data_QDY
#

_chem_comp.id                                   QDY
_chem_comp.name                                 "tert-butyl [(2R)-1-(naphthalen-1-yl)-3-{[(2S)-1-oxo-3-phenyl-1-{[2-(pyridin-3-yl)ethyl]amino}propan-2-yl]sulfanyl}propan-2-yl]carbamate"
_chem_comp.type                                 non-polymer
_chem_comp.pdbx_type                            HETAIN
_chem_comp.formula                              "C34 H39 N3 O3 S"
_chem_comp.mon_nstd_parent_comp_id              ?
_chem_comp.pdbx_synonyms                        ?
_chem_comp.pdbx_formal_charge                   0
_chem_comp.pdbx_initial_date                    2019-10-17
_chem_comp.pdbx_modified_date                   2020-01-31
_chem_comp.pdbx_ambiguous_flag                  N
_chem_comp.pdbx_release_status                  REL
_chem_comp.pdbx_replaced_by                     ?
_chem_comp.pdbx_replaces                        ?
_chem_comp.formula_weight                       569.757
_chem_comp.one_letter_code                      ?
_chem_comp.three_letter_code                    QDY
_chem_comp.pdbx_model_coordinates_details       ?
_chem_comp.pdbx_model_coordinates_missing_flag  N
_chem_comp.pdbx_ideal_coordinates_details       Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag  N
_chem_comp.pdbx_model_coordinates_db_code       6UNJ
_chem_comp.pdbx_subcomponent_list               ?
_chem_comp.pdbx_processing_site                 RCSB
#   #
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
QDY  C10  C1   C  0  1  N  N  N  -29.582  -33.795  135.755  -1.524  -0.738   0.432  C10  QDY   1  
QDY  C12  C2   C  0  1  N  N  S  -28.950  -32.087  133.297   1.303  -0.812   0.169  C12  QDY   2  
QDY  C13  C3   C  0  1  N  N  N  -28.524  -32.227  131.829   1.365  -2.304   0.505  C13  QDY   3  
QDY  C14  C4   C  0  1  Y  N  N  -27.047  -32.349  131.623   2.539  -2.566   1.413  C14  QDY   4  
QDY  C15  C5   C  0  1  Y  N  N  -26.229  -31.223  131.698   2.415  -2.371   2.776  C15  QDY   5  
QDY  C16  C6   C  0  1  Y  N  N  -24.856  -31.308  131.518   3.492  -2.611   3.609  C16  QDY   6  
QDY  C17  C7   C  0  1  Y  N  N  -24.255  -32.534  131.268   4.693  -3.045   3.079  C17  QDY   7  
QDY  C18  C8   C  0  1  Y  N  N  -25.047  -33.667  131.186   4.816  -3.240   1.716  C18  QDY   8  
QDY  C19  C9   C  0  1  Y  N  N  -26.423  -33.575  131.367   3.738  -3.006   0.883  C19  QDY   9  
QDY  C01  C10  C  0  1  N  N  N  -22.742  -32.479  136.667  -3.494   4.159   2.086  C01  QDY  10  
QDY  C02  C11  C  0  1  N  N  N  -23.520  -33.684  136.154  -2.392   4.275   1.031  C02  QDY  11  
QDY  C03  C12  C  0  1  N  N  N  -23.732  -33.534  134.626  -2.406   5.683   0.432  C03  QDY  12  
QDY  C04  C13  C  0  1  N  N  N  -22.671  -34.943  136.371  -1.033   4.011   1.682  C04  QDY  13  
