data_R5Y
#

_chem_comp.id                                   R5Y
_chem_comp.name                                 "4-[1-(but-3-en-1-yl)-1H-pyrazol-4-yl]-N-[4-(piperidin-4-yl)phenyl]-7H-pyrrolo[2,3-d]pyrimidin-2-amine"
_chem_comp.type                                 non-polymer
_chem_comp.pdbx_type                            HETAIN
_chem_comp.formula                              "C24 H27 N7"
_chem_comp.mon_nstd_parent_comp_id              ?
_chem_comp.pdbx_synonyms                        ?
_chem_comp.pdbx_formal_charge                   0
_chem_comp.pdbx_initial_date                    2020-01-30
_chem_comp.pdbx_modified_date                   2021-02-12
_chem_comp.pdbx_ambiguous_flag                  N
_chem_comp.pdbx_release_status                  REL
_chem_comp.pdbx_replaced_by                     ?
_chem_comp.pdbx_replaces                        ?
_chem_comp.formula_weight                       413.518
_chem_comp.one_letter_code                      ?
_chem_comp.three_letter_code                    R5Y
_chem_comp.pdbx_model_coordinates_details       ?
_chem_comp.pdbx_model_coordinates_missing_flag  N
_chem_comp.pdbx_ideal_coordinates_details       Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag  N
_chem_comp.pdbx_model_coordinates_db_code       6VNM
_chem_comp.pdbx_subcomponent_list               ?
_chem_comp.pdbx_processing_site                 RCSB
#   #
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
R5Y  C10  C1   C  0  1  Y  N  N  44.900  -2.435  -33.330  -2.716   2.192  -1.024  C10  R5Y   1  
R5Y  C13  C2   C  0  1  N  N  N  44.416  -0.477  -36.567  -6.219   1.051  -0.206  C13  R5Y   2  
R5Y  C15  C3   C  0  1  N  N  N  43.607   0.651  -38.648  -8.232   1.077   1.271  C15  R5Y   3  
R5Y  C17  C4   C  0  1  N  N  N  45.884  -0.280  -38.567  -8.193  -0.414  -0.640  C17  R5Y   4  
R5Y  C20  C5   C  0  1  Y  N  N  43.532  -3.727  -34.813  -2.580   0.304   0.459  C20  R5Y   5  
R5Y  C22  C6   C  0  1  Y  N  N  45.994  -3.932  -29.638   2.297  -0.757  -0.070  C22  R5Y   6  
R5Y  C24  C7   C  0  1  Y  N  N  47.526  -2.642  -27.960   4.541   0.326  -0.566  C24  R5Y   7  
R5Y  C26  C8   C  0  1  N  N  N  48.912  -0.924  -26.876   6.982   0.874  -0.647  C26  R5Y   8  
R5Y  C28  C9   C  0  1  N  N  N  46.657  -0.144  -26.022   8.953   2.154   0.147  C28  R5Y   9  
R5Y  C02  C10  C  0  1  Y  N  N  45.709  -6.865  -27.449   1.073  -4.190  -0.086  C02  R5Y  10  
R5Y  C03  C11  C  0  1  Y  N  N  46.237  -5.595  -27.622   2.159  -3.402  -0.025  C03  R5Y  11  
R5Y  C04  C12  C  0  1  Y  N  N  45.810  -5.116  -28.880   1.684  -2.022  -0.087  C04  R5Y  12  
