data_XWY
#

_chem_comp.id                                   XWY
_chem_comp.name                                 "(3R)-3-methyl-4-{6-[1-(S-methylsulfonimidoyl)cyclopropyl]-2-(naphthalen-1-yl)pyrimidin-4-yl}morpholine"
_chem_comp.type                                 non-polymer
_chem_comp.pdbx_type                            HETAIN
_chem_comp.formula                              "C23 H26 N4 O2 S"
_chem_comp.mon_nstd_parent_comp_id              ?
_chem_comp.pdbx_synonyms                        ?
_chem_comp.pdbx_formal_charge                   0
_chem_comp.pdbx_initial_date                    2021-01-18
_chem_comp.pdbx_modified_date                   2021-07-09
_chem_comp.pdbx_ambiguous_flag                  N
_chem_comp.pdbx_release_status                  REL
_chem_comp.pdbx_replaced_by                     ?
_chem_comp.pdbx_replaces                        ?
_chem_comp.formula_weight                       422.543
_chem_comp.one_letter_code                      ?
_chem_comp.three_letter_code                    XWY
_chem_comp.pdbx_model_coordinates_details       ?
_chem_comp.pdbx_model_coordinates_missing_flag  N
_chem_comp.pdbx_ideal_coordinates_details       Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag  N
_chem_comp.pdbx_model_coordinates_db_code       7LB2
_chem_comp.pdbx_subcomponent_list               ?
_chem_comp.pdbx_processing_site                 RCSB
#   #
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
XWY  C10   C1   C  0  1  N  N  R  -130.689  -174.316  113.281  -1.293   3.525  -0.014  C10   XWY   1  
XWY  C13   C2   C  0  1  N  N  N  -132.419  -175.218  115.291  -4.071   3.221   0.562  C13   XWY   2  
XWY  C15   C3   C  0  1  N  N  N  -131.085  -172.912  112.802  -0.688   3.450   1.390  C15   XWY   3  
XWY  C17   C4   C  0  1  Y  N  N  -126.798  -173.186  114.301   1.029   0.370  -0.503  C17   XWY   4  
XWY  C20   C5   C  0  1  Y  N  N  -123.885  -171.385  112.550   4.234   1.743  -1.928  C20   XWY   5  
XWY  C21   C6   C  0  1  Y  N  N  -123.674  -172.197  111.421   5.189   1.132  -1.172  C21   XWY   6  
XWY  C22   C7   C  0  1  Y  N  N  -124.520  -173.349  111.239   4.815   0.239  -0.154  C22   XWY   7  
XWY  C24   C8   C  0  1  Y  N  N  -126.336  -174.850  111.958   3.071  -0.912   1.095  C24   XWY   8  
XWY  C26   C9   C  0  1  Y  N  N  -125.149  -175.306  109.892   5.384  -1.263   1.620  C26   XWY   9  
XWY  C03   C10  C  0  1  N  N  N  -126.948  -172.326  117.856  -1.127  -2.560   0.107  C03   XWY  10  
XWY  C04   C11  C  0  1  N  N  N  -127.600  -172.418  119.205  -0.077  -3.667  -0.009  C04   XWY  11  
XWY  C05   C12  C  0  1  N  N  N  -126.373  -173.281  118.910  -0.631  -3.278   1.363  C05   XWY  12  
XWY  C06   C13  C  0  1  Y  N  N  -127.348  -172.822  116.468  -0.668  -1.141  -0.110  C06   XWY  13  
XWY  C07   C14  C  0  1  Y  N  N  -128.636  -173.307  116.246  -1.581  -0.103  -0.100  C07   XWY  14  
XWY  C08   C15  C  0  1  Y  N  N  -128.924  -173.706  114.941  -1.115   1.197  -0.315  C08   XWY  15  
XWY  C11   C16  C  0  1  N  N  N  -131.827  -175.306  113.087  -2.288   4.686  -0.081  C11   XWY  16  
XWY  C14   C17  C  0  1  N  N  N  -131.324  -174.189  115.657  -3.094   2.045   0.636  C14   XWY  17  
XWY  C18   C18  C  0  1  Y  N  N  -125.690  -172.925  113.267   2.471   0.623  -0.725  C18   XWY  18  
XWY  C19   C19  C  0  1  Y  N  N  -124.881  -171.768  113.448   2.883   1.500  -1.714  C19   XWY  19  
XWY  C23   C20  C  0  1  Y  N  N  -125.524  -173.697  112.131   3.442  -0.021   0.078  C23   XWY  20  
XWY  C25   C21  C  0  1  Y  N  N  -126.118  -175.645  110.834   4.033  -1.517   1.846  C25   XWY  21  