QDY  C06  C14  C  0  1  N  N  N  -25.926  -33.058  136.525  -2.642   2.003   0.343  C06  QDY  14  
QDY  C09  C15  C  0  1  N  N  R  -28.541  -32.931  136.564  -2.871  -0.363  -0.189  C09  QDY  15  
QDY  C20  C16  C  0  1  N  N  N  -30.219  -31.242  133.448   2.511  -0.430  -0.646  C20  QDY  16  
QDY  C23  C17  C  0  1  N  N  N  -31.450  -29.303  134.563   4.867   0.163  -0.830  C23  QDY  17  
QDY  C24  C18  C  0  1  N  N  N  -31.158  -27.809  134.293   6.069   0.354   0.098  C24  QDY  18  
QDY  C25  C19  C  0  1  Y  N  N  -29.930  -27.545  133.451   7.277   0.737  -0.718  C25  QDY  19  
QDY  C26  C20  C  0  1  Y  N  N  -30.005  -27.426  132.052   8.115  -0.237  -1.227  C26  QDY  20  
QDY  C28  C21  C  0  1  Y  N  N  -27.732  -27.076  131.787   9.470   1.347  -2.207  C28  QDY  21  
QDY  C29  C22  C  0  1  Y  N  N  -27.537  -27.180  133.167   8.681   2.375  -1.727  C29  QDY  22  
QDY  C30  C23  C  0  1  Y  N  N  -28.640  -27.417  133.988   7.559   2.070  -0.972  C30  QDY  23  
QDY  C31  C24  C  0  1  N  N  N  -29.116  -32.577  138.002  -3.985  -0.591   0.835  C31  QDY  24  
QDY  C32  C25  C  0  1  Y  N  N  -29.378  -31.108  138.292  -5.322  -0.339   0.187  C32  QDY  25  
QDY  C33  C26  C  0  1  Y  N  N  -30.661  -30.615  138.744  -5.962  -1.362  -0.533  C33  QDY  26  
QDY  C34  C27  C  0  1  Y  N  N  -31.788  -31.458  138.957  -5.379  -2.634  -0.668  C34  QDY  27  
QDY  C35  C28  C  0  1  Y  N  N  -32.995  -30.972  139.384  -6.028  -3.601  -1.373  C35  QDY  28  
QDY  C36  C29  C  0  1  Y  N  N  -33.171  -29.599  139.637  -7.264  -3.349  -1.965  C36  QDY  29  
QDY  C37  C30  C  0  1  Y  N  N  -32.121  -28.749  139.445  -7.859  -2.130  -1.855  C37  QDY  30  
QDY  C38  C31  C  0  1  Y  N  N  -30.854  -29.236  138.999  -7.219  -1.107  -1.136  C38  QDY  31  
QDY  C39  C32  C  0  1  Y  N  N  -29.768  -28.338  138.806  -7.802   0.165  -1.000  C39  QDY  32  
QDY  C40  C33  C  0  1  Y  N  N  -28.563  -28.813  138.381  -7.153   1.132  -0.296  C40  QDY  33  
QDY  C41  C34  C  0  1  Y  N  N  -28.370  -30.194  138.124  -5.919   0.879   0.301  C41  QDY  34  
QDY  N08  N1   N  0  1  N  N  N  -27.230  -33.621  136.651  -2.851   1.047  -0.584  N08  QDY  35  
QDY  N22  N2   N  0  1  N  N  N  -30.287  -30.171  134.356   3.693  -0.209  -0.037  N22  QDY  36  
QDY  N27  N3   N  0  1  Y  N  N  -28.956  -27.194  131.227   9.171   0.089  -1.946  N27  QDY  37  
QDY  O05  O1   O  0  1  N  N  N  -24.830  -33.854  136.790  -2.623   3.300  -0.020  O05  QDY  38  
QDY  O07  O2   O  0  1  N  N  N  -25.856  -31.875  136.193  -2.469   1.696   1.506  O07  QDY  39  
QDY  O21  O3   O  0  1  N  N  N  -31.229  -31.444  132.789   2.420  -0.320  -1.850  O21  QDY  40  
QDY  S11  S1   S  0  1  N  N  N  -29.254  -33.793  133.935  -0.203  -0.469  -0.782  S11  QDY  41  
