data_R3Y
#

_chem_comp.id                                   R3Y
_chem_comp.name                                 "1-{[7-(5-chloro-2-{[(3R,4S)-4-fluoropyrrolidin-3-yl]oxy}-3-methylphenyl)thieno[3,2-b]pyridin-2-yl]methyl}-1H-pyrrole-2,5-dione"
_chem_comp.type                                 non-polymer
_chem_comp.pdbx_type                            HETAIN
_chem_comp.formula                              "C23 H21 Cl F N3 O3 S"
_chem_comp.mon_nstd_parent_comp_id              ?
_chem_comp.pdbx_synonyms                        ?
_chem_comp.pdbx_formal_charge                   0
_chem_comp.pdbx_initial_date                    2020-01-29
_chem_comp.pdbx_modified_date                   2020-06-08
_chem_comp.pdbx_ambiguous_flag                  N
_chem_comp.pdbx_release_status                  REL
_chem_comp.pdbx_replaced_by                     ?
_chem_comp.pdbx_replaces                        ?
_chem_comp.formula_weight                       473.948
_chem_comp.one_letter_code                      ?
_chem_comp.three_letter_code                    R3Y
_chem_comp.pdbx_model_coordinates_details       ?
_chem_comp.pdbx_model_coordinates_missing_flag  N
_chem_comp.pdbx_ideal_coordinates_details       Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag  N
_chem_comp.pdbx_model_coordinates_db_code       6VN3
_chem_comp.pdbx_subcomponent_list               ?
_chem_comp.pdbx_processing_site                 RCSB
#   #
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
R3Y  C1    C1   C   0  1  N  N  N  25.922   0.761  24.870   3.803   0.675  -2.555  C1    R3Y   1  
R3Y  C2    C2   C   0  1  Y  N  N  25.881   0.134  26.250   3.189   1.268  -1.314  C2    R3Y   2  
R3Y  C3    C3   C   0  1  Y  N  N  26.063  -1.250  26.337   3.445   2.584  -0.977  C3    R3Y   3  
R3Y  C4    C4   C   0  1  Y  N  N  26.037  -1.892  27.572   2.885   3.136   0.162  C4    R3Y   4  
R3Y  C5    C5   C   0  1  Y  N  N  25.824  -1.165  28.730   2.064   2.376   0.972  C5    R3Y   5  
R3Y  C6    C6   C   0  1  Y  N  N  25.633   0.217  28.681   1.799   1.049   0.641  C6    R3Y   6  
R3Y  C7    C7   C   0  1  Y  N  N  25.667   0.896  27.420   2.362   0.496  -0.513  C7    R3Y   7  
R3Y  C11   C8   C   0  1  N  N  N  25.881   4.558  28.016   4.080  -2.207  -1.146  C11   R3Y   8  
R3Y  C17   C9   C   0  1  Y  N  N  25.401   0.937  29.959   0.919   0.228   1.507  C17   R3Y   9  
R3Y  C18   C10  C   0  1  Y  N  N  24.215   1.680  30.111   1.305  -0.108   2.802  C18   R3Y  10  
R3Y  C19   C11  C   0  1  Y  N  N  24.001   2.387  31.290   0.455  -0.876   3.578  C19   R3Y  11  
R3Y  C21   C12  C   0  1  Y  N  N  26.069   1.693  32.184  -1.133  -1.003   1.879  C21   R3Y  12  
R3Y  C23   C13  C   0  1  Y  N  N  28.169   0.857  32.783  -2.519  -0.946  -0.004  C23   R3Y  13  
R3Y  O29   O1   O   0  1  N  N  N  31.220   0.313  31.410  -5.732  -0.813   1.102  O29   R3Y  14  
R3Y  C30   C14  C   0  1  N  N  N  32.222   2.436  31.902  -6.375   1.263   0.025  C30   R3Y  15  
R3Y  C31   C15  C   0  1  N  N  N  31.885   3.417  33.033  -5.762   1.896  -1.240  C31   R3Y  16  
R3Y  C32   C16  C   0  1  N  N  N  30.743   2.738  33.754  -4.678   0.918  -1.637  C32   R3Y  17  
R3Y  O8    O2   O   0  1  N  N  N  25.494   2.255  27.310   2.105  -0.796  -0.846  O8    R3Y  18  
R3Y  C9    C17  C   0  1  N  N  R  26.496   3.164  27.826   2.911  -1.799  -0.225  C9    R3Y  19  
R3Y  N12   N1   N   0  1  N  N  N  27.106   5.392  28.156   4.246  -3.667  -1.020  N12   R3Y  20  