XWY  C27   C22  C  0  1  Y  N  N  -124.359  -174.180  110.087   5.780  -0.404   0.641  C27   XWY  22  
XWY  C29   C23  C  0  1  N  N  N  -124.445  -171.455  117.362  -3.927  -2.628   0.929  C29   XWY  23  
XWY  N01   N1   N  0  1  N  N  N  -125.882  -170.054  119.025  -2.861  -4.396  -0.771  N01   XWY  24  
XWY  N09   N2   N  0  1  N  N  N  -130.235  -174.234  114.684  -1.995   2.268  -0.314  N09   XWY  25  
XWY  N16   N3   N  0  1  Y  N  N  -128.025  -173.628  113.967   0.184   1.393  -0.506  N16   XWY  26  
XWY  N28   N4   N  0  1  Y  N  N  -126.482  -172.770  115.489   0.613  -0.876  -0.312  N28   XWY  27  
XWY  O12   O1   O  0  1  N  N  N  -132.858  -175.073  113.976  -3.366   4.437   0.826  O12   XWY  28  
XWY  O30   O2   O  0  1  N  N  N  -126.635  -169.919  116.532  -3.172  -2.242  -1.650  O30   XWY  29  
XWY  S02   S1   S  0  1  N  N  R  -126.052  -170.683  117.653  -2.807  -2.936  -0.464  S02   XWY  30  
XWY  H101  H1   H  0  0  N  N  N  -129.843  -174.652  112.663  -0.500   3.682  -0.744  H101  XWY  31  
XWY  H131  H2   H  0  0  N  N  N  -133.275  -175.080  115.968  -4.513   3.266  -0.433  H131  XWY  32  
XWY  H132  H3   H  0  0  N  N  N  -132.010  -176.231  115.418  -4.858   3.088   1.305  H132  XWY  33  
XWY  H152  H4   H  0  0  N  N  N  -130.243  -172.221  112.955  -0.060   2.562   1.468  H152  XWY  34  
XWY  H153  H5   H  0  0  N  N  N  -131.340  -172.948  111.733  -0.085   4.339   1.573  H153  XWY  35  
XWY  H151  H6   H  0  0  N  N  N  -131.956  -172.561  113.375  -1.488   3.395   2.128  H151  XWY  36  
XWY  H201  H7   H  0  0  N  N  N  -123.296  -170.495  112.716   4.533   2.431  -2.705  H201  XWY  37  
XWY  H211  H8   H  0  0  N  N  N  -122.897  -171.963  110.708   6.234   1.335  -1.355  H211  XWY  38  
XWY  H241  H9   H  0  0  N  N  N  -127.101  -175.103  112.677   2.027  -1.118   1.281  H241  XWY  39  
XWY  H261  H10  H  0  0  N  N  N  -125.012  -175.917  109.012   6.127  -1.755   2.229  H261  XWY  40  
XWY  H041  H11  H  0  0  N  N  N  -127.521  -171.577  119.910  -0.396  -4.621  -0.428  H041  XWY  41  
XWY  H042  H12  H  0  0  N  N  N  -128.589  -172.888  119.304   0.945  -3.369  -0.243  H042  XWY  42  
XWY  H052  H13  H  0  0  N  N  N  -126.478  -174.369  118.787   0.027  -2.725   2.033  H052  XWY  43  
XWY  H051  H14  H  0  0  N  N  N  -125.410  -173.058  119.393  -1.314  -3.977   1.847  H051  XWY  44  
XWY  H071  H15  H  0  0  N  N  N  -129.368  -173.370  117.038  -2.632  -0.293   0.061  H071  XWY  45  
XWY  H111  H16  H  0  0  N  N  N  -132.212  -175.212  112.061  -1.786   5.613   0.197  H111  XWY  46  
XWY  H112  H17  H  0  0  N  N  N  -131.444  -176.325  113.243  -2.679   4.773  -1.095  H112  XWY  47  
XWY  H141  H18  H  0  0  N  N  N  -130.927  -174.422  116.656  -2.693   1.968   1.647  H141  XWY  48  
XWY  H142  H19  H  0  0  N  N  N  -131.763  -173.180  115.663  -3.616   1.122   0.381  H142  XWY  49  
XWY  H191  H20  H  0  0  N  N  N  -125.046  -171.157  114.323   2.146   2.000  -2.325  H191  XWY  50  
XWY  H251  H21  H  0  0  N  N  N  -126.709  -176.537  110.691   3.744  -2.204   2.628  H251  XWY  51  
XWY  H271  H22  H  0  0  N  N  N  -123.608  -173.927  109.353   6.831  -0.217   0.477  H271  XWY  52  
XWY  H292  H23  H  0  0  N  N  N  -124.125  -171.989  118.269  -4.939  -2.925   0.653  H292  XWY  53  
XWY  H293  H24  H  0  0  N  N  N  -124.526  -172.166  116.527  -3.601  -3.208   1.792  H293  XWY  54  
XWY  H291  H25  H  0  0  N  N  N  -123.706  -170.680  117.113  -3.915  -1.567   1.178  H291  XWY  55  
XWY  H011  H26  H  0  0  N  N  N  -126.205  -169.108  119.046  -3.459  -4.975  -0.273  H011  XWY  56  