QDY  H1   H1   H  0  1  N  N  N  -30.589  -33.388  135.931  -1.342  -0.118   1.309  H1   QDY  42  
QDY  H2   H2   H  0  1  N  N  N  -29.537  -34.832  136.119  -1.538  -1.788   0.725  H2   QDY  43  
QDY  H3   H3   H  0  1  N  N  N  -28.131  -31.663  133.896   1.289  -0.232   1.092  H3   QDY  44  
QDY  H4   H4   H  0  1  N  N  N  -28.875  -31.339  131.283   0.444  -2.602   1.006  H4   QDY  45  
QDY  H5   H5   H  0  1  N  N  N  -29.004  -33.126  131.416   1.481  -2.878  -0.414  H5   QDY  46  
QDY  H6   H6   H  0  1  N  N  N  -26.675  -30.261  131.901   1.477  -2.032   3.190  H6   QDY  47  
QDY  H7   H7   H  0  1  N  N  N  -24.251  -30.415  131.573   3.396  -2.459   4.674  H7   QDY  48  
QDY  H8   H8   H  0  1  N  N  N  -23.185  -32.603  131.139   5.534  -3.232   3.729  H8   QDY  49  
QDY  H9   H9   H  0  1  N  N  N  -24.594  -34.626  130.981   5.754  -3.579   1.301  H9   QDY  50  
QDY  H10  H10  H  0  1  N  N  N  -27.024  -34.471  131.309   3.834  -3.158  -0.182  H10  QDY  51  
QDY  H11  H11  H  0  1  N  N  N  -22.587  -32.577  137.752  -3.321   4.891   2.874  H11  QDY  52  
QDY  H12  H12  H  0  1  N  N  N  -21.767  -32.429  136.160  -4.463   4.347   1.622  H12  QDY  53  
QDY  H13  H13  H  0  1  N  N  N  -23.310  -31.560  136.460  -3.485   3.156   2.512  H13  QDY  54  
QDY  H14  H14  H  0  1  N  N  N  -24.339  -32.639  134.426  -1.621   5.766  -0.320  H14  QDY  55  
QDY  H15  H15  H  0  1  N  N  N  -22.756  -33.434  134.129  -3.374   5.871  -0.032  H15  QDY  56  
QDY  H16  H16  H  0  1  N  N  N  -24.251  -34.423  134.239  -2.233   6.415   1.220  H16  QDY  57  
QDY  H17  H17  H  0  1  N  N  N  -22.496  -35.087  137.447  -1.023   3.008   2.109  H17  QDY  58  
QDY  H18  H18  H  0  1  N  N  N  -23.201  -35.817  135.966  -0.248   4.094   0.930  H18  QDY  59  
QDY  H19  H19  H  0  1  N  N  N  -21.706  -34.828  135.855  -0.860   4.744   2.471  H19  QDY  60  
QDY  H20  H20  H  0  1  N  N  N  -28.405  -31.983  136.022  -3.052  -0.984  -1.066  H20  QDY  61  
QDY  H21  H21  H  0  1  N  N  N  -31.784  -29.410  135.606   4.667   1.093  -1.361  H21  QDY  62  
QDY  H22  H22  H  0  1  N  N  N  -32.253  -29.629  133.886   5.085  -0.627  -1.549  H22  QDY  63  
QDY  H23  H23  H  0  1  N  N  N  -31.023  -27.306  135.262   5.851   1.144   0.817  H23  QDY  64  
QDY  H24  H24  H  0  1  N  N  N  -32.027  -27.379  133.774   6.269  -0.576   0.629  H24  QDY  65  
QDY  H25  H25  H  0  1  N  N  N  -30.979  -27.528  131.598   7.902  -1.278  -1.033  H25  QDY  66  
QDY  H26  H26  H  0  1  N  N  N  -26.879  -26.896  131.149  10.345   1.576  -2.796  H26  QDY  67  
QDY  H27  H27  H  0  1  N  N  N  -26.549  -27.079  133.591   8.935   3.404  -1.938  H27  QDY  68  
QDY  H28  H28  H  0  1  N  N  N  -28.498  -27.503  135.055   6.920   2.853  -0.591  H28  QDY  69  
