data_PQY
#

_chem_comp.id                                   PQY
_chem_comp.name                                 "(2E,2'E)-N,N'-[1,4-diazepane-1,4-diyldi(ethane-2,1-diyl)]bis[2-(hydroxyimino)acetamide]"
_chem_comp.type                                 NON-POLYMER
_chem_comp.pdbx_type                            HETAIN
_chem_comp.formula                              "C13 H24 N6 O4"
_chem_comp.mon_nstd_parent_comp_id              ?
_chem_comp.pdbx_synonyms                        ?
_chem_comp.pdbx_formal_charge                   0
_chem_comp.pdbx_initial_date                    2019-08-23
_chem_comp.pdbx_modified_date                   2020-02-07
_chem_comp.pdbx_ambiguous_flag                  N
_chem_comp.pdbx_release_status                  REL
_chem_comp.pdbx_replaced_by                     ?
_chem_comp.pdbx_replaces                        ?
_chem_comp.formula_weight                       328.367
_chem_comp.one_letter_code                      ?
_chem_comp.three_letter_code                    PQY
_chem_comp.pdbx_model_coordinates_details       ?
_chem_comp.pdbx_model_coordinates_missing_flag  N
_chem_comp.pdbx_ideal_coordinates_details       Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag  N
_chem_comp.pdbx_model_coordinates_db_code       6U3P
_chem_comp.pdbx_subcomponent_list               ?
_chem_comp.pdbx_processing_site                 RCSB
#   #
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
PQY  N1   N1   N  0  1  N  N  N  32.973  -12.065   9.554  -1.389   1.401   0.249  N1   PQY   1  
PQY  N3   N2   N  0  1  N  N  N  34.902  -12.265  12.484  -4.896   0.139   0.463  N3   PQY   2  
PQY  C4   C1   C  0  1  N  N  N  32.269  -13.910   8.476   0.774   2.675   0.431  C4   PQY   3  
PQY  C5   C2   C  0  1  N  N  N  33.383  -12.903   8.661  -0.620   2.402   1.026  C5   PQY   4  
PQY  C6   C3   C  0  1  N  N  N  31.588  -13.244   6.477   2.875   1.528   0.260  C6   PQY   5  
PQY  C7   C4   C  0  1  N  N  N  31.907  -14.537   5.722   3.502   0.161  -0.020  C7   PQY   6  
PQY  C8   C5   C  0  1  N  N  N  33.938  -11.770  10.341  -2.794   1.371   0.675  C8   PQY   7  
PQY  C10  C6   C  0  1  N  N  N  36.362  -12.141  12.493  -5.713  -0.839   0.023  C10  PQY   8  
PQY  C13  C7   C  0  1  N  N  N  28.936  -14.741   3.532   7.154  -0.817   0.345  C13  PQY   9  
PQY  C1   C8   C  0  1  N  N  N  32.553  -11.021   8.918  -1.285   1.552  -1.181  C1   PQY  10  
PQY  C11  C9   C  0  1  N  N  N  37.217  -12.702  13.639  -7.125  -0.869   0.451  C11  PQY  11  
PQY  C12  C10  C  0  1  N  N  N  29.490  -14.385   4.911   5.705  -0.876   0.073  C12  PQY  12  
PQY  C2   C11  C  0  1  N  N  N  31.158  -11.149   8.355  -0.140   0.652  -1.691  C2   PQY  13  
PQY  C3   C12  C  0  1  N  N  N  30.566  -12.582   8.330   1.171   1.251  -1.452  C3   PQY  14  
PQY  C9   C13  C  0  1  N  N  N  34.165  -12.849  11.396  -3.495   0.169   0.038  C9   PQY  15  
PQY  N2   N3   N  0  1  N  N  N  31.258  -13.483   7.756   1.432   1.470  -0.011  N2   PQY  16  
