data_T4Y
# 
_chem_comp.id                                    T4Y 
_chem_comp.name                                  "1-{4-[(2-methylphenyl)methyl]-1,4-diazepan-1-yl}ethan-1-one" 
_chem_comp.type                                  non-polymer 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C15 H22 N2 O" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2020-03-16 
_chem_comp.pdbx_modified_date                    2024-09-27 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        246.348 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     T4Y 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        5REY 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  RCSB 
_chem_comp.pdbx_pcm                              Y 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.pdbx_backbone_atom_flag 
_chem_comp_atom.pdbx_n_terminal_atom_flag 
_chem_comp_atom.pdbx_c_terminal_atom_flag 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
T4Y N1  N1  N 0 1 N N N N N N 6.707  -2.888 21.010 -2.674 0.100  -0.605 N1  T4Y 1  
T4Y C4  C1  C 0 1 Y N N N N N 11.282 1.123  24.643 3.860  1.841  0.208  C4  T4Y 2  
T4Y C5  C2  C 0 1 Y N N N N N 10.540 -0.035 24.524 2.765  1.342  0.889  C5  T4Y 3  
T4Y C6  C3  C 0 1 Y N N N N N 10.976 -1.097 23.734 2.334  0.050  0.654  C6  T4Y 4  
T4Y C7  C4  C 0 1 N N N N N N 10.108 -2.327 23.615 1.141  -0.493 1.397  C7  T4Y 5  
T4Y C8  C5  C 0 1 N N N N N N 8.910  -1.501 21.664 -1.063 -1.414 1.039  C8  T4Y 6  
T4Y C10 C6  C 0 1 N N N N N N 6.465  -1.466 21.285 -2.965 -1.347 -0.573 C10 T4Y 7  
T4Y C13 C7  C 0 1 N N N N N N 6.566  -3.381 19.767 -3.611 0.960  -0.160 C13 T4Y 8  
T4Y N   N2  N 0 1 N N N N N N 8.798  -1.984 23.049 -0.012 -0.560 0.489  N   T4Y 9  
T4Y C   C8  C 0 1 N N N N N N 12.723 -2.048 22.132 2.529  -2.152 -0.519 C   T4Y 10 
T4Y O   O1  O 0 1 N N N N N N 5.940  -4.416 19.555 -3.396 2.154  -0.176 O   T4Y 11 
T4Y C1  C9  C 0 1 Y N N N N N 12.179 -0.958 23.020 2.998  -0.744 -0.263 C1  T4Y 12 
T4Y C11 C10 C 0 1 N N N N N N 7.187  -3.740 22.106 -1.417 0.631  -1.093 C11 T4Y 13 
T4Y C12 C11 C 0 1 N N N N N N 7.765  -3.004 23.313 -0.407 0.734  0.075  C12 T4Y 14 
T4Y C14 C12 C 0 1 N N N N N N 7.256  -2.704 18.592 -4.927 0.438  0.359  C14 T4Y 15 
T4Y C2  C13 C 0 1 Y N N N N N 12.910 0.211  23.159 4.093  -0.245 -0.944 C2  T4Y 16 
T4Y C3  C14 C 0 1 Y N N N N N 12.470 1.244  23.962 4.523  1.047  -0.709 C3  T4Y 17 
T4Y C9  C15 C 0 1 N N N N N N 7.737  -0.660 21.242 -1.745 -2.151 -0.093 C9  T4Y 18 
T4Y H5  H1  H 0 1 N N N N N N 10.931 1.930  25.268 4.194  2.852  0.389  H5  T4Y 19 
T4Y H6  H2  H 0 1 N N N N N N 9.603  -0.120 25.054 2.246  1.962  1.605  H6  T4Y 20 
T4Y H8  H3  H 0 1 N N N N N N 10.605 -3.058 22.959 1.368  -1.492 1.769  H8  T4Y 21 
T4Y H7  H4  H 0 1 N N N N N N 9.966  -2.767 24.613 0.906  0.162  2.235  H7  T4Y 22 
T4Y H9  H5  H 0 1 N N N N N N 9.825  -0.897 21.576 -0.624 -2.133 1.730  H9  T4Y 23 
T4Y H10 H6  H 0 1 N N N N N N 8.978  -2.370 20.993 -1.793 -0.800 1.567  H10 T4Y 24 
T4Y H13 H7  H 0 1 N N N N N N 6.016  -1.369 22.285 -3.800 -1.528 0.104  H13 T4Y 25 
T4Y H14 H8  H 0 1 N N N N N N 5.769  -1.072 20.530 -3.240 -1.678 -1.574 H14 T4Y 26 
T4Y H1  H10 H 0 1 N N N N N N 13.367 -2.716 22.723 1.726  -2.139 -1.257 H1  T4Y 27 
T4Y H   H11 H 0 1 N N N N N N 11.889 -2.625 21.707 3.359  -2.749 -0.896 H   T4Y 28 
T4Y H2  H12 H 0 1 N N N N N N 13.311 -1.598 21.318 2.161  -2.588 0.410  H2  T4Y 29 
T4Y H15 H13 H 0 1 N N N N N N 6.341  -4.350 22.455 -1.017 -0.031 -1.861 H15 T4Y 30 
T4Y H16 H14 H 0 1 N N N N N N 7.972  -4.398 21.704 -1.582 1.621  -1.518 H16 T4Y 31 
T4Y H18 H15 H 0 1 N N N N N N 6.930  -2.505 23.827 -0.873 1.255  0.912  H18 T4Y 32 
T4Y H17 H16 H 0 1 N N N N N N 8.208  -3.758 23.980 0.470  1.292  -0.253 H17 T4Y 33 
T4Y H22 H17 H 0 1 N N N N N N 7.075  -3.285 17.676 -4.747 -0.219 1.209  H22 T4Y 34 
