.688  H053 A1D5Z 32 
A1D5Z H052 H10 H 0 0 N N N N N N -24.869 21.842 6.291  -3.593 -4.939 1.001  H052 A1D5Z 33 
A1D5Z H063 H11 H 0 0 N N N N N N -23.212 19.331 7.193  -2.760 -2.362 -1.514 H063 A1D5Z 34 
A1D5Z H062 H12 H 0 0 N N N N N N -23.128 19.986 5.522  -3.754 -3.811 -1.795 H062 A1D5Z 35 
A1D5Z H061 H13 H 0 0 N N N N N N -21.630 19.824 6.499  -3.990 -2.843 -0.321 H061 A1D5Z 36 
A1D5Z H072 H14 H 0 0 N N N N N N -22.595 27.041 11.816 -3.571 3.708  1.358  H072 A1D5Z 37 
A1D5Z H071 H15 H 0 0 N N N N N N -22.585 26.394 10.140 -5.031 2.744  1.032  H071 A1D5Z 38 
A1D5Z H073 H16 H 0 0 N N N N N N -22.230 25.306 11.524 -3.662 2.019  1.910  H073 A1D5Z 39 
A1D5Z H081 H17 H 0 0 N N N N N N -16.317 24.166 2.686  5.723  -1.533 -0.846 H081 A1D5Z 40 
A1D5Z H091 H18 H 0 0 N N N N N N -18.353 25.467 2.220  4.005  -3.283 -0.641 H091 A1D5Z 41 
A1D5Z H121 H19 H 0 0 N N N N N N -17.188 23.545 9.965  0.845  4.239  -0.184 H121 A1D5Z 42 
A1D5Z H151 H20 H 0 0 N N N N N N -21.591 25.989 6.537  -0.737 -0.881 1.767  H151 A1D5Z 43 
A1D5Z H152 H21 H 0 0 N N N N N N -21.546 24.956 5.068  0.652  -1.991 1.672  H152 A1D5Z 44 
A1D5Z H162 H22 H 0 0 N N N N N N -22.675 22.542 5.243  -0.904 -3.903 1.264  H162 A1D5Z 45 
A1D5Z H161 H23 H 0 0 N N N N N N -21.172 22.370 6.211  -2.293 -2.793 1.359  H161 A1D5Z 46 
A1D5Z H021 H25 H 0 0 N N N N N N -20.408 27.144 12.890 -3.411 4.064  -1.099 H021 A1D5Z 47 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
A1D5Z C09 C08  DOUB Y N 1  
A1D5Z C09 C11  SING Y N 2  
A1D5Z C08 C10  SING Y N 3  
A1D5Z C11 C20  DOUB Y N 4  
A1D5Z C10 C18  DOUB Y N 5  
A1D5Z C20 C18  SING Y N 6  
A1D5Z C20 N03  SING N N 7  
A1D5Z C18 S01  SING N N 8  
A1D5Z C15 N03  SING N N 9  
A1D5Z C15 C17  SING N N 10 
A1D5Z C16 C17  SING N N 11 
A1D5Z C16 N04  SING N N 12 
A1D5Z N03 C21  SING N N 13 
A1D5Z C06 N04  SING N N 14 
A1D5Z N04 C05  SING N N 15 
A1D5Z S01 C19  SING N N 16 
A1D5Z C21 C19  DOUB Y N 17 
A1D5Z C21 C14  SING Y N 18 
A1D5Z C19 C12  SING Y N 19 
A1D5Z C14 C22  DOUB Y N 20 
A1D5Z C12 C13  DOUB Y N 21 
A1D5Z C22 C13  SING Y N 22 
A1D5Z C22 C23  SING N N 23 
A1D5Z C23 C07  SING N N 24 
A1D5Z C23 O02  SING N N 25 
A1D5Z C10 H101 SING N N 26 
A1D5Z C11 H111 SING N N 27 
A1D5Z C13 H131 SING N N 28 
A1D5Z C14 H141 SING N N 29 
A1D5Z C17 H172 SING N N 30 
A1D5Z C17 H171 SING N N 31 
A1D5Z C23 H231 SING N N 32 
A1D5Z C05 H051 SING N N 33 
A1D5Z C05 H053 SING N N 34 
A1D5Z C05 H052 SING N N 35 
A1D5Z C06 H063 SING N N 36 
A1D5Z C06 H062 SING N N 37 
A1D5Z C06 H061 SING N N 38 
A1D5Z C07 H072 SING N N 39 
A1D5Z C07 H071 SING N N 40 
A1D5Z C07 H073 SING N N 41 
A1D5Z C08 H081 SING N N 42 
A1D5Z C09 H091 SING N N 43 
A1D5Z C12 H121 SING N N 44 
A1D5Z C15 H151 SING N N 45 
A1D5Z C15 H152 SING N N 46 
A1D5Z C16 H162 SING N N 47 
A1D5Z C16 H161 SING N N 48 
A1D5Z O02 H021 SING N N 49 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
A1D5Z InChI            InChI                1.06  "InChI=1S/C19H24N2OS/c1-14(22)15-9-10-19-17(13-15)21(12-6-11-20(2)3)16-7-4-5-8-18(16)23-19/h4-5,7-10,13-14,22H,6,11-12H2,1-3H3/t14-/m1/s1" 
A1D5Z InChIKey         InChI                1.06  ZIJWCRNUEBJMSQ-CQSZACIVSA-N                                                                                                                
A1D5Z SMILES_CANONICAL CACTVS               3.385 "C[C@@H](O)c1ccc2Sc3ccccc3N(CCCN(C)C)c2c1"                                                                                                 
A1D5Z SMILES           CACTVS               3.385 "C[CH](O)c1ccc2Sc3ccccc3N(CCCN(C)C)c2c1"                                                                                                   
A1D5Z SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "C[C@H](c1ccc2c(c1)N(c3ccccc3S2)CCCN(C)C)O"                                                                                                
A1D5Z SMILES           "OpenEye OEToolkits" 2.0.7 "CC(c1ccc2c(c1)N(c3ccccc3S2)CCCN(C)C)O"                                                                                                    
# 
_pdbx_chem_comp_identifier.comp_id           A1D5Z 
_pdbx_chem_comp_identifier.type              "SYSTEMATIC NAME" 
_pdbx_chem_comp_identifier.program           "OpenEye OEToolkits" 
_pdbx_chem_comp_identifier.program_version   2.0.7 
_pdbx_chem_comp_identifier.identifier        "(1~{R})-1-[10-[3-(dimethylamino)propyl]phenothiazin-2-yl]ethanol" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
A1D5Z "Create component" 2024-02-04 PDBC 
A1D5Z "Initial release"  2024-10-09 RCSB 
# 
