data_V6Y
#

_chem_comp.id                                   V6Y
_chem_comp.name                                 "3-(3-{[3-(4-carboxyphenoxy)phenyl]methoxy}phenyl)-1H-indole-2-carboxylic acid"
_chem_comp.type                                 non-polymer
_chem_comp.pdbx_type                            HETAIN
_chem_comp.formula                              "C29 H21 N O6"
_chem_comp.mon_nstd_parent_comp_id              ?
_chem_comp.pdbx_synonyms                        ?
_chem_comp.pdbx_formal_charge                   0
_chem_comp.pdbx_initial_date                    2020-07-09
_chem_comp.pdbx_modified_date                   2021-07-09
_chem_comp.pdbx_ambiguous_flag                  N
_chem_comp.pdbx_release_status                  REL
_chem_comp.pdbx_replaced_by                     ?
_chem_comp.pdbx_replaces                        ?
_chem_comp.formula_weight                       479.480
_chem_comp.one_letter_code                      ?
_chem_comp.three_letter_code                    V6Y
_chem_comp.pdbx_model_coordinates_details       ?
_chem_comp.pdbx_model_coordinates_missing_flag  N
_chem_comp.pdbx_ideal_coordinates_details       Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag  N
_chem_comp.pdbx_model_coordinates_db_code       6XQ3
_chem_comp.pdbx_subcomponent_list               ?
_chem_comp.pdbx_processing_site                 RCSB
#   #
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
V6Y  C01  C1   C  0  1  Y  N  N  -49.982  -6.629  28.112    8.025   3.009   1.502  C01  V6Y   1  
V6Y  C02  C2   C  0  1  Y  N  N  -50.495  -5.550  28.802    7.950   2.710   0.161  C02  V6Y   2  
V6Y  C03  C3   C  0  1  Y  N  N  -49.763  -4.373  28.789    7.039   1.756  -0.288  C03  V6Y   3  
V6Y  C04  C4   C  0  1  Y  N  N  -48.561  -4.276  28.105    6.206   1.111   0.645  C04  V6Y   4  
V6Y  C05  C5   C  0  1  Y  N  N  -48.064  -5.389  27.421    6.299   1.431   2.002  C05  V6Y   5  
V6Y  C06  C6   C  0  1  Y  N  N  -48.782  -6.570  27.419    7.203   2.365   2.419  C06  V6Y   6  
V6Y  C08  C7   C  0  1  Y  N  N  -48.984  -2.348  29.057    5.744   0.312  -1.445  C08  V6Y   7  
V6Y  C09  C8   C  0  1  Y  N  N  -48.053  -3.037  28.271    5.371   0.177  -0.119  C09  V6Y   8  
V6Y  C10  C9   C  0  1  Y  N  N  -46.706  -2.564  27.658    4.335  -0.730   0.421  C10  V6Y   9  
V6Y  C11  C10  C  0  1  Y  N  N  -46.601  -1.246  27.233    2.996  -0.550   0.074  C11  V6Y  10  
V6Y  C12  C11  C  0  1  Y  N  N  -45.430  -0.745  26.669    2.032  -1.403   0.583  C12  V6Y  11  
V6Y  C13  C12  C  0  1  Y  N  N  -44.325  -1.584  26.499    2.398  -2.434   1.437  C13  V6Y  12  
