data_Y4Y
# 
_chem_comp.id                                    Y4Y 
_chem_comp.name                                  "6-(aminomethyl)-7-nitro-1,4-dihydroquinoxaline-2,3-dione" 
_chem_comp.type                                  non-polymer 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C9 H8 N4 O4" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2023-01-05 
_chem_comp.pdbx_modified_date                    2024-02-23 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        236.184 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     Y4Y 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        8FPL 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  RCSB 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.pdbx_backbone_atom_flag 
_chem_comp_atom.pdbx_n_terminal_atom_flag 
_chem_comp_atom.pdbx_c_terminal_atom_flag 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
Y4Y C1  C1 C 0 1 N N N N N N 166.426 127.145 173.285 3.155  0.801  -0.113 C1  Y4Y 1  
Y4Y C2  C2 C 0 1 N N N N N N 167.800 127.547 173.368 3.246  -0.681 0.025  C2  Y4Y 2  
Y4Y C3  C3 C 0 1 Y N N N N N 166.760 126.508 171.073 0.790  0.618  -0.002 C3  Y4Y 3  
Y4Y C4  C4 C 0 1 Y N N N N N 168.086 126.899 171.163 0.876  -0.769 0.137  C4  Y4Y 4  
Y4Y C5  C5 C 0 1 Y N N N N N 166.251 125.963 169.838 -0.457 1.234  -0.007 C5  Y4Y 5  
Y4Y C6  C6 C 0 1 Y N N N N N 168.960 126.762 170.021 -0.286 -1.524 0.254  C6  Y4Y 6  
Y4Y C8  C7 C 0 1 Y N N N N N 168.470 126.233 168.825 -1.518 -0.902 0.233  C8  Y4Y 7  
Y4Y O1  O1 O 0 1 N N N N N N 165.594 127.281 174.385 4.162  1.471  -0.222 O1  Y4Y 8  
Y4Y O2  O2 O 0 1 N N N N N N 168.317 128.095 174.602 4.329  -1.231 0.030  O2  Y4Y 9  
Y4Y N2  N1 N 0 1 N N N N N N 168.596 127.424 172.336 2.115  -1.404 0.144  N2  Y4Y 10 
Y4Y N1  N2 N 0 1 N N N N N N 165.940 126.638 172.148 1.941  1.390  -0.121 N1  Y4Y 11 
Y4Y C7  C8 C 0 1 Y N N N N N 167.100 125.829 168.730 -1.602 0.476  0.124  C7  Y4Y 12 
Y4Y N3  N3 N 0 1 N N N N N N 166.563 125.261 167.449 -2.928 1.134  0.103  N3  Y4Y 13 
Y4Y O3  O3 O 0 1 N N N N N N 166.504 123.840 167.259 -3.005 2.346  0.008  O3  Y4Y 14 
Y4Y O5  O4 O 0 1 N N N N N N 166.115 126.128 166.435 -3.942 0.464  0.182  O5  Y4Y 15 
Y4Y C   C9 C 0 1 N N N N N N 169.410 126.090 167.615 -2.775 -1.724 0.361  C   Y4Y 16 
Y4Y N17 N4 N 0 1 N N N N N N 168.909 126.872 166.469 -3.363 -1.929 -0.970 N17 Y4Y 17 
Y4Y H1  H1 H 0 1 N N N N N N 165.217 125.659 169.767 -0.528 2.306  -0.114 H1  Y4Y 18 
Y4Y H2  H2 H 0 1 N N N N N N 169.993 127.069 170.092 -0.224 -2.596 0.361  H2  Y4Y 19 
Y4Y H3  H3 H 0 1 N N N N N N 169.554 127.704 172.395 2.164  -2.369 0.234  H3  Y4Y 20 
Y4Y H4  H4 H 0 1 N N N N N N 164.982 126.357 172.089 1.871  2.353  -0.217 H4  Y4Y 21 
Y4Y H5  H5 H 0 1 N N N N N N 169.471 125.030 167.329 -2.535 -2.690 0.804  H5  Y4Y 22 
Y4Y H6  H6 H 0 1 N N N N N N 170.411 126.454 167.890 -3.489 -1.199 0.996  H6  Y4Y 23 
Y4Y H7  H7 H 0 1 N N N N N N 169.533 126.766 165.694 -4.208 -2.477 -0.912 H7  Y4Y 24 
Y4Y H8  H8 H 0 1 N N N N N N 168.000 126.543 166.213 -3.535 -1.047 -1.429 H8  Y4Y 25 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
Y4Y O5  N3 DOUB N N 1  
Y4Y N17 C  SING N N 2  
Y4Y O3  N3 DOUB N N 3  
Y4Y N3  C7 SING N N 4  
Y4Y C   C8 SING N N 5  
Y4Y C7  C8 DOUB Y N 6  
Y4Y C7  C5 SING Y N 7  
Y4Y C8  C6 SING Y N 8  
Y4Y C5  C3 DOUB Y N 9  
Y4Y C6  C4 DOUB Y N 10 
Y4Y C3  C4 SING Y N 11 
Y4Y C3  N1 SING N N 12 
Y4Y C4  N2 SING N N 13 
Y4Y N1  C1 SING N N 14 
Y4Y N2  C2 SING N N 15 
Y4Y C1  C2 SING N N 16 
Y4Y C1  O1 DOUB N N 17 
Y4Y C2  O2 DOUB N N 18 
Y4Y C5  H1 SING N N 19 
Y4Y C6  H2 SING N N 20 
Y4Y N2  H3 SING N N 21 
Y4Y N1  H4 SING N N 22 
Y4Y C   H5 SING N N 23 
Y4Y C   H6 SING N N 24 
Y4Y N17 H7 SING N N 25 
Y4Y N17 H8 SING N N 26 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
Y4Y SMILES           ACDLabs              12.01 "O=N(=O)c1cc2NC(=O)C(=O)Nc2cc1CN"                                                                  
Y4Y InChI            InChI                1.06  "InChI=1S/C9H8N4O4/c10-3-4-1-5-6(2-7(4)13(16)17)12-9(15)8(14)11-5/h1-2H,3,10H2,(H,11,14)(H,12,15)" 
Y4Y InChIKey         InChI                1.06  DWQWOEGFPYFGFJ-UHFFFAOYSA-N                                                                        
Y4Y SMILES_CANONICAL CACTVS               3.385 "NCc1cc2NC(=O)C(=O)Nc2cc1[N](=O)=O"                                                                
Y4Y SMILES           CACTVS               3.385 "NCc1cc2NC(=O)C(=O)Nc2cc1[N](=O)=O"                                                                
Y4Y SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "c1c(c(cc2c1NC(=O)C(=O)N2)N(=O)=O)CN"                                                              
Y4Y SMILES           "OpenEye OEToolkits" 2.0.7 "c1c(c(cc2c1NC(=O)C(=O)N2)N(=O)=O)CN"                                                              
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
Y4Y "SYSTEMATIC NAME" ACDLabs              12.01 "6-(aminomethyl)-7-nitro-1,4-dihydroquinoxaline-2,3-dione" 
Y4Y "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 "6-(aminomethyl)-7-nitro-1,4-dihydroquinoxaline-2,3-dione" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
Y4Y "Create component" 2023-01-05 RCSB 
Y4Y "Initial release"  2024-02-28 RCSB 
# 