R3Y  C13   C18  C   0  1  N  N  N  28.330   4.680  27.723   3.252  -4.172  -0.048  C13   R3Y  21  
R3Y  C14   C19  C   0  1  N  N  S  27.711   3.501  26.935   2.115  -3.121  -0.064  C14   R3Y  22  
R3Y  F16   F1   F   0  1  N  N  N  27.369   3.964  25.664   1.258  -3.325  -1.151  F16   R3Y  23  
R3Y  N20   N2   N   0  1  Y  N  N  24.896   2.378  32.272  -0.700  -1.293   3.121  N20   R3Y  24  
R3Y  C22   C20  C   0  1  Y  N  N  27.140   1.595  33.157  -2.376  -1.386   1.232  C22   R3Y  25  
R3Y  S24   S1   S   0  1  Y  N  N  27.916   0.176  31.187  -1.134   0.005  -0.506  S24   R3Y  26  
R3Y  C25   C21  C   0  1  Y  N  N  26.353   0.953  31.019  -0.332  -0.227   1.040  C25   R3Y  27  
R3Y  C26   C22  C   0  1  N  N  N  29.400   0.633  33.624  -3.722  -1.218  -0.869  C26   R3Y  28  
R3Y  N27   N3   N   0  1  N  N  N  30.461   1.558  33.167  -4.661  -0.098  -0.765  N27   R3Y  29  
R3Y  C28   C23  C   0  1  N  N  N  31.247   1.302  32.106  -5.574  -0.007   0.211  C28   R3Y  30  
R3Y  O33   O3   O   0  1  N  N  N  30.204   3.207  34.728  -3.942   1.035  -2.592  O33   R3Y  31  
R3Y  CL34  CL1  CL  0  0  N  N  N  26.266  -3.603  27.675   3.215   4.790   0.575  CL34  R3Y  32  
R3Y  H1    H1   H   0  1  N  N  N  24.909   0.772  24.441   4.768   0.233  -2.307  H1    R3Y  33  
R3Y  H2    H2   H   0  1  N  N  N  26.299   1.792  24.947   3.142  -0.094  -2.955  H2    R3Y  34  
R3Y  H3    H3   H   0  1  N  N  N  26.589   0.175  24.221   3.943   1.458  -3.301  H3    R3Y  35  
R3Y  H4    H4   H   0  1  N  N  N  26.225  -1.826  25.438   4.087   3.184  -1.606  H4    R3Y  36  
R3Y  H5    H5   H   0  1  N  N  N  25.805  -1.673  29.683   1.629   2.810   1.860  H5    R3Y  37  
R3Y  H6    H6   H   0  1  N  N  N  25.285   4.859  27.142   3.846  -1.949  -2.179  H6    R3Y  38  
R3Y  H7    H7   H   0  1  N  N  N  25.256   4.604  28.920   4.994  -1.702  -0.835  H7    R3Y  39  
R3Y  H8    H8   H   0  1  N  N  N  23.479   1.701  29.321   2.254   0.226   3.195  H8    R3Y  40  
R3Y  H9    H9   H   0  1  N  N  N  23.090   2.954  31.409   0.751  -1.139   4.583  H9    R3Y  41  
R3Y  H10   H10  H   0  1  N  N  N  33.260   2.081  31.988  -6.251   1.924   0.883  H10   R3Y  42  
R3Y  H11   H11  H   0  1  N  N  N  32.746   3.557  33.703  -6.510   1.980  -2.028  H11   R3Y  43  
R3Y  H12   H12  H   0  1  N  N  N  26.863   2.804  28.799   3.283  -1.450   0.738  H12   R3Y  44  
R3Y  H13   H13  H   0  1  N  N  N  27.209   5.652  29.116   5.184  -3.900  -0.732  H13   R3Y  45  
R3Y  H15   H15  H   0  1  N  N  N  28.920   4.328  28.582   2.875  -5.144  -0.363  H15   R3Y  46  
R3Y  H16   H16  H   0  1  N  N  N  28.960   5.311  27.079   3.694  -4.240   0.946  H16   R3Y  47  
R3Y  H17   H17  H   0  1  N  N  N  28.410   2.653  26.904   1.561  -3.131   0.875  H17   R3Y  48  
R3Y  H18   H18  H   0  1  N  N  N  27.099   2.089  34.116  -3.127  -1.985   1.725  H18   R3Y  49  
R3Y  H19   H19  H   0  1  N  N  N  29.167   0.830  34.681  -3.406  -1.331  -1.906  H19   R3Y  50  
R3Y  H20   H20  H   0  1  N  N  N  29.741  -0.407  33.511  -4.210  -2.134  -0.536  H20   R3Y  51  
R3Y  H14   H14  H   0  1  N  N  N  32.075   2.907  30.919  -7.428   1.033  -0.133  H14   R3Y  52  
R3Y  H21   H21  H   0  1  N  N  N  31.572   4.391  32.629  -5.332   2.872  -1.012  H21   R3Y  53  
#   #
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
R3Y  C1   C2    SING  N  N   1  