R5Y  C05  C13  C  0  1  Y  N  N  45.035  -6.114  -29.425   0.281  -2.093  -0.186  C05  R5Y  13  
R5Y  C07  C14  C  0  1  Y  N  N  44.666  -4.819  -31.323   0.204   0.212  -0.238  C07  R5Y  14  
R5Y  C09  C15  C  0  1  Y  N  N  44.176  -3.596  -33.591  -1.953   1.288  -0.296  C09  R5Y  15  
R5Y  C11  C16  C  0  1  Y  N  N  44.987  -1.427  -34.280  -4.094   2.114  -0.992  C11  R5Y  16  
R5Y  C12  C17  C  0  1  Y  N  N  44.342  -1.573  -35.500  -4.715   1.133  -0.239  C12  R5Y  17  
R5Y  C14  C18  C  0  1  N  N  N  43.236  -0.165  -37.411  -6.709   1.222   1.235  C14  R5Y  18  
R5Y  C18  C19  C  0  1  N  N  N  45.505  -1.115  -37.345  -6.669  -0.314  -0.733  C18  R5Y  19  
R5Y  C19  C20  C  0  1  Y  N  N  43.615  -2.723  -35.765  -3.958   0.229   0.483  C19  R5Y  20  
R5Y  C23  C21  C  0  1  Y  N  N  46.822  -2.745  -29.137   3.769  -0.630   0.033  C23  R5Y  21  
R5Y  C27  C22  C  0  1  N  N  N  48.047  -0.660  -25.647   7.757   1.347   0.585  C27  R5Y  22  
R5Y  C29  C23  C  0  1  N  N  N  45.589  -0.799  -25.615   9.126   3.369   0.605  C29  R5Y  23  
R5Y  C31  C24  C  0  1  Y  N  N  46.988  -1.551  -29.827   4.630  -1.472   0.766  C31  R5Y  24  
R5Y  N01  N1   N  0  1  Y  N  N  44.994  -7.157  -28.533  -0.057  -3.419  -0.182  N01  R5Y  25  
R5Y  N06  N2   N  0  1  Y  N  N  44.474  -5.937  -30.652  -0.412  -0.959  -0.258  N06  R5Y  26  
R5Y  N08  N3   N  0  1  N  N  N  44.033  -4.697  -32.633  -0.557   1.367  -0.322  N08  R5Y  27  
R5Y  N16  N4   N  0  1  N  N  N  44.703   0.015  -39.416  -8.612  -0.246   0.759  N16  R5Y  28  
R5Y  N21  N5   N  0  1  Y  N  N  45.407  -3.835  -30.823   1.523   0.323  -0.153  N21  R5Y  29  
R5Y  N25  N6   N  0  1  Y  N  N  48.077  -1.449  -27.943   5.820   0.090  -0.221  N25  R5Y  30  
R5Y  N30  N7   N  0  1  Y  N  N  47.764  -0.758  -29.082   5.851  -1.036   0.610  N30  R5Y  31  
R5Y  H1   H1   H  0  1  N  N  N  45.399  -2.318  -32.379  -2.231   2.958  -1.612  H1   R5Y  32  
R5Y  H2   H2   H  0  1  N  N  N  44.789   0.447  -36.102  -6.641   1.840  -0.830  H2   R5Y  33  
R5Y  H3   H3   H  0  1  N  N  N  43.930   1.653  -38.330  -8.583   1.184   2.298  H3   R5Y  34  
R5Y  H4   H4   H  0  1  N  N  N  42.722   0.739  -39.296  -8.685   1.850   0.650  H4   R5Y  35  
R5Y  H5   H5   H  0  1  N  N  N  46.622  -0.836  -39.164  -8.647   0.366  -1.250  H5   R5Y  36  
R5Y  H6   H6   H  0  1  N  N  N  46.326   0.669  -38.228  -8.516  -1.391  -1.001  H6   R5Y  37  
R5Y  H7   H7   H  0  1  N  N  N  42.961  -4.619  -35.024  -1.990  -0.400   1.027  H7   R5Y  38  
R5Y  H8   H8   H  0  1  N  N  N  47.610  -3.399  -27.194   4.189   1.124  -1.204  H8   R5Y  39  
R5Y  H9   H9   H  0  1  N  N  N  49.693  -1.657  -26.626   6.647   1.739  -1.219  H9   R5Y  40  
