data_SMY
# 
_chem_comp.id                                    SMY 
_chem_comp.name                                  "(2R)-3-(1H-indol-3-yl)-1-{4-[(5S)-5-methyl-5,7-dihydrothieno[3,4-d]pyrimidin-4-yl]piperazin-1-yl}-1-oxopropan-2-amine" 
_chem_comp.type                                  NON-POLYMER 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C22 H26 N6 O S" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2010-09-20 
_chem_comp.pdbx_modified_date                    2011-06-04 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        422.546 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     SMY 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        3OW3 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  RCSB 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
SMY N1   N1   N 0 1 Y N N 11.182 34.753 36.867 2.782  0.023  -2.087 N1   SMY 1  
SMY C2   C2   C 0 1 Y N N 12.528 34.737 37.006 3.716  0.605  -2.811 C2   SMY 2  
SMY N3   N3   N 0 1 Y N N 13.308 33.655 36.997 4.844  1.012  -2.278 N3   SMY 3  
SMY C4   C4   C 0 1 Y N N 12.684 32.493 36.752 5.106  0.860  -0.974 C4   SMY 4  
SMY C5   C5   C 0 1 Y N N 11.274 32.406 36.612 4.161  0.260  -0.182 C5   SMY 5  
SMY C6   C6   C 0 1 Y N N 10.537 33.606 36.642 2.964  -0.164 -0.788 C6   SMY 6  
SMY C7   C7   C 0 1 N N N 13.441 31.210 36.691 6.380  1.297  -0.266 C7   SMY 7  
SMY S8   S8   S 0 1 N N N 12.044 30.014 36.510 5.904  1.305  1.504  S8   SMY 8  
SMY C9   C9   C 0 1 N N S 10.596 31.065 36.323 4.523  0.118  1.288  C9   SMY 9  
SMY C10  C10  C 0 1 N N N 9.530  30.441 37.311 3.337  0.504  2.175  C10  SMY 10 
SMY N11  N11  N 0 1 N N N 9.177  33.614 36.422 1.979  -0.776 -0.029 N11  SMY 11 
SMY C12  C12  C 0 1 N N N 8.204  33.932 37.414 1.797  -2.177 -0.432 C12  SMY 12 
SMY C13  C13  C 0 1 N N N 7.029  34.590 36.717 0.837  -2.865 0.543  C13  SMY 13 
SMY N14  N14  N 0 1 N N N 6.357  33.836 35.640 -0.400 -2.074 0.618  N14  SMY 14 
SMY C15  C15  C 0 1 N N N 7.222  32.955 34.837 -0.289 -0.631 0.883  C15  SMY 15 
SMY C16  C16  C 0 1 N N N 8.678  32.809 35.294 0.716  -0.031 -0.106 C16  SMY 16 
SMY C17  C17  C 0 1 N N N 5.012  34.059 35.390 -1.605 -2.655 0.447  C17  SMY 17 
SMY O18  O18  O 0 1 N N N 4.366  34.854 36.078 -1.678 -3.845 0.228  O18  SMY 18 
SMY C19  C19  C 0 1 N N R 4.121  33.449 34.295 -2.860 -1.824 0.527  C19  SMY 19 
SMY C20  C20  C 0 1 N N N 3.095  32.472 34.926 -3.070 -1.088 -0.798 C20  SMY 20 
SMY C21  C21  C 0 1 Y N N 3.514  31.116 35.547 -4.254 -0.164 -0.676 C21  SMY 21 
SMY C22  C22  C 0 1 Y N N 2.725  30.354 36.370 -5.519 -0.436 -1.036 C22  SMY 22 
SMY N23  N23  N 0 1 Y N N 3.304  29.148 36.788 -6.319 0.643  -0.777 N23  SMY 23 
SMY C24  C24  C 0 1 Y N N 4.538  29.127 36.212 -5.571 1.661  -0.231 C24  SMY 24 
SMY C25  C25  C 0 1 Y N N 4.721  30.277 35.463 -4.246 1.198  -0.137 C25  SMY 25 
SMY C26  C26  C 0 1 Y N N 5.574  28.166 36.282 -5.876 2.946  0.208  C26  SMY 26 
SMY C27  C27  C 0 1 Y N N 6.815  28.314 35.618 -4.881 3.749  0.720  C27  SMY 27 
SMY C28  C28  C 0 1 Y N N 6.999  29.483 34.851 -3.573 3.289  0.804  C28  SMY 28 
