data_UBY
# 
_chem_comp.id                                    UBY 
_chem_comp.name                                  "N-[(S)-({[(benzyloxy)carbonyl]amino}methyl)(hydroxy)phosphoryl]-L-leucyl-L-alanine" 
_chem_comp.type                                  peptide-like 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C18 H28 N3 O7 P" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2011-08-03 
_chem_comp.pdbx_modified_date                    2012-07-27 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        429.405 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     UBY 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        3T74 
_chem_comp.pdbx_subcomponent_list                "PHQ PGL LEU ALA" 
_chem_comp.pdbx_processing_site                  RCSB 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
UBY C3   C3   C 0 1 Y N N 15.133 -40.707 12.650 -7.755  -0.739 0.332  C1   PHQ 1  
UBY C2   C2   C 0 1 Y N N 16.363 -40.264 13.140 -8.982  -0.345 -0.168 C2   PHQ 2  
UBY C1   C1   C 0 1 Y N N 17.520 -40.371 12.370 -9.106  0.005  -1.500 C3   PHQ 3  
UBY C6   C6   C 0 1 Y N N 17.429 -40.952 11.099 -8.002  -0.039 -2.332 C4   PHQ 4  
UBY C5   C5   C 0 1 Y N N 16.197 -41.387 10.602 -6.775  -0.433 -1.831 C5   PHQ 5  
UBY C4   C4   C 0 1 Y N N 15.046 -41.256 11.378 -6.650  -0.777 -0.498 C6   PHQ 6  
UBY C7   C7   C 0 1 N N N 13.720 -41.750 10.867 -5.313  -1.207 0.047  C7   PHQ 7  
UBY O8   O8   O 0 1 N N N 12.969 -40.801 10.119 -4.591  -0.044 0.531  O12  PHQ 8  
UBY C9   C9   C 0 1 N N N 12.981 -40.928 8.705  -3.369  -0.257 1.053  C14  PHQ 9  
UBY O21  O21  O 0 1 N N N 13.744 -41.732 8.162  -2.918  -1.384 1.104  O15  PHQ 10 
UBY N10  N10  N 0 1 N N N 12.170 -40.120 8.080  -2.645  0.780  1.520  N    PGL 11 
UBY C11  C11  C 0 1 N N N 12.039 -40.137 6.646  -1.315  0.549  2.089  C    PGL 12 
UBY P12  P12  P 0 1 N N N 11.537 -38.538 5.972  -0.051  0.809  0.803  P    PGL 13 
UBY O22  O22  O 0 1 N N N 12.618 -37.559 6.228  -0.137  2.199  0.300  O1   PGL 14 
UBY O23  O23  O 0 1 N N N 10.193 -38.104 6.540  -0.301  -0.217 -0.412 O2   PGL 15 
UBY N13  N13  N 0 1 N N N 11.335 -38.866 4.361  1.477   0.543  1.456  N    LEU 16 
UBY C14  C14  C 0 1 N N S 10.154 -38.419 3.632  2.516   0.632  0.420  CA   LEU 17 
UBY C15  C15  C 0 1 N N N 8.954  -39.292 3.857  3.609   -0.361 0.719  C    LEU 18 
UBY O24  O24  O 0 1 N N N 7.813  -38.805 3.898  3.667   -0.890 1.809  O    LEU 19 
UBY C20  C20  C 0 1 N N N 10.501 -38.460 2.138  3.101   2.045  0.405  CB   LEU 20 
UBY C21  C21  C 0 1 N N N 9.402  -37.935 1.225  4.078   2.179  -0.765 CG   LEU 21 
UBY C22  C22  C 0 1 N N N 9.642  -38.337 -0.224 3.310   2.090  -2.085 CD1  LEU 22 
UBY C23  C23  C 0 1 N N N 9.215  -36.427 1.372  4.792   3.530  -0.681 CD2  LEU 23 
UBY N16  N16  N 0 1 N N N 9.179  -40.605 3.952  4.522   -0.663 -0.226 N    ALA 24 
UBY C17  C17  C 0 1 N N S 8.121  -41.611 4.078  5.519   -1.707 0.026  CA   ALA 25 
UBY C18  C18  C 0 1 N N N 8.288  -42.468 5.302  6.735   -1.456 -0.828 C    ALA 26 
UBY O32  O32  O 0 1 N N N 7.272  -43.079 5.706  6.766   -0.503 -1.571 O    ALA 27 