R5Y  H10  H10  H  0  1  N  N  N  49.382   0.015  -27.204   7.630   0.256  -1.268  H10  R5Y  41  
R5Y  H11  H11  H  0  1  N  N  N  46.552   0.751  -26.617   9.666   1.730  -0.544  H11  R5Y  42  
R5Y  H12  H12  H  0  1  N  N  N  45.852  -7.503  -26.589   1.088  -5.270  -0.062  H12  R5Y  43  
R5Y  H13  H13  H  0  1  N  N  N  46.864  -5.066  -26.919   3.186  -3.727   0.056  H13  R5Y  44  
R5Y  H14  H14  H  0  1  N  N  N  45.555  -0.532  -34.071  -4.688   2.819  -1.554  H14  R5Y  45  
R5Y  H15  H15  H  0  1  N  N  N  42.514   0.410  -36.812  -6.256   0.458   1.866  H15  R5Y  46  
R5Y  H16  H16  H  0  1  N  N  N  42.774  -1.109  -37.736  -6.429   2.210   1.600  H16  R5Y  47  
R5Y  H17  H17  H  0  1  N  N  N  45.170  -2.108  -37.680  -6.360  -0.423  -1.773  H17  R5Y  48  
R5Y  H18  H18  H  0  1  N  N  N  46.389  -1.225  -36.699  -6.215  -1.103  -0.133  H18  R5Y  49  
R5Y  H19  H19  H  0  1  N  N  N  43.113  -2.837  -36.714  -4.447  -0.536   1.069  H19  R5Y  50  
R5Y  H20  H20  H  0  1  N  N  N  47.937  -1.598  -25.083   7.110   1.965   1.207  H20  R5Y  51  
R5Y  H21  H21  H  0  1  N  N  N  48.546   0.091  -25.017   8.093   0.482   1.157  H21  R5Y  52  
R5Y  H22  H22  H  0  1  N  N  N  44.604  -0.441  -25.876   9.983   3.947   0.291  H22  R5Y  53  
R5Y  H23  H23  H  0  1  N  N  N  45.698  -1.694  -25.021   8.413   3.793   1.296  H23  R5Y  54  
R5Y  H24  H24  H  0  1  N  N  N  46.566  -1.308  -30.791   4.332  -2.327   1.355  H24  R5Y  55  
R5Y  H25  H25  H  0  1  N  N  N  44.498  -8.013  -28.677  -0.962  -3.762  -0.240  H25  R5Y  56  
R5Y  H26  H26  H  0  1  N  N  N  43.434  -5.449  -32.908  -0.122   2.230  -0.400  H26  R5Y  57  
R5Y  H27  H27  H  0  1  N  N  N  44.367  -0.841  -39.809  -8.236  -0.980   1.341  H27  R5Y  58  
#   #
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
R5Y  N16  C15  SING  N  N   1  
R5Y  N16  C17  SING  N  N   2  
R5Y  C15  C14  SING  N  N   3  
R5Y  C17  C18  SING  N  N   4  
R5Y  C14  C13  SING  N  N   5  
R5Y  C18  C13  SING  N  N   6  
R5Y  C13  C12  SING  N  N   7  
R5Y  C19  C12  DOUB  Y  N   8  
R5Y  C19  C20  SING  Y  N   9  
R5Y  C12  C11  SING  Y  N  10  
R5Y  C20  C09  DOUB  Y  N  11  
R5Y  C11  C10  DOUB  Y  N  12  
R5Y  C09  C10  SING  Y  N  13  
R5Y  C09  N08  SING  N  N  14  
R5Y  N08  C07  SING  N  N  15  
R5Y  C07  N21  DOUB  Y  N  16  
R5Y  C07  N06  SING  Y  N  17  
R5Y  N21  C22  SING  Y  N  18  
R5Y  N06  C05  DOUB  Y  N  19  
R5Y  C31  C23  SING  Y  N  20  
R5Y  C31  N30  DOUB  Y  N  21  
R5Y  C22  C23  SING  N  N  22  
R5Y  C22  C04  DOUB  Y  N  23  
R5Y  C05  C04  SING  Y  N  24  
R5Y  C05  N01  SING  Y  N  25  