SMY C29  C29  C 0 1 Y N N 5.953  30.442 34.780 -3.254 2.026  0.393  C29  SMY 29 
SMY N30  N30  N 0 1 N N N 3.534  34.635 33.548 -4.010 -2.700 0.788  N30  SMY 30 
SMY H2   H2   H 0 1 N N N 13.017 35.691 37.137 3.549  0.750  -3.868 H2   SMY 31 
SMY H7   H7   H 0 1 N N N 14.144 31.172 35.846 7.183  0.582  -0.444 H7   SMY 32 
SMY H7A  H7A  H 0 1 N N N 14.041 31.028 37.595 6.675  2.295  -0.588 H7A  SMY 33 
SMY H9   H9   H 0 1 N N N 10.015 31.169 35.395 4.852  -0.898 1.507  H9   SMY 34 
SMY H10  H10  H 0 1 N N N 9.175  29.481 36.909 2.530  -0.214 2.034  H10  SMY 35 
SMY H10A H10A H 0 0 N N N 9.994  30.277 38.295 3.648  0.502  3.220  H10A SMY 36 
SMY H10B H10B H 0 0 N N N 8.680  31.131 37.416 2.989  1.500  1.902  H10B SMY 37 
SMY H12  H12  H 0 1 N N N 7.874  33.016 37.925 1.382  -2.214 -1.439 H12  SMY 38 
SMY H12A H12A H 0 0 N N N 8.634  34.619 38.157 2.760  -2.688 -0.417 H12A SMY 39 
SMY H13  H13  H 0 1 N N N 6.270  34.785 37.489 0.608  -3.869 0.185  H13  SMY 40 
SMY H13A H13A H 0 0 N N N 7.407  35.519 36.266 1.295  -2.922 1.530  H13A SMY 41 
SMY H15  H15  H 0 1 N N N 6.773  31.951 34.863 -1.262 -0.158 0.749  H15  SMY 42 
SMY H15A H15A H 0 0 N N N 7.243  33.366 33.817 0.062  -0.473 1.903  H15A SMY 43 
SMY H16  H16  H 0 1 N N N 9.299  33.079 34.427 0.894  1.015  0.147  H16  SMY 44 
SMY H16A H16A H 0 0 N N N 8.801  31.757 35.591 0.315  -0.098 -1.117 H16A SMY 45 
SMY H19  H19  H 0 1 N N N 4.660  32.819 33.573 -2.765 -1.099 1.335  H19  SMY 46 
SMY H20  H20  H 0 1 N N N 2.622  33.034 35.745 -2.179 -0.506 -1.035 H20  SMY 47 
SMY H20A H20A H 0 0 N N N 2.397  32.218 34.115 -3.253 -1.812 -1.591 H20A SMY 48 
SMY H22  H22  H 0 1 N N N 1.734  30.659 36.673 -5.854 -1.367 -1.467 H22  SMY 49 
SMY HN23 HN23 H 0 0 N N N 2.898  28.453 37.381 -7.272 0.685  -0.953 HN23 SMY 50 
SMY H26  H26  H 0 1 N N N 5.410  27.276 36.871 -6.890 3.313  0.146  H26  SMY 51 
SMY H27  H27  H 0 1 N N N 7.588  27.564 35.695 -5.120 4.746  1.059  H27  SMY 52 
SMY H28  H28  H 0 1 N N N 7.926  29.648 34.323 -2.805 3.931  1.208  H28  SMY 53 
SMY H29  H29  H 0 1 N N N 6.102  31.330 34.184 -2.235 1.674  0.463  H29  SMY 54 
SMY HN30 HN30 H 0 0 N N N 2.939  34.306 32.815 -4.120 -3.382 0.052  HN30 SMY 55 
SMY HN3A HN3A H 0 0 N N N 3.003  35.198 34.181 -3.926 -3.149 1.687  HN3A SMY 56 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
SMY N1  C2   DOUB Y N 1  
SMY N1  C6   SING Y N 2  
SMY C2  N3   SING Y N 3  
SMY N3  C4   DOUB Y N 4  
SMY C4  C5   SING Y N 5  
SMY C4  C7   SING N N 6  
SMY C5  C6   DOUB Y N 7  
SMY C5  C9   SING N N 8  
SMY C6  N11  SING N N 9  
SMY C7  S8   SING N N 10 
SMY S8  C9   SING N N 11 
SMY C9  C10  SING N N 12 
SMY N11 C12  SING N N 13 
SMY N11 C16  SING N N 14 
SMY C12 C13  SING N N 15 
SMY C13 N14  SING N N 16 
SMY N14 C15  SING N N 17 
SMY N14 C17  SING N N 18 
SMY C15 C16  SING N N 19 
SMY C17 O18  DOUB N N 20 
SMY C17 C19  SING N N 21 
SMY C19 C20  SING N N 22 
SMY C19 N30  SING N N 23 
SMY C20 C21  SING N N 24 
SMY C21 C22  DOUB Y N 25 
SMY C21 C25  SING Y N 26 
SMY C22 N23  SING Y N 27 
