data_RKY
#

_chem_comp.id                                   RKY
_chem_comp.name                                 "4-(3,4-dihydro-2H-1,5-benzodioxepin-7-yl)-4-oxobutanoic acid"
_chem_comp.type                                 non-polymer
_chem_comp.pdbx_type                            HETAIN
_chem_comp.formula                              "C13 H14 O5"
_chem_comp.mon_nstd_parent_comp_id              ?
_chem_comp.pdbx_synonyms                        ?
_chem_comp.pdbx_formal_charge                   0
_chem_comp.pdbx_initial_date                    2020-02-13
_chem_comp.pdbx_modified_date                   2020-07-10
_chem_comp.pdbx_ambiguous_flag                  N
_chem_comp.pdbx_release_status                  REL
_chem_comp.pdbx_replaced_by                     ?
_chem_comp.pdbx_replaces                        ?
_chem_comp.formula_weight                       250.247
_chem_comp.one_letter_code                      ?
_chem_comp.three_letter_code                    RKY
_chem_comp.pdbx_model_coordinates_details       ?
_chem_comp.pdbx_model_coordinates_missing_flag  N
_chem_comp.pdbx_ideal_coordinates_details       Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag  N
_chem_comp.pdbx_model_coordinates_db_code       6VSF
_chem_comp.pdbx_subcomponent_list               ?
_chem_comp.pdbx_processing_site                 RCSB
#   #
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
RKY  C10  C1   C  0  1  Y  N  N  10.701   6.555  28.661   1.312   1.727  -0.260  C10  RKY   1  
RKY  C13  C2   C  0  1  N  N  N   7.581   5.881  27.064   4.509   1.153   0.687  C13  RKY   2  
RKY  C15  C3   C  0  1  N  N  N   8.057   7.893  25.717   4.179  -1.351   0.649  C15  RKY   3  
RKY  C17  C4   C  0  1  Y  N  N   9.311   8.253  27.695   2.222  -0.503  -0.382  C17  RKY   4  
RKY  O01  O1   O  0  1  N  N  N  14.824  12.671  29.517  -6.407  -0.232   0.250  O01  RKY   5  
RKY  C02  C5   C  0  1  N  N  N  14.453  11.464  29.587  -5.168   0.277   0.172  C02  RKY   6  
RKY  O03  O2   O  0  1  N  N  N  14.403  10.773  28.562  -5.004   1.474   0.185  O03  RKY   7  
RKY  C04  C6   C  0  1  N  N  N  14.069  10.826  30.937  -3.980  -0.645   0.069  C04  RKY   8  
RKY  C05  C7   C  0  1  N  N  N  13.143   9.569  30.794  -2.696   0.184  -0.006  C05  RKY   9  
RKY  C06  C8   C  0  1  N  N  N  11.829   9.946  29.991  -1.508  -0.738  -0.109  C06  RKY  10  
RKY  O07  O3   O  0  1  N  N  N  11.484  11.066  29.952  -1.672  -1.940  -0.122  O07  RKY  11  
RKY  C08  C9   C  0  1  Y  N  N  11.043   8.849  29.228  -0.152  -0.181  -0.195  C08  RKY  12  
RKY  C09  C10  C  0  1  Y  N  N  11.397   7.505  29.350   0.040   1.206  -0.180  C09  RKY  13  
RKY  C11  C11  C  0  1  Y  N  N   9.648   6.920  27.833   2.405   0.876  -0.361  C11  RKY  14  
RKY  O12  O4   O  0  1  N  N  N   8.986   5.875  27.114   3.665   1.388  -0.442  O12  RKY  15  
RKY  C14  C12  C  0  1  N  N  N   7.068   6.833  25.954   5.179  -0.208   0.586  C14  RKY  16  
RKY  O16  O5   O  0  1  N  N  N   8.209   8.693  26.840   3.307  -1.325  -0.483  O16  RKY  17  
RKY  C18  C13  C  0  1  Y  N  N  10.012   9.222  28.406   0.953  -1.037  -0.301  C18  RKY  18  
RKY  H1   H1   H  0  1  N  N  N  10.971   5.514  28.760   1.459   2.797  -0.249  H1   RKY  19  
RKY  H2   H2   H  0  1  N  N  N   7.188   6.216  28.035   5.275   1.928   0.729  H2   RKY  20  
RKY  H3   H3   H  0  1  N  N  N   7.224   4.861  26.856   3.910   1.191   1.596  H3   RKY  21  