R5Y  C23  C24  DOUB  Y  N  26  
R5Y  N30  N25  SING  Y  N  27  
R5Y  C04  C03  SING  Y  N  28  
R5Y  N01  C02  SING  Y  N  29  
R5Y  C24  N25  SING  Y  N  30  
R5Y  N25  C26  SING  N  N  31  
R5Y  C03  C02  DOUB  Y  N  32  
R5Y  C26  C27  SING  N  N  33  
R5Y  C28  C27  SING  N  N  34  
R5Y  C28  C29  DOUB  N  N  35  
R5Y  C10  H1   SING  N  N  36  
R5Y  C13  H2   SING  N  N  37  
R5Y  C15  H3   SING  N  N  38  
R5Y  C15  H4   SING  N  N  39  
R5Y  C17  H5   SING  N  N  40  
R5Y  C17  H6   SING  N  N  41  
R5Y  C20  H7   SING  N  N  42  
R5Y  C24  H8   SING  N  N  43  
R5Y  C26  H9   SING  N  N  44  
R5Y  C26  H10  SING  N  N  45  
R5Y  C28  H11  SING  N  N  46  
R5Y  C02  H12  SING  N  N  47  
R5Y  C03  H13  SING  N  N  48  
R5Y  C11  H14  SING  N  N  49  
R5Y  C14  H15  SING  N  N  50  
R5Y  C14  H16  SING  N  N  51  
R5Y  C18  H17  SING  N  N  52  
R5Y  C18  H18  SING  N  N  53  
R5Y  C19  H19  SING  N  N  54  
R5Y  C27  H20  SING  N  N  55  
R5Y  C27  H21  SING  N  N  56  
R5Y  C29  H22  SING  N  N  57  
R5Y  C29  H23  SING  N  N  58  
R5Y  C31  H24  SING  N  N  59  
R5Y  N01  H25  SING  N  N  60  
R5Y  N08  H26  SING  N  N  61  
R5Y  N16  H27  SING  N  N  62  
#   #
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
R5Y  SMILES            ACDLabs               12.01  "c2c(ccc(C1CCNCC1)c2)Nc5nc(c3cn(CC\C=C)nc3)c4ccnc4n5"  
R5Y  InChI             InChI                 1.03   "InChI=1S/C24H27N7/c1-2-3-14-31-16-19(15-27-31)22-21-10-13-26-23(21)30-24(29-22)28-20-6-4-17(5-7-20)18-8-11-25-12-9-18/h2,4-7,10,13,15-16,18,25H,1,3,8-9,11-12,14H2,(H2,26,28,29,30)"  
R5Y  InChIKey          InChI                 1.03   OZUDWDBQZJPKOG-UHFFFAOYSA-N  
R5Y  SMILES_CANONICAL  CACTVS                3.385  "C=CCCn1cc(cn1)c2nc(Nc3ccc(cc3)C4CCNCC4)nc5[nH]ccc25"  
R5Y  SMILES            CACTVS                3.385  "C=CCCn1cc(cn1)c2nc(Nc3ccc(cc3)C4CCNCC4)nc5[nH]ccc25"  
R5Y  SMILES_CANONICAL  "OpenEye OEToolkits"  2.0.7  "C=CCCn1cc(cn1)c2c3cc[nH]c3nc(n2)Nc4ccc(cc4)C5CCNCC5"  
R5Y  SMILES            "OpenEye OEToolkits"  2.0.7  "C=CCCn1cc(cn1)c2c3cc[nH]c3nc(n2)Nc4ccc(cc4)C5CCNCC5"  
#   #
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
R5Y  "SYSTEMATIC NAME"  ACDLabs               12.01  "4-[1-(but-3-en-1-yl)-1H-pyrazol-4-yl]-N-[4-(piperidin-4-yl)phenyl]-7H-pyrrolo[2,3-d]pyrimidin-2-amine"  
R5Y  "SYSTEMATIC NAME"  "OpenEye OEToolkits"  2.0.7  "4-(1-but-3-enylpyrazol-4-yl)-~{N}-(4-piperidin-4-ylphenyl)-7~{H}-pyrrolo[2,3-d]pyrimidin-2-amine"  
#   #
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
R5Y  "Create component"  2020-01-30  RCSB  
R5Y  "Initial release"   2021-02-17  RCSB  
##