SMY N23 C24  SING Y N 28 
SMY C24 C25  DOUB Y N 29 
SMY C24 C26  SING Y N 30 
SMY C25 C29  SING Y N 31 
SMY C26 C27  DOUB Y N 32 
SMY C27 C28  SING Y N 33 
SMY C28 C29  DOUB Y N 34 
SMY C2  H2   SING N N 35 
SMY C7  H7   SING N N 36 
SMY C7  H7A  SING N N 37 
SMY C9  H9   SING N N 38 
SMY C10 H10  SING N N 39 
SMY C10 H10A SING N N 40 
SMY C10 H10B SING N N 41 
SMY C12 H12  SING N N 42 
SMY C12 H12A SING N N 43 
SMY C13 H13  SING N N 44 
SMY C13 H13A SING N N 45 
SMY C15 H15  SING N N 46 
SMY C15 H15A SING N N 47 
SMY C16 H16  SING N N 48 
SMY C16 H16A SING N N 49 
SMY C19 H19  SING N N 50 
SMY C20 H20  SING N N 51 
SMY C20 H20A SING N N 52 
SMY C22 H22  SING N N 53 
SMY N23 HN23 SING N N 54 
SMY C26 H26  SING N N 55 
SMY C27 H27  SING N N 56 
SMY C28 H28  SING N N 57 
SMY C29 H29  SING N N 58 
SMY N30 HN30 SING N N 59 
SMY N30 HN3A SING N N 60 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
SMY SMILES           ACDLabs              12.01 "O=C(N3CCN(c1ncnc2c1C(SC2)C)CC3)C(N)Cc5c4ccccc4nc5"                                                                                                                         
SMY SMILES_CANONICAL CACTVS               3.370 "C[C@@H]1SCc2ncnc(N3CCN(CC3)C(=O)[C@H](N)Cc4c[nH]c5ccccc45)c12"                                                                                                             
SMY SMILES           CACTVS               3.370 "C[CH]1SCc2ncnc(N3CCN(CC3)C(=O)[CH](N)Cc4c[nH]c5ccccc45)c12"                                                                                                                
SMY SMILES_CANONICAL "OpenEye OEToolkits" 1.7.0 "C[C@H]1c2c(ncnc2N3CCN(CC3)C(=O)[C@@H](Cc4c[nH]c5c4cccc5)N)CS1"                                                                                                             
SMY SMILES           "OpenEye OEToolkits" 1.7.0 "CC1c2c(ncnc2N3CCN(CC3)C(=O)C(Cc4c[nH]c5c4cccc5)N)CS1"                                                                                                                      
SMY InChI            InChI                1.03  "InChI=1S/C22H26N6OS/c1-14-20-19(12-30-14)25-13-26-21(20)27-6-8-28(9-7-27)22(29)17(23)10-15-11-24-18-5-3-2-4-16(15)18/h2-5,11,13-14,17,24H,6-10,12,23H2,1H3/t14-,17+/m0/s1" 
SMY InChIKey         InChI                1.03  JGLUXTFIRPYAQV-WMLDXEAASA-N                                                                                                                                                 
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
SMY "SYSTEMATIC NAME" ACDLabs              12.01 "(2R)-2-amino-3-(1H-indol-3-yl)-1-{4-[(5S)-5-methyl-5,7-dihydrothieno[3,4-d]pyrimidin-4-yl]piperazin-1-yl}propan-1-one"  
SMY "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.7.0 "(2R)-2-azanyl-3-(1H-indol-3-yl)-1-[4-[(5S)-5-methyl-5,7-dihydrothieno[3,4-d]pyrimidin-4-yl]piperazin-1-yl]propan-1-one" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
SMY "Create component"     2010-09-20 RCSB 
SMY "Modify aromatic_flag" 2011-06-04 RCSB 
SMY "Modify descriptor"    2011-06-04 RCSB 
# 