V6Y  C14  C13  C  0  1  Y  N  N  -44.393  -2.931  26.925    3.725  -2.615   1.783  C14  V6Y  13  
V6Y  C15  C14  C  0  1  Y  N  N  -45.565  -3.426  27.528    4.694  -1.774   1.275  C15  V6Y  14  
V6Y  C16  C15  C  0  1  N  N  N  -48.995  -0.905  29.585    5.171  -0.430  -2.570  C16  V6Y  15  
V6Y  C20  C16  C  0  1  Y  N  N  -43.115   1.373  26.622   -1.601  -1.802   0.328  C20  V6Y  16  
V6Y  C21  C17  C  0  1  Y  N  N  -43.381   1.783  27.920   -2.090  -2.371  -0.833  C21  V6Y  17  
V6Y  C22  C18  C  0  1  Y  N  N  -42.328   2.045  28.802   -3.363  -2.061  -1.275  C22  V6Y  18  
V6Y  C23  C19  C  0  1  Y  N  N  -41.008   1.902  28.380   -4.150  -1.182  -0.555  C23  V6Y  19  
V6Y  C24  C20  C  0  1  Y  N  N  -40.741   1.489  27.078   -3.662  -0.610   0.610  C24  V6Y  20  
V6Y  C25  C21  C  0  1  Y  N  N  -41.791   1.228  26.202   -2.383  -0.923   1.051  C25  V6Y  21  
V6Y  C27  C22  C  0  1  Y  N  N  -38.961   0.043  26.557   -5.680   0.523   0.857  C27  V6Y  22  
V6Y  C28  C23  C  0  1  Y  N  N  -39.546  -0.948  27.331   -6.754  -0.260   1.266  C28  V6Y  23  
V6Y  C29  C24  C  0  1  Y  N  N  -39.050  -2.211  27.225   -8.021   0.009   0.798  C29  V6Y  24  
V6Y  C30  C25  C  0  1  Y  N  N  -37.989  -2.492  26.322   -8.227   1.069  -0.089  C30  V6Y  25  
V6Y  C31  C26  C  0  1  Y  N  N  -37.420  -1.501  25.537   -7.144   1.854  -0.497  C31  V6Y  26  
V6Y  C32  C27  C  0  1  Y  N  N  -37.907  -0.229  25.691   -5.881   1.582  -0.021  C32  V6Y  27  
V6Y  C33  C28  C  0  1  N  N  N  -44.261   1.080  25.634   -0.215  -2.147   0.810  C33  V6Y  28  
V6Y  C34  C29  C  0  1  N  N  N  -37.450  -3.897  26.207   -9.582   1.360  -0.592  C34  V6Y  29  
V6Y  N07  N1   N  0  1  Y  N  N  -50.009  -3.185  29.362    6.743   1.260  -1.535  N07  V6Y  30  
V6Y  O17  O1   O  0  1  N  N  N  -50.095  -0.349  29.856    5.621  -0.210  -3.823  O17  V6Y  31  
V6Y  O18  O2   O  0  1  N  N  N  -47.941  -0.258  29.760    4.290  -1.246  -2.375  O18  V6Y  32  
V6Y  O19  O3   O  0  1  N  N  N  -45.420   0.612  26.281    0.726  -1.230   0.248  O19  V6Y  33  
V6Y  O26  O4   O  0  1  N  N  N  -39.418   1.357  26.628   -4.433   0.255   1.319  O26  V6Y  34  
V6Y  O35  O5   O  0  1  N  N  N  -38.254  -4.776  26.267   -9.778   2.383  -1.447  O35  V6Y  35  
V6Y  O36  O6   O  0  1  N  N  N  -36.230  -4.246  26.082  -10.522   0.677  -0.236  O36  V6Y  36  
V6Y  H1   H1   H  0  1  N  N  N  -50.536  -7.556  28.111    8.732   3.749   1.846  H1   V6Y  37  
V6Y  H2   H2   H  0  1  N  N  N  -51.433  -5.620  29.333    8.596   3.214  -0.543  H2   V6Y  38  
V6Y  H3   H3   H  0  1  N  N  N  -47.122  -5.326  26.896    5.660   0.938   2.720  H3   V6Y  39  