#   #
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
XWY  C26  C27   DOUB  Y  N   1  
XWY  C26  C25   SING  Y  N   2  
XWY  C27  C22   SING  Y  N   3  
XWY  C25  C24   DOUB  Y  N   4  
XWY  C22  C21   DOUB  Y  N   5  
XWY  C22  C23   SING  Y  N   6  
XWY  C21  C20   SING  Y  N   7  
XWY  C24  C23   SING  Y  N   8  
XWY  C23  C18   DOUB  Y  N   9  
XWY  C20  C19   DOUB  Y  N  10  
XWY  C15  C10   SING  N  N  11  
XWY  C11  C10   SING  N  N  12  
XWY  C11  O12   SING  N  N  13  
XWY  C18  C19   SING  Y  N  14  
XWY  C18  C17   SING  N  N  15  
XWY  C10  N09   SING  N  N  16  
XWY  N16  C17   DOUB  Y  N  17  
XWY  N16  C08   SING  Y  N  18  
XWY  O12  C13   SING  N  N  19  
XWY  C17  N28   SING  Y  N  20  
XWY  N09  C08   SING  N  N  21  
XWY  N09  C14   SING  N  N  22  
XWY  C08  C07   DOUB  Y  N  23  
XWY  C13  C14   SING  N  N  24  
XWY  N28  C06   DOUB  Y  N  25  
XWY  C07  C06   SING  Y  N  26  
XWY  C06  C03   SING  N  N  27  
XWY  O30  S02   DOUB  N  N  28  
XWY  C29  S02   SING  N  N  29  
XWY  S02  C03   SING  N  N  30  
XWY  S02  N01   DOUB  N  N  31  
XWY  C03  C05   SING  N  N  32  
XWY  C03  C04   SING  N  N  33  
XWY  C05  C04   SING  N  N  34  
XWY  C10  H101  SING  N  N  35  
XWY  C13  H131  SING  N  N  36  
XWY  C13  H132  SING  N  N  37  
XWY  C15  H152  SING  N  N  38  
XWY  C15  H153  SING  N  N  39  
XWY  C15  H151  SING  N  N  40  
XWY  C20  H201  SING  N  N  41  
XWY  C21  H211  SING  N  N  42  
XWY  C24  H241  SING  N  N  43  
XWY  C26  H261  SING  N  N  44  
XWY  C04  H041  SING  N  N  45  
XWY  C04  H042  SING  N  N  46  
XWY  C05  H052  SING  N  N  47  
XWY  C05  H051  SING  N  N  48  
XWY  C07  H071  SING  N  N  49  
XWY  C11  H111  SING  N  N  50  
XWY  C11  H112  SING  N  N  51  
XWY  C14  H141  SING  N  N  52  
XWY  C14  H142  SING  N  N  53  
XWY  C19  H191  SING  N  N  54  
XWY  C25  H251  SING  N  N  55  
XWY  C27  H271  SING  N  N  56  
XWY  C29  H292  SING  N  N  57  
XWY  C29  H293  SING  N  N  58  
XWY  C29  H291  SING  N  N  59  
XWY  N01  H011  SING  N  N  60  
#   #
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
XWY  SMILES            ACDLabs               12.01  "C5(N(c4cc(C1(CC1)S(C)(=N)=O)nc(c3cccc2c3cccc2)n4)CCOC5)C"  
XWY  InChI             InChI                 1.03   "InChI=1S/C23H26N4O2S/c1-16-15-29-13-12-27(16)21-14-20(23(10-11-23)30(2,24)28)25-22(26-21)19-9-5-7-17-6-3-4-8-18(17)19/h3-9,14,16,24H,10-13,15H2,1-2H3/t16-,30-/m1/s1"  
XWY  InChIKey          InChI                 1.03   GOXNOBRASUTVOC-XHDOVSQSSA-N  
XWY  SMILES_CANONICAL  CACTVS                3.385  "C[C@@H]1COCCN1c2cc(nc(n2)c3cccc4ccccc34)C5(CC5)[S@](C)(=N)=O"  
XWY  SMILES            CACTVS                3.385  "C[CH]1COCCN1c2cc(nc(n2)c3cccc4ccccc34)C5(CC5)[S](C)(=N)=O"  
XWY  SMILES_CANONICAL  "OpenEye OEToolkits"  2.0.7  "C[C@@H]1COCCN1c2cc(nc(n2)c3cccc4c3cccc4)C5(CC5)[S@](=N)(=O)C"  
XWY  SMILES            "OpenEye OEToolkits"  2.0.7  "CC1COCCN1c2cc(nc(n2)c3cccc4c3cccc4)C5(CC5)S(=N)(=O)C"  
#   #
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
XWY  "SYSTEMATIC NAME"  ACDLabs               12.01  "(3R)-3-methyl-4-{6-[1-(S-methylsulfonimidoyl)cyclopropyl]-2-(naphthalen-1-yl)pyrimidin-4-yl}morpholine"  
XWY  "SYSTEMATIC NAME"  "OpenEye OEToolkits"  2.0.7  "azanylidene-methyl-[1-[6-[(3~{R})-3-methylmorpholin-4-yl]-2-naphthalen-1-yl-pyrimidin-4-yl]cyclopropyl]-oxidanylidene-$l^{6}-sulfane"  
#   #
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
XWY  "Create component"  2021-01-18  RCSB  
XWY  "Initial release"   2021-07-14  RCSB  
##