QDY  H29  H29  H  0  1  N  N  N  -30.068  -33.115  138.122  -3.943  -1.619   1.195  H29  QDY  70  
QDY  H30  H30  H  0  1  N  N  N  -28.394  -32.940  138.748  -3.853   0.094   1.673  H30  QDY  71  
QDY  H31  H31  H  0  1  N  N  N  -31.688  -32.518  138.776  -4.422  -2.843  -0.215  H31  QDY  72  
QDY  H32  H32  H  0  1  N  N  N  -33.822  -31.651  139.528  -5.578  -4.577  -1.475  H32  QDY  73  
QDY  H33  H33  H  0  1  N  N  N  -34.124  -29.223  139.978  -7.758  -4.134  -2.519  H33  QDY  74  
QDY  H34  H34  H  0  1  N  N  N  -32.249  -27.693  139.633  -8.817  -1.949  -2.320  H34  QDY  75  
QDY  H35  H35  H  0  1  N  N  N  -29.898  -27.283  138.996  -8.759   0.375  -1.454  H35  QDY  76  
QDY  H36  H36  H  0  1  N  N  N  -27.742  -28.126  138.238  -7.603   2.108  -0.194  H36  QDY  77  
QDY  H37  H37  H  0  1  N  N  N  -27.402  -30.535  137.787  -5.427   1.662   0.859  H37  QDY  78  
QDY  H38  H38  H  0  1  N  N  N  -27.266  -34.606  136.819  -2.988   1.293  -1.512  H38  QDY  79  
QDY  H39  H39  H  0  1  N  N  N  -29.473  -29.986  134.907   3.766  -0.296   0.926  H39  QDY  80  
#   #
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
QDY  C18  C17  DOUB  Y  N   1  
QDY  C18  C19  SING  Y  N   2  
QDY  N27  C28  DOUB  Y  N   3  
QDY  N27  C26  SING  Y  N   4  
QDY  C17  C16  SING  Y  N   5  
QDY  C19  C14  DOUB  Y  N   6  
QDY  C16  C15  DOUB  Y  N   7  
QDY  C14  C15  SING  Y  N   8  
QDY  C14  C13  SING  N  N   9  
QDY  C28  C29  SING  Y  N  10  
QDY  C13  C12  SING  N  N  11  
QDY  C26  C25  DOUB  Y  N  12  
QDY  O21  C20  DOUB  N  N  13  
QDY  C29  C30  DOUB  Y  N  14  
QDY  C12  C20  SING  N  N  15  
QDY  C12  S11  SING  N  N  16  
QDY  C20  N22  SING  N  N  17  
QDY  C25  C30  SING  Y  N  18  
QDY  C25  C24  SING  N  N  19  
QDY  S11  C10  SING  N  N  20  
QDY  C24  C23  SING  N  N  21  
QDY  N22  C23  SING  N  N  22  
QDY  C03  C02  SING  N  N  23  
QDY  C10  C09  SING  N  N  24  
QDY  C02  C04  SING  N  N  25  
QDY  C02  C01  SING  N  N  26  
QDY  C02  O05  SING  N  N  27  
QDY  O07  C06  DOUB  N  N  28  
QDY  C06  N08  SING  N  N  29  
QDY  C06  O05  SING  N  N  30  
QDY  C09  N08  SING  N  N  31  
QDY  C09  C31  SING  N  N  32  
QDY  C31  C32  SING  N  N  33  
QDY  C41  C32  DOUB  Y  N  34  
QDY  C41  C40  SING  Y  N  35  
QDY  C32  C33  SING  Y  N  36  
QDY  C40  C39  DOUB  Y  N  37  
QDY  C33  C34  DOUB  Y  N  38  
QDY  C33  C38  SING  Y  N  39  
QDY  C39  C38  SING  Y  N  40  
QDY  C34  C35  SING  Y  N  41  
QDY  C38  C37  DOUB  Y  N  42  
QDY  C35  C36  DOUB  Y  N  43  
QDY  C37  C36  SING  Y  N  44  
QDY  C10  H1   SING  N  N  45  
QDY  C10  H2   SING  N  N  46  
QDY  C12  H3   SING  N  N  47  
QDY  C13  H4   SING  N  N  48  
QDY  C13  H5   SING  N  N  49  