PQY  N4   N4   N  0  1  N  N  N  30.665  -15.142   5.342   4.940   0.220   0.251  N4   PQY  17  
PQY  N5   N5   N  0  1  N  N  N  29.600  -15.626   2.941   7.887  -1.869   0.175  N5   PQY  18  
PQY  N6   N6   N  0  1  N  N  N  38.385  -12.284  13.719  -7.908  -1.807   0.029  N6   PQY  19  
PQY  O1   O1   O  0  1  N  N  N  36.953  -11.592  11.662  -5.286  -1.697  -0.725  O1   PQY  20  
PQY  O2   O2   O  0  1  N  N  N  28.976  -13.568   5.594   5.200  -1.913  -0.312  O2   PQY  21  
PQY  O3   O3   O  0  1  N  N  N  29.238  -16.074   1.702   9.278  -1.812   0.436  O3   PQY  22  
PQY  O4   O4   O  0  1  N  N  N  39.078  -12.818  14.754  -9.263  -1.836   0.439  O4   PQY  23  
PQY  H2   H2   H  0  1  N  N  N  34.392  -11.926  13.275  -5.237   0.823   1.060  H2   PQY  24  
PQY  H3   H3   H  0  1  N  N  N  31.889  -14.187   9.470   0.669   3.351  -0.417  H3   PQY  25  
PQY  H4   H4   H  0  1  N  N  N  32.689  -14.799   7.983   1.392   3.155   1.189  H4   PQY  26  
PQY  H5   H5   H  0  1  N  N  N  34.298  -13.407   9.004  -1.181   3.336   1.048  H5   PQY  27  
PQY  H6   H6   H  0  1  N  N  N  33.585  -12.381   7.714  -0.502   2.040   2.047  H6   PQY  28  
PQY  H7   H7   H  0  1  N  N  N  32.472  -12.590   6.453   3.037   1.796   1.304  H7   PQY  29  
PQY  H8   H8   H  0  1  N  N  N  30.746  -12.740   5.980   3.335   2.278  -0.384  H8   PQY  30  
PQY  H9   H9   H  0  1  N  N  N  32.472  -15.220   6.373   3.041  -0.588   0.624  H9   PQY  31  
PQY  H10  H10  H  0  1  N  N  N  32.502  -14.309   4.825   3.339  -0.107  -1.063  H10  PQY  32  
PQY  H11  H11  H  0  1  N  N  N  34.857  -11.654   9.748  -2.844   1.287   1.760  H11  PQY  33  
PQY  H12  H12  H  0  1  N  N  N  33.706  -10.821  10.847  -3.289   2.289   0.359  H12  PQY  34  
PQY  H13  H13  H  0  1  N  N  N  28.058  -14.276   3.108   7.602   0.104   0.687  H13  PQY  35  
PQY  H15  H15  H  0  1  N  N  N  33.243  -10.826   8.084  -2.222   1.253  -1.650  H15  PQY  36  
PQY  H16  H16  H  0  1  N  N  N  32.566  -10.168   9.612  -1.071   2.593  -1.424  H16  PQY  37  
PQY  H17  H17  H  0  1  N  N  N  36.823  -13.423  14.340  -7.504  -0.107   1.116  H17  PQY  38  
PQY  H19  H19  H  0  1  N  N  N  31.176  -10.774   7.321  -0.191  -0.309  -1.180  H19  PQY  39  
PQY  H20  H20  H  0  1  N  N  N  30.491  -10.519   8.962  -0.266   0.491  -2.762  H20  PQY  40  
PQY  H21  H21  H  0  1  N  N  N  29.595  -12.531   7.815   1.940   0.590  -1.854  H21  PQY  41  
PQY  H22  H22  H  0  1  N  N  N  30.412  -12.896   9.373   1.222   2.209  -1.970  H22  PQY  42  
PQY  H23  H23  H  0  1  N  N  N  33.197  -13.223  11.760  -3.000  -0.749   0.354  H23  PQY  43  
PQY  H24  H24  H  0  1  N  N  N  34.739  -13.680  10.961  -3.445   0.252  -1.048  H24  PQY  44  
PQY  H26  H26  H  0  1  N  N  N  30.598  -16.139   5.373   5.343   1.047   0.558  H26  PQY  45  
PQY  H29  H29  H  0  1  N  N  N  29.852  -16.739   1.413   9.741  -2.646   0.280  H29  PQY  46  