RKY  H4   H4   H  0  1  N  N  N   9.025   7.433  25.470   4.718  -2.299   0.664  H4   RKY  22  
RKY  H5   H5   H  0  1  N  N  N   7.721   8.516  24.875   3.587  -1.261   1.559  H5   RKY  23  
RKY  H6   H6   H  0  1  N  N  N  15.027  12.889  28.615  -7.137   0.398   0.315  H6   RKY  24  
RKY  H7   H7   H  0  1  N  N  N  14.991  10.522  31.453  -3.944  -1.292   0.945  H7   RKY  25  
RKY  H8   H8   H  0  1  N  N  N  13.542  11.580  31.541  -4.071  -1.256  -0.830  H8   RKY  26  
RKY  H9   H9   H  0  1  N  N  N  12.866   9.206  31.795  -2.731   0.830  -0.883  H9   RKY  27  
RKY  H10  H10  H  0  1  N  N  N  13.685   8.778  30.254  -2.605   0.794   0.892  H10  RKY  28  
RKY  H11  H11  H  0  1  N  N  N  12.220   7.217  29.988  -0.811   1.867  -0.105  H11  RKY  29  
RKY  H12  H12  H  0  1  N  N  N   6.116   7.285  26.270   5.722  -0.265  -0.358  H12  RKY  30  
RKY  H13  H13  H  0  1  N  N  N   6.913   6.263  25.026   5.889  -0.314   1.406  H13  RKY  31  
RKY  H14  H14  H  0  1  N  N  N   9.745  10.264  28.310   0.812  -2.107  -0.317  H14  RKY  32  
#   #
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
RKY  C15  C14  SING  N  N   1  
RKY  C15  O16  SING  N  N   2  
RKY  C14  C13  SING  N  N   3  
RKY  O16  C17  SING  N  N   4  
RKY  C13  O12  SING  N  N   5  
RKY  O12  C11  SING  N  N   6  
RKY  C17  C11  DOUB  Y  N   7  
RKY  C17  C18  SING  Y  N   8  
RKY  C11  C10  SING  Y  N   9  
RKY  C18  C08  DOUB  Y  N  10  
RKY  O03  C02  DOUB  N  N  11  
RKY  C10  C09  DOUB  Y  N  12  
RKY  C08  C09  SING  Y  N  13  
RKY  C08  C06  SING  N  N  14  
RKY  O01  C02  SING  N  N  15  
RKY  C02  C04  SING  N  N  16  
RKY  O07  C06  DOUB  N  N  17  
RKY  C06  C05  SING  N  N  18  
RKY  C05  C04  SING  N  N  19  
RKY  C10  H1   SING  N  N  20  
RKY  C13  H2   SING  N  N  21  
RKY  C13  H3   SING  N  N  22  
RKY  C15  H4   SING  N  N  23  
RKY  C15  H5   SING  N  N  24  
RKY  O01  H6   SING  N  N  25  
RKY  C04  H7   SING  N  N  26  
RKY  C04  H8   SING  N  N  27  
RKY  C05  H9   SING  N  N  28  
RKY  C05  H10  SING  N  N  29  
RKY  C09  H11  SING  N  N  30  
RKY  C14  H12  SING  N  N  31  
RKY  C14  H13  SING  N  N  32  
RKY  C18  H14  SING  N  N  33  
#   #
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
RKY  SMILES            ACDLabs               12.01  "c1cc(C(CCC(O)=O)=O)cc2c1OCCCO2"  
RKY  InChI             InChI                 1.03   "InChI=1S/C13H14O5/c14-10(3-5-13(15)16)9-2-4-11-12(8-9)18-7-1-6-17-11/h2,4,8H,1,3,5-7H2,(H,15,16)"  
RKY  InChIKey          InChI                 1.03   RQYNFIARXFWNDM-UHFFFAOYSA-N  
RKY  SMILES_CANONICAL  CACTVS                3.385  "OC(=O)CCC(=O)c1ccc2OCCCOc2c1"  
RKY  SMILES            CACTVS                3.385  "OC(=O)CCC(=O)c1ccc2OCCCOc2c1"  
RKY  SMILES_CANONICAL  "OpenEye OEToolkits"  2.0.7  "c1cc2c(cc1C(=O)CCC(=O)O)OCCCO2"  
RKY  SMILES            "OpenEye OEToolkits"  2.0.7  "c1cc2c(cc1C(=O)CCC(=O)O)OCCCO2"  
#   #
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
RKY  "SYSTEMATIC NAME"  ACDLabs               12.01  "4-(3,4-dihydro-2H-1,5-benzodioxepin-7-yl)-4-oxobutanoic acid"  
RKY  "SYSTEMATIC NAME"  "OpenEye OEToolkits"  2.0.7  "4-(3,4-dihydro-2~{H}-1,5-benzodioxepin-7-yl)-4-oxidanylidene-butanoic acid"  
#   #
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
RKY  "Create component"  2020-02-13  RCSB  
RKY  "Initial release"   2020-07-15  RCSB  
##