R3Y  F16  C14   SING  N  N   2  
R3Y  C2   C3    DOUB  Y  N   3  
R3Y  C2   C7    SING  Y  N   4  
R3Y  C3   C4    SING  Y  N   5  
R3Y  C14  C13   SING  N  N   6  
R3Y  C14  C9    SING  N  N   7  
R3Y  O8   C7    SING  N  N   8  
R3Y  O8   C9    SING  N  N   9  
R3Y  C7   C6    DOUB  Y  N  10  
R3Y  C4   CL34  SING  N  N  11  
R3Y  C4   C5    DOUB  Y  N  12  
R3Y  C13  N12   SING  N  N  13  
R3Y  C9   C11   SING  N  N  14  
R3Y  C11  N12   SING  N  N  15  
R3Y  C6   C5    SING  Y  N  16  
R3Y  C6   C17   SING  N  N  17  
R3Y  C17  C18   DOUB  Y  N  18  
R3Y  C17  C25   SING  Y  N  19  
R3Y  C18  C19   SING  Y  N  20  
R3Y  C25  S24   SING  Y  N  21  
R3Y  C25  C21   DOUB  Y  N  22  
R3Y  S24  C23   SING  Y  N  23  
R3Y  C19  N20   DOUB  Y  N  24  
R3Y  O29  C28   DOUB  N  N  25  
R3Y  C30  C28   SING  N  N  26  
R3Y  C30  C31   SING  N  N  27  
R3Y  C28  N27   SING  N  N  28  
R3Y  C21  N20   SING  Y  N  29  
R3Y  C21  C22   SING  Y  N  30  
R3Y  C23  C22   DOUB  Y  N  31  
R3Y  C23  C26   SING  N  N  32  
R3Y  C31  C32   SING  N  N  33  
R3Y  N27  C26   SING  N  N  34  
R3Y  N27  C32   SING  N  N  35  
R3Y  C32  O33   DOUB  N  N  36  
R3Y  C1   H1    SING  N  N  37  
R3Y  C1   H2    SING  N  N  38  
R3Y  C1   H3    SING  N  N  39  
R3Y  C3   H4    SING  N  N  40  
R3Y  C5   H5    SING  N  N  41  
R3Y  C11  H6    SING  N  N  42  
R3Y  C11  H7    SING  N  N  43  
R3Y  C18  H8    SING  N  N  44  
R3Y  C19  H9    SING  N  N  45  
R3Y  C30  H10   SING  N  N  46  
R3Y  C31  H11   SING  N  N  47  
R3Y  C9   H12   SING  N  N  48  
R3Y  N12  H13   SING  N  N  49  
R3Y  C13  H15   SING  N  N  50  
R3Y  C13  H16   SING  N  N  51  
R3Y  C14  H17   SING  N  N  52  
R3Y  C22  H18   SING  N  N  53  
R3Y  C26  H19   SING  N  N  54  
R3Y  C26  H20   SING  N  N  55  
R3Y  C30  H14   SING  N  N  56  
R3Y  C31  H21   SING  N  N  57  
#   #
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
R3Y  SMILES            ACDLabs               12.01  "Cc4cc(Cl)cc(c2ccnc3cc(CN1C(CCC1=O)=O)sc23)c4OC5CNCC5F"  
R3Y  InChI             InChI                 1.03   "InChI=1S/C23H21ClFN3O3S/c1-12-6-13(24)7-16(22(12)31-19-10-26-9-17(19)25)15-4-5-27-18-8-14(32-23(15)18)11-28-20(29)2-3-21(28)30/h4-8,17,19,26H,2-3,9-11H2,1H3/t17-,19+/m0/s1"  
R3Y  InChIKey          InChI                 1.03   SWLBIOVQZDSJKD-PKOBYXMFSA-N  
R3Y  SMILES_CANONICAL  CACTVS                3.385  "Cc1cc(Cl)cc(c1O[C@@H]2CNC[C@@H]2F)c3ccnc4cc(CN5C(=O)CCC5=O)sc34"  
R3Y  SMILES            CACTVS                3.385  "Cc1cc(Cl)cc(c1O[CH]2CNC[CH]2F)c3ccnc4cc(CN5C(=O)CCC5=O)sc34"  
R3Y  SMILES_CANONICAL  "OpenEye OEToolkits"  2.0.7  "Cc1cc(cc(c1O[C@@H]2CNC[C@@H]2F)c3ccnc4c3sc(c4)CN5C(=O)CCC5=O)Cl"  
R3Y  SMILES            "OpenEye OEToolkits"  2.0.7  "Cc1cc(cc(c1OC2CNCC2F)c3ccnc4c3sc(c4)CN5C(=O)CCC5=O)Cl"  
#   #
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
R3Y  "SYSTEMATIC NAME"  ACDLabs               12.01  "1-{[7-(5-chloro-2-{[(3R,4S)-4-fluoropyrrolidin-3-yl]oxy}-3-methylphenyl)thieno[3,2-b]pyridin-2-yl]methyl}pyrrolidine-2,5-dione"  
R3Y  "SYSTEMATIC NAME"  "OpenEye OEToolkits"  2.0.7  "1-[[7-[5-chloranyl-2-[(3~{R},4~{S})-4-fluoranylpyrrolidin-3-yl]oxy-3-methyl-phenyl]thieno[3,2-b]pyridin-2-yl]methyl]pyrrolidine-2,5-dione"  
#   #
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
R3Y  "Create component"   2020-01-29  RCSB  
R3Y  "Initial release"    2020-04-29  RCSB  
R3Y  "Modify descriptor"  2020-06-08  RCSB  
##