PQY  H30  H30  H  0  1  N  N  N  39.959  -12.462  14.763  -9.770  -2.574   0.073  H30  PQY  47  
#   #
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
PQY  O3   N5   SING  N  N   1  
PQY  N5   C13  DOUB  N  E   2  
PQY  C13  C12  SING  N  N   3  
PQY  C12  N4   SING  N  N   4  
PQY  C12  O2   DOUB  N  N   5  
PQY  N4   C7   SING  N  N   6  
PQY  C7   C6   SING  N  N   7  
PQY  C6   N2   SING  N  N   8  
PQY  N2   C3   SING  N  N   9  
PQY  N2   C4   SING  N  N  10  
PQY  C3   C2   SING  N  N  11  
PQY  C2   C1   SING  N  N  12  
PQY  C4   C5   SING  N  N  13  
PQY  C5   N1   SING  N  N  14  
PQY  C1   N1   SING  N  N  15  
PQY  N1   C8   SING  N  N  16  
PQY  C8   C9   SING  N  N  17  
PQY  C9   N3   SING  N  N  18  
PQY  O1   C10  DOUB  N  N  19  
PQY  N3   C10  SING  N  N  20  
PQY  C10  C11  SING  N  N  21  
PQY  C11  N6   DOUB  N  E  22  
PQY  N6   O4   SING  N  N  23  
PQY  N3   H2   SING  N  N  24  
PQY  C4   H3   SING  N  N  25  
PQY  C4   H4   SING  N  N  26  
PQY  C5   H5   SING  N  N  27  
PQY  C5   H6   SING  N  N  28  
PQY  C6   H7   SING  N  N  29  
PQY  C6   H8   SING  N  N  30  
PQY  C7   H9   SING  N  N  31  
PQY  C7   H10  SING  N  N  32  
PQY  C8   H11  SING  N  N  33  
PQY  C8   H12  SING  N  N  34  
PQY  C13  H13  SING  N  N  35  
PQY  C1   H15  SING  N  N  36  
PQY  C1   H16  SING  N  N  37  
PQY  C11  H17  SING  N  N  38  
PQY  C2   H19  SING  N  N  39  
PQY  C2   H20  SING  N  N  40  
PQY  C3   H21  SING  N  N  41  
PQY  C3   H22  SING  N  N  42  
PQY  C9   H23  SING  N  N  43  
PQY  C9   H24  SING  N  N  44  
PQY  N4   H26  SING  N  N  45  
PQY  O3   H29  SING  N  N  46  
PQY  O4   H30  SING  N  N  47  
#   #
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
PQY  SMILES            ACDLabs               12.01  "N1(CCNC(\C=N\O)=O)CCN(CCNC([C@H]=NO)=O)CCC1"  
PQY  InChI             InChI                 1.03   "InChI=1S/C13H24N6O4/c20-12(10-16-22)14-2-6-18-4-1-5-19(9-8-18)7-3-15-13(21)11-17-23/h10-11,22-23H,1-9H2,(H,14,20)(H,15,21)/b16-10+,17-11+"  
PQY  InChIKey          InChI                 1.03   DFNMYOZHKNITMF-OTYYAQKOSA-N  
PQY  SMILES_CANONICAL  CACTVS                3.385  "O\N=C\C(=O)NCCN1CCCN(CCNC(=O)\C=N\O)CC1"  
PQY  SMILES            CACTVS                3.385  "ON=CC(=O)NCCN1CCCN(CCNC(=O)C=NO)CC1"  
PQY  SMILES_CANONICAL  "OpenEye OEToolkits"  2.0.7  "C1CN(CCN(C1)CCNC(=O)/C=N/O)CCNC(=O)/C=N/O"  
PQY  SMILES            "OpenEye OEToolkits"  2.0.7  "C1CN(CCN(C1)CCNC(=O)C=NO)CCNC(=O)C=NO"  
#   #
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
PQY  "SYSTEMATIC NAME"  ACDLabs               12.01  "(2E,2'E)-N,N'-[1,4-diazepane-1,4-diyldi(ethane-2,1-diyl)]bis[2-(hydroxyimino)acetamide]"  
PQY  "SYSTEMATIC NAME"  "OpenEye OEToolkits"  2.0.7  "(2~{E})-2-hydroxyimino-~{N}-[2-[4-[2-[[(2~{E})-2-hydroxyiminoethanoyl]amino]ethyl]-1,4-diazepan-1-yl]ethyl]ethanamide"  
#   #
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
PQY  "Create component"  2019-08-23  RCSB  
PQY  "Initial release"   2020-02-12  RCSB  
##