T4Y H19 H18 H 0 1 N N N N N N 6.854  -1.688 18.467 -5.551 1.275  0.672  H19 T4Y 35 
T4Y H20 H19 H 0 1 N N N N N N 8.338  -2.650 18.784 -5.433 -0.118 -0.430 H20 T4Y 36 
T4Y H3  H20 H 0 1 N N N N N N 13.844 0.316  22.628 4.611  -0.865 -1.661 H3  T4Y 37 
T4Y H4  H21 H 0 1 N N N N N N 13.058 2.145  24.055 5.376  1.438  -1.244 H4  T4Y 38 
T4Y H11 H22 H 0 1 N N N N N N 7.644  0.199  21.923 -1.045 -2.276 -0.919 H11 T4Y 39 
T4Y H12 H23 H 0 1 N N N N N N 7.902  -0.298 20.216 -2.071 -3.131 0.257  H12 T4Y 40 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
T4Y C1  C   SING N N 1  
T4Y C1  C2  DOUB Y N 2  
T4Y C3  C2  SING Y N 3  
T4Y C4  C3  DOUB Y N 4  
T4Y C5  C4  SING Y N 5  
T4Y C6  C5  DOUB Y N 6  
T4Y C6  C1  SING Y N 7  
T4Y C7  C6  SING N N 8  
T4Y N   C7  SING N N 9  
T4Y C8  N   SING N N 10 
T4Y C9  C8  SING N N 11 
T4Y C10 C9  SING N N 12 
T4Y N1  C10 SING N N 13 
T4Y N1  C11 SING N N 14 
T4Y C11 C12 SING N N 15 
T4Y C12 N   SING N N 16 
T4Y C13 N1  SING N N 17 
T4Y C13 O   DOUB N N 18 
T4Y C14 C13 SING N N 19 
T4Y C4  H5  SING N N 20 
T4Y C5  H6  SING N N 21 
T4Y C7  H8  SING N N 22 
T4Y C7  H7  SING N N 23 
T4Y C8  H9  SING N N 24 
T4Y C8  H10 SING N N 25 
T4Y C10 H13 SING N N 26 
T4Y C10 H14 SING N N 27 
T4Y C   H1  SING N N 28 
T4Y C   H   SING N N 29 
T4Y C   H2  SING N N 30 
T4Y C11 H15 SING N N 31 
T4Y C11 H16 SING N N 32 
T4Y C12 H18 SING N N 33 
T4Y C12 H17 SING N N 34 
T4Y C14 H22 SING N N 35 
T4Y C14 H19 SING N N 36 
T4Y C14 H20 SING N N 37 
T4Y C2  H3  SING N N 38 
T4Y C3  H4  SING N N 39 
T4Y C9  H11 SING N N 40 
T4Y C9  H12 SING N N 41 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
T4Y SMILES           ACDLabs              12.01 "N2(CCCN(Cc1ccccc1C)CC2)C(=O)C"                                                                   
T4Y InChI            InChI                1.03  "InChI=1S/C15H22N2O/c1-13-6-3-4-7-15(13)12-16-8-5-9-17(11-10-16)14(2)18/h3-4,6-7H,5,8-12H2,1-2H3" 
T4Y InChIKey         InChI                1.03  ADMDDIGRGVTLSU-UHFFFAOYSA-N                                                                       
T4Y SMILES_CANONICAL CACTVS               3.385 "CC(=O)N1CCCN(CC1)Cc2ccccc2C"                                                                     
T4Y SMILES           CACTVS               3.385 "CC(=O)N1CCCN(CC1)Cc2ccccc2C"                                                                     
T4Y SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "Cc1ccccc1CN2CCCN(CC2)C(=O)C"                                                                     
T4Y SMILES           "OpenEye OEToolkits" 2.0.7 "Cc1ccccc1CN2CCCN(CC2)C(=O)C"                                                                     
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
T4Y "SYSTEMATIC NAME" ACDLabs              12.01 "1-{4-[(2-methylphenyl)methyl]-1,4-diazepan-1-yl}ethan-1-one" 
T4Y "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 "1-[4-[(2-methylphenyl)methyl]-1,4-diazepan-1-yl]ethanone"    
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
T4Y "Create component" 2020-03-16 RCSB 
T4Y "Initial release"  2020-03-25 RCSB 
T4Y "Modify PCM"       2024-09-27 PDBE 
# 
_pdbx_chem_comp_pcm.pcm_id                             1 
_pdbx_chem_comp_pcm.comp_id                            T4Y 
_pdbx_chem_comp_pcm.modified_residue_id                CYS 
_pdbx_chem_comp_pcm.type                               None 
_pdbx_chem_comp_pcm.category                           "Covalent chemical modification" 
_pdbx_chem_comp_pcm.position                           "Amino-acid side chain" 
_pdbx_chem_comp_pcm.polypeptide_position               "Any position" 
_pdbx_chem_comp_pcm.comp_id_linking_atom               C14 
_pdbx_chem_comp_pcm.modified_residue_id_linking_atom   SG 
_pdbx_chem_comp_pcm.uniprot_specific_ptm_accession     ? 
_pdbx_chem_comp_pcm.uniprot_generic_ptm_accession      ? 
# 