UBY C25  C25  C 0 1 N N N 8.152  -42.499 2.829  4.925   -3.073 -0.321 CB   ALA 28 
UBY O19  O19  O 0 1 N N N 9.415  -42.555 5.836  7.784   -2.291 -0.764 OXT  ALA 29 
UBY H3   H3   H 0 1 N N N 14.247 -40.622 13.262 -7.659  -1.012 1.372  H1   PHQ 30 
UBY H2   H2   H 0 1 N N N 16.419 -39.833 14.129 -9.844  -0.310 0.481  H2   PHQ 31 
UBY H1   H1   H 0 1 N N N 18.467 -40.013 12.746 -10.064 0.313  -1.891 H3   PHQ 32 
UBY H6   H6   H 0 1 N N N 18.319 -41.065 10.497 -8.099  0.234  -3.372 H4   PHQ 33 
UBY H5   H5   H 0 1 N N N 16.137 -41.825 9.617  -5.912  -0.463 -2.480 H5   PHQ 34 
UBY H7   H7   H 0 1 N N N 13.916 -42.611 10.211 -5.464  -1.908 0.868  H71  PHQ 35 
UBY H7A  H7A  H 0 1 N N N 13.115 -42.041 11.738 -4.737  -1.690 -0.742 H72  PHQ 36 
UBY HN10 HN10 H 0 0 N N N 11.625 -39.471 8.611  -3.006  1.680  1.480  HN1  PGL 37 
UBY H11  H11  H 0 1 N N N 13.013 -40.407 6.212  -1.146  1.244  2.911  H1   PGL 38 
UBY H11A H11A H 0 0 N N N 11.277 -40.882 6.376  -1.252  -0.474 2.459  H2   PGL 39 
UBY HO23 HO23 H 0 0 N N N 10.287 -37.261 6.969  -0.259  -1.148 -0.155 HO2  PGL 40 
UBY HN13 HN13 H 0 0 N N N 12.113 -38.439 3.900  1.665   1.186  2.211  H    LEU 41 
UBY H14  H14  H 0 1 N N N 9.893  -37.412 3.989  2.078   0.409  -0.553 HA   LEU 42 
UBY H20  H20  H 0 1 N N N 11.396 -37.839 1.982  2.296   2.771  0.290  HB2  LEU 43 
UBY H20A H20A H 0 0 N N N 10.696 -39.508 1.865  3.627   2.231  1.341  HB3  LEU 44 
UBY H21  H21  H 0 1 N N N 8.460  -38.406 1.543  4.814   1.376  -0.718 HG   LEU 45 
UBY H22  H22  H 0 1 N N N 8.831  -37.942 -0.854 4.014   2.111  -2.917 HD11 LEU 46 
UBY H22A H22A H 0 0 N N N 10.604 -37.925 -0.564 2.742   1.160  -2.112 HD12 LEU 47 
UBY H22B H22B H 0 0 N N N 9.665  -39.434 -0.301 2.626   2.935  -2.165 HD13 LEU 48 
UBY H23  H23  H 0 1 N N N 8.415  -36.089 0.698  5.340   3.594  0.260  HD21 LEU 49 
UBY H23A H23A H 0 0 N N N 8.943  -36.191 2.411  5.489   3.626  -1.514 HD22 LEU 50 
UBY H23B H23B H 0 0 N N N 10.153 -35.914 1.113  4.057   4.333  -0.728 HD23 LEU 51 
UBY HN16 HN16 H 0 0 N N N 10.128 -40.921 3.936  4.519   -0.189 -1.072 H    ALA 52 
UBY H17  H17  H 0 1 N N N 7.158  -41.089 4.176  5.804   -1.691 1.078  HA   ALA 53 
UBY H25  H25  H 0 1 N N N 7.364  -43.263 2.902  5.666   -3.850 -0.134 HB1  ALA 54 
UBY H25A H25A H 0 0 N N N 7.981  -41.881 1.935  4.045   -3.254 0.297  HB2  ALA 55 
UBY H25B H25B H 0 0 N N N 9.133  -42.990 2.753  4.640   -3.089 -1.373 HB3  ALA 56 
UBY HO19 HO19 H 0 0 N N N 9.369  -43.146 6.578  8.541   -2.089 -1.331 HXT  ALA 57 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
UBY C6  C1   DOUB Y N 1  
UBY C1  C2   SING Y N 2  
UBY C1  H1   SING N N 3  
UBY C3  C2   DOUB Y N 4  
UBY C2  H2   SING N N 5  
UBY C4  C3   SING Y N 6  
UBY C3  H3   SING N N 7  
UBY C5  C4   DOUB Y N 8  
UBY C7  C4   SING N N 9  
UBY C5  C6   SING Y N 10 
UBY C5  H5   SING N N 11 
UBY C6  H6   SING N N 12 
UBY O8  C7   SING N N 13 
UBY C7  H7   SING N N 14 
UBY C7  H7A  SING N N 15 
UBY C9  O8   SING N N 16 
UBY N10 C9   SING N N 17 
UBY O21 C9   DOUB N N 18 
UBY C11 N10  SING N N 19 
UBY N10 HN10 SING N N 20 
UBY P12 C11  SING N N 21 
UBY C11 H11  SING N N 22 
UBY C11 H11A SING N N 23 