V6Y  H4   H4   H  0  1  N  N  N  -48.414  -7.434  26.886    7.275   2.612   3.468  H4   V6Y  40  
V6Y  H5   H5   H  0  1  N  N  N  -47.452  -0.590  27.343    2.712   0.254  -0.590  H5   V6Y  41  
V6Y  H6   H6   H  0  1  N  N  N  -43.422  -1.205  26.044    1.644  -3.098   1.834  H6   V6Y  42  
V6Y  H7   H7   H  0  1  N  N  N  -43.543  -3.582  26.787    4.004  -3.419   2.448  H7   V6Y  43  
V6Y  H8   H8   H  0  1  N  N  N  -45.605  -4.443  27.889    5.730  -1.918   1.547  H8   V6Y  44  
V6Y  H9   H9   H  0  1  N  N  N  -44.403   1.900  28.250   -1.477  -3.058  -1.397  H9   V6Y  45  
V6Y  H10  H10  H  0  1  N  N  N  -42.539   2.359  29.814   -3.743  -2.506  -2.182  H10  V6Y  46  
V6Y  H11  H11  H  0  1  N  N  N  -40.195   2.111  29.060   -5.144  -0.940  -0.901  H11  V6Y  47  
V6Y  H12  H12  H  0  1  N  N  N  -41.580   0.911  25.191   -2.001  -0.479   1.958  H12  V6Y  48  
V6Y  H13  H13  H  0  1  N  N  N  -40.368  -0.725  27.996   -6.595  -1.079   1.951  H13  V6Y  49  
V6Y  H14  H14  H  0  1  N  N  N  -39.465  -3.004  27.830   -8.855  -0.600   1.116  H14  V6Y  50  
V6Y  H15  H15  H  0  1  N  N  N  -36.629  -1.721  24.836   -7.299   2.677  -1.179  H15  V6Y  51  
V6Y  H16  H16  H  0  1  N  N  N  -37.463   0.579  25.128   -5.044   2.188  -0.336  H16  V6Y  52  
V6Y  H17  H17  H  0  1  N  N  N  -43.923   0.316  24.918   -0.181  -2.081   1.897  H17  V6Y  53  
V6Y  H18  H18  H  0  1  N  N  N  -44.507   2.006  25.094    0.036  -3.161   0.499  H18  V6Y  54  
V6Y  H19  H19  H  0  1  N  N  N  -50.808  -2.956  29.917    7.174   1.536  -2.359  H19  V6Y  55  
V6Y  H20  H20  H  0  1  N  N  N  -49.935   0.533  30.171    5.183  -0.746  -4.498  H20  V6Y  56  
V6Y  H21  H21  H  0  1  N  N  N  -37.812  -5.615  26.207  -10.684   2.535  -1.750  H21  V6Y  57  
#   #
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
V6Y  C31  C32  DOUB  Y  N   1  
V6Y  C31  C30  SING  Y  N   2  
V6Y  C33  O19  SING  N  N   3  
V6Y  C33  C20  SING  N  N   4  
V6Y  C32  C27  SING  Y  N   5  
V6Y  O36  C34  DOUB  N  N   6  
V6Y  C25  C20  DOUB  Y  N   7  
V6Y  C25  C24  SING  Y  N   8  
V6Y  C34  O35  SING  N  N   9  
V6Y  C34  C30  SING  N  N  10  
V6Y  O19  C12  SING  N  N  11  
V6Y  C30  C29  DOUB  Y  N  12  
V6Y  C13  C12  DOUB  Y  N  13  
V6Y  C13  C14  SING  Y  N  14  
V6Y  C27  O26  SING  N  N  15  
V6Y  C27  C28  DOUB  Y  N  16  
V6Y  C20  C21  SING  Y  N  17  
V6Y  O26  C24  SING  N  N  18  
V6Y  C12  C11  SING  Y  N  19  
V6Y  C14  C15  DOUB  Y  N  20  
V6Y  C24  C23  DOUB  Y  N  21  
V6Y  C29  C28  SING  Y  N  22  
V6Y  C11  C10  DOUB  Y  N  23  
V6Y  C06  C05  DOUB  Y  N  24  
V6Y  C06  C01  SING  Y  N  25  