QDY  C15  H6   SING  N  N  50  
QDY  C16  H7   SING  N  N  51  
QDY  C17  H8   SING  N  N  52  
QDY  C18  H9   SING  N  N  53  
QDY  C19  H10  SING  N  N  54  
QDY  C01  H11  SING  N  N  55  
QDY  C01  H12  SING  N  N  56  
QDY  C01  H13  SING  N  N  57  
QDY  C03  H14  SING  N  N  58  
QDY  C03  H15  SING  N  N  59  
QDY  C03  H16  SING  N  N  60  
QDY  C04  H17  SING  N  N  61  
QDY  C04  H18  SING  N  N  62  
QDY  C04  H19  SING  N  N  63  
QDY  C09  H20  SING  N  N  64  
QDY  C23  H21  SING  N  N  65  
QDY  C23  H22  SING  N  N  66  
QDY  C24  H23  SING  N  N  67  
QDY  C24  H24  SING  N  N  68  
QDY  C26  H25  SING  N  N  69  
QDY  C28  H26  SING  N  N  70  
QDY  C29  H27  SING  N  N  71  
QDY  C30  H28  SING  N  N  72  
QDY  C31  H29  SING  N  N  73  
QDY  C31  H30  SING  N  N  74  
QDY  C34  H31  SING  N  N  75  
QDY  C35  H32  SING  N  N  76  
QDY  C36  H33  SING  N  N  77  
QDY  C37  H34  SING  N  N  78  
QDY  C39  H35  SING  N  N  79  
QDY  C40  H36  SING  N  N  80  
QDY  C41  H37  SING  N  N  81  
QDY  N08  H38  SING  N  N  82  
QDY  N22  H39  SING  N  N  83  
#   #
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
QDY  SMILES            ACDLabs               12.01  "C(C(NC(OC(C)(C)C)=O)Cc2c1ccccc1ccc2)SC(C(NCCc3cccnc3)=O)Cc4ccccc4"  
QDY  InChI             InChI                 1.03   "InChI=1S/C34H39N3O3S/c1-34(2,3)40-33(39)37-29(22-28-16-9-15-27-14-7-8-17-30(27)28)24-41-31(21-25-11-5-4-6-12-25)32(38)36-20-18-26-13-10-19-35-23-26/h4-17,19,23,29,31H,18,20-22,24H2,1-3H3,(H,36,38)(H,37,39)/t29-,31+/m1/s1"  
QDY  InChIKey          InChI                 1.03   GBALYMNAVPEZPA-VEEOACQBSA-N  
QDY  SMILES_CANONICAL  CACTVS                3.385  "CC(C)(C)OC(=O)N[C@@H](CS[C@@H](Cc1ccccc1)C(=O)NCCc2cccnc2)Cc3cccc4ccccc34"  
QDY  SMILES            CACTVS                3.385  "CC(C)(C)OC(=O)N[CH](CS[CH](Cc1ccccc1)C(=O)NCCc2cccnc2)Cc3cccc4ccccc34"  
QDY  SMILES_CANONICAL  "OpenEye OEToolkits"  2.0.7  "CC(C)(C)OC(=O)N[C@H](Cc1cccc2c1cccc2)CS[C@@H](Cc3ccccc3)C(=O)NCCc4cccnc4"  
QDY  SMILES            "OpenEye OEToolkits"  2.0.7  "CC(C)(C)OC(=O)NC(Cc1cccc2c1cccc2)CSC(Cc3ccccc3)C(=O)NCCc4cccnc4"  
#   #
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
QDY  "SYSTEMATIC NAME"  ACDLabs               12.01  "tert-butyl [(2R)-1-(naphthalen-1-yl)-3-{[(2S)-1-oxo-3-phenyl-1-{[2-(pyridin-3-yl)ethyl]amino}propan-2-yl]sulfanyl}propan-2-yl]carbamate"  
QDY  "SYSTEMATIC NAME"  "OpenEye OEToolkits"  2.0.7  "~{tert}-butyl ~{N}-[(2~{R})-1-naphthalen-1-yl-3-[(2~{S})-1-oxidanylidene-3-phenyl-1-(2-pyridin-3-ylethylamino)propan-2-yl]sulfanyl-propan-2-yl]carbamate"  
#   #
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
QDY  "Create component"  2019-10-17  RCSB  
QDY  "Initial release"   2020-02-05  RCSB  
##