UBY N13 P12  SING N N 24 
UBY P12 O22  DOUB N N 25 
UBY P12 O23  SING N N 26 
UBY C14 N13  SING N N 27 
UBY N13 HN13 SING N N 28 
UBY C20 C14  SING N N 29 
UBY C14 C15  SING N N 30 
UBY C14 H14  SING N N 31 
UBY C15 O24  DOUB N N 32 
UBY C15 N16  SING N N 33 
UBY N16 C17  SING N N 34 
UBY N16 HN16 SING N N 35 
UBY C25 C17  SING N N 36 
UBY C17 C18  SING N N 37 
UBY C17 H17  SING N N 38 
UBY C18 O32  DOUB N N 39 
UBY C18 O19  SING N N 40 
UBY O19 HO19 SING N N 41 
UBY C21 C20  SING N N 42 
UBY C20 H20  SING N N 43 
UBY C20 H20A SING N N 44 
UBY C22 C21  SING N N 45 
UBY C21 C23  SING N N 46 
UBY C21 H21  SING N N 47 
UBY C22 H22  SING N N 48 
UBY C22 H22A SING N N 49 
UBY C22 H22B SING N N 50 
UBY C23 H23  SING N N 51 
UBY C23 H23A SING N N 52 
UBY C23 H23B SING N N 53 
UBY O23 HO23 SING N N 54 
UBY C25 H25  SING N N 55 
UBY C25 H25A SING N N 56 
UBY C25 H25B SING N N 57 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
UBY SMILES           ACDLabs              12.01 "O=C(O)C(NC(=O)C(NP(=O)(O)CNC(=O)OCc1ccccc1)CC(C)C)C"                                                                                                                                        
UBY InChI            InChI                1.03  "InChI=1S/C18H28N3O7P/c1-12(2)9-15(16(22)20-13(3)17(23)24)21-29(26,27)11-19-18(25)28-10-14-7-5-4-6-8-14/h4-8,12-13,15H,9-11H2,1-3H3,(H,19,25)(H,20,22)(H,23,24)(H2,21,26,27)/t13-,15-/m0/s1" 
UBY InChIKey         InChI                1.03  DVNAMUNBHDIPLR-ZFWWWQNUSA-N                                                                                                                                                                  
UBY SMILES_CANONICAL CACTVS               3.370 "CC(C)C[C@H](N[P](O)(=O)CNC(=O)OCc1ccccc1)C(=O)N[C@@H](C)C(O)=O"                                                                                                                             
UBY SMILES           CACTVS               3.370 "CC(C)C[CH](N[P](O)(=O)CNC(=O)OCc1ccccc1)C(=O)N[CH](C)C(O)=O"                                                                                                                                
UBY SMILES_CANONICAL "OpenEye OEToolkits" 1.7.2 "C[C@@H](C(=O)O)NC(=O)[C@H](CC(C)C)NP(=O)(CNC(=O)OCc1ccccc1)O"                                                                                                                               
UBY SMILES           "OpenEye OEToolkits" 1.7.2 "CC(C)CC(C(=O)NC(C)C(=O)O)NP(=O)(CNC(=O)OCc1ccccc1)O"                                                                                                                                        
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
UBY "SYSTEMATIC NAME" ACDLabs              12.01 "N-[(S)-({[(benzyloxy)carbonyl]amino}methyl)(hydroxy)phosphoryl]-L-leucyl-L-alanine"                                   
UBY "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.7.2 "(2S)-2-[[(2S)-4-methyl-2-[[oxidanyl(phenylmethoxycarbonylaminomethyl)phosphoryl]amino]pentanoyl]amino]propanoic acid" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
UBY "Create component" 2011-08-03 RCSB 
# 