V6Y  C05  C04  SING  Y  N  26  
V6Y  C15  C10  SING  Y  N  27  
V6Y  C10  C09  SING  N  N  28  
V6Y  C21  C22  DOUB  Y  N  29  
V6Y  C04  C09  SING  Y  N  30  
V6Y  C04  C03  DOUB  Y  N  31  
V6Y  C01  C02  DOUB  Y  N  32  
V6Y  C09  C08  DOUB  Y  N  33  
V6Y  C23  C22  SING  Y  N  34  
V6Y  C03  C02  SING  Y  N  35  
V6Y  C03  N07  SING  Y  N  36  
V6Y  C08  N07  SING  Y  N  37  
V6Y  C08  C16  SING  N  N  38  
V6Y  C16  O18  DOUB  N  N  39  
V6Y  C16  O17  SING  N  N  40  
V6Y  C01  H1   SING  N  N  41  
V6Y  C02  H2   SING  N  N  42  
V6Y  C05  H3   SING  N  N  43  
V6Y  C06  H4   SING  N  N  44  
V6Y  C11  H5   SING  N  N  45  
V6Y  C13  H6   SING  N  N  46  
V6Y  C14  H7   SING  N  N  47  
V6Y  C15  H8   SING  N  N  48  
V6Y  C21  H9   SING  N  N  49  
V6Y  C22  H10  SING  N  N  50  
V6Y  C23  H11  SING  N  N  51  
V6Y  C25  H12  SING  N  N  52  
V6Y  C28  H13  SING  N  N  53  
V6Y  C29  H14  SING  N  N  54  
V6Y  C31  H15  SING  N  N  55  
V6Y  C32  H16  SING  N  N  56  
V6Y  C33  H17  SING  N  N  57  
V6Y  C33  H18  SING  N  N  58  
V6Y  N07  H19  SING  N  N  59  
V6Y  O17  H20  SING  N  N  60  
V6Y  O35  H21  SING  N  N  61  
#   #
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
V6Y  SMILES            ACDLabs               12.01  "c2cc1nc(C(=O)O)c(c1cc2)c3cc(ccc3)OCc4cccc(c4)Oc5ccc(cc5)C(O)=O"  
V6Y  InChI             InChI                 1.03   "InChI=1S/C29H21NO6/c31-28(32)19-11-13-21(14-12-19)36-23-8-3-5-18(15-23)17-35-22-7-4-6-20(16-22)26-24-9-1-2-10-25(24)30-27(26)29(33)34/h1-16,30H,17H2,(H,31,32)(H,33,34)"  
V6Y  InChIKey          InChI                 1.03   PSBGQCWQSZIAEZ-UHFFFAOYSA-N  
V6Y  SMILES_CANONICAL  CACTVS                3.385  "OC(=O)c1[nH]c2ccccc2c1c3cccc(OCc4cccc(Oc5ccc(cc5)C(O)=O)c4)c3"  
V6Y  SMILES            CACTVS                3.385  "OC(=O)c1[nH]c2ccccc2c1c3cccc(OCc4cccc(Oc5ccc(cc5)C(O)=O)c4)c3"  
V6Y  SMILES_CANONICAL  "OpenEye OEToolkits"  2.0.7  "c1ccc2c(c1)c(c([nH]2)C(=O)O)c3cccc(c3)OCc4cccc(c4)Oc5ccc(cc5)C(=O)O"  
V6Y  SMILES            "OpenEye OEToolkits"  2.0.7  "c1ccc2c(c1)c(c([nH]2)C(=O)O)c3cccc(c3)OCc4cccc(c4)Oc5ccc(cc5)C(=O)O"  
#   #
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
V6Y  "SYSTEMATIC NAME"  ACDLabs               12.01  "3-(3-{[3-(4-carboxyphenoxy)phenyl]methoxy}phenyl)-1H-indole-2-carboxylic acid"  
V6Y  "SYSTEMATIC NAME"  "OpenEye OEToolkits"  2.0.7  "3-[3-[[3-(4-carboxyphenoxy)phenyl]methoxy]phenyl]-1~{H}-indole-2-carboxylic acid"  
#   #
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
V6Y  "Create component"  2020-07-09  RCSB  
V6Y  "Initial release"   2021-07-14  RCSB  
##
