data_OMY
# 
_chem_comp.id                                    OMY 
_chem_comp.name                                  "(betaR)-3-chloro-beta-hydroxy-L-tyrosine" 
_chem_comp.type                                  "L-PEPTIDE LINKING" 
_chem_comp.pdbx_type                             ATOMP 
_chem_comp.formula                               "C9 H10 Cl N O4" 
_chem_comp.mon_nstd_parent_comp_id               TYR 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2009-03-27 
_chem_comp.pdbx_modified_date                    2024-09-27 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        231.633 
_chem_comp.one_letter_code                       Y 
_chem_comp.three_letter_code                     OMY 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        2WDX 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  EBI 
_chem_comp.pdbx_pcm                              Y 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.pdbx_backbone_atom_flag 
_chem_comp_atom.pdbx_n_terminal_atom_flag 
_chem_comp_atom.pdbx_c_terminal_atom_flag 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
OMY N   N   N  0 1 N N N Y Y N 12.595 28.918 44.560 2.020  0.981  1.356  N   OMY 1  
OMY CA  CA  C  0 1 N N S Y N N 11.101 28.957 44.503 2.155  -0.270 0.599  CA  OMY 2  
OMY OCZ OCZ O  0 1 N N N N N N 14.142 23.474 43.734 -3.970 1.236  0.379  OCZ OMY 3  
OMY CE2 CE2 C  0 1 Y N N N N N 13.552 25.257 45.213 -1.713 1.888  0.004  CE2 OMY 4  
OMY CE1 CE1 C  0 1 Y N N N N N 11.999 24.757 43.414 -2.328 -0.434 -0.047 CE1 OMY 5  
OMY CZ  CZ  C  0 1 Y N N N N N 13.228 24.478 44.099 -2.680 0.900  0.114  CZ  OMY 6  
OMY CG  CG  C  0 1 Y N N N N N 11.470 26.588 44.972 -0.053 0.214  -0.420 CG  OMY 7  
OMY CD2 CD2 C  0 1 Y N N N N N 12.684 26.271 45.628 -0.403 1.543  -0.266 CD2 OMY 8  
OMY CD1 CD1 C  0 1 Y N N N N N 11.140 25.808 43.842 -1.016 -0.773 -0.317 CD1 OMY 9  
OMY CB  CB  C  0 1 N N R N N N 10.592 27.808 45.497 1.377  -0.158 -0.714 CB  OMY 10 
OMY CL  CL  CL 0 0 N N N N N N 11.532 23.823 42.007 -3.536 -1.674 0.091  CL  OMY 11 
OMY O   O   O  0 1 N N N Y N Y 11.643 31.186 45.338 4.402  0.391  0.343  O   OMY 12 
OMY C   C   C  0 1 N N N Y N Y 10.796 30.521 44.731 3.611  -0.521 0.300  C   OMY 13 
OMY ODE ODE O  0 1 N N N N N N 10.996 27.939 46.971 1.972  0.848  -1.536 ODE OMY 14 
OMY OXT OXT O  0 1 N Y N Y N Y 9.751  31.197 44.177 4.028  -1.758 -0.014 OXT OMY 15 
OMY H   HN1 H  0 1 N N N Y Y N 12.964 28.909 43.631 2.382  1.763  0.831  HN1 OMY 16 
OMY H2  HN2 H  0 1 N Y N Y Y N 12.931 29.726 45.045 1.060  1.139  1.625  HN2 OMY 17 
OMY HA  HA  H  0 1 N N N Y N N 10.541 28.697 43.592 1.757  -1.096 1.187  HA  OMY 18 
OMY HCZ HCZ H  0 1 N N N N N N 14.348 23.554 42.810 -4.505 1.396  -0.410 HCZ OMY 19 
OMY HE2 HE2 H  0 1 N N N N N N 14.470 25.076 45.752 -1.985 2.926  0.124  HE2 OMY 20 
OMY HD2 HD2 H  0 1 N N N N N N 12.955 26.847 46.501 0.350  2.313  -0.356 HD2 OMY 21 
OMY HD1 HD1 H  0 1 N N N N N N 10.229 26.011 43.298 -0.742 -1.809 -0.447 HD1 OMY 22 
OMY HB  HB  H  0 1 N N N N N N 9.493  27.773 45.487 1.404  -1.115 -1.235 HB  OMY 23 
OMY HXT HXT H  0 1 N Y N Y N Y 9.844  32.126 44.355 4.971  -1.870 -0.197 HXT OMY 24 
OMY HDE HDE H  0 1 N N N N N N 11.943 27.966 47.039 1.983  1.728  -1.135 HDE OMY 25 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
OMY N   CA  SING N N 1  
OMY OCZ CZ  SING N N 2  
OMY CZ  CE2 SING Y N 3  
OMY CZ  CE1 DOUB Y N 4  
OMY CE2 CD2 DOUB Y N 5  
OMY CD2 CG  SING Y N 6  
OMY CG  CD1 DOUB Y N 7  
OMY CG  CB  SING N N 8  
OMY CD1 CE1 SING Y N 9  
OMY CE1 CL  SING N N 10 
OMY C   O   DOUB N N 11 
OMY C   CA  SING N N 12 
OMY C   OXT SING N N 13 
OMY CA  CB  SING N N 14 
OMY CB  ODE SING N N 15 
OMY N   H   SING N N 16 
OMY N   H2  SING N N 17 
OMY CA  HA  SING N N 18 
OMY OCZ HCZ SING N N 19 
OMY CE2 HE2 SING N N 20 
OMY CD2 HD2 SING N N 21 
OMY CD1 HD1 SING N N 22 
OMY CB  HB  SING N N 23 
OMY OXT HXT SING N N 24 
OMY ODE HDE SING N N 25 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
OMY SMILES           ACDLabs              10.04 "Clc1cc(ccc1O)C(O)C(C(=O)O)N"                                                                            
OMY SMILES_CANONICAL CACTVS               3.352 "N[C@@H]([C@H](O)c1ccc(O)c(Cl)c1)C(O)=O"                                                                 
OMY SMILES           CACTVS               3.352 "N[CH]([CH](O)c1ccc(O)c(Cl)c1)C(O)=O"                                                                    
OMY SMILES_CANONICAL "OpenEye OEToolkits" 1.6.1 "c1cc(c(cc1[C@H]([C@@H](C(=O)O)N)O)Cl)O"                                                                 
OMY SMILES           "OpenEye OEToolkits" 1.6.1 "c1cc(c(cc1C(C(C(=O)O)N)O)Cl)O"                                                                          
OMY InChI            InChI                1.03  "InChI=1S/C9H10ClNO4/c10-5-3-4(1-2-6(5)12)8(13)7(11)9(14)15/h1-3,7-8,12-13H,11H2,(H,14,15)/t7-,8+/m0/s1" 
OMY InChIKey         InChI                1.03  BACZBJKOFPGENQ-JGVFFNPUSA-N                                                                              
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
OMY "SYSTEMATIC NAME" ACDLabs              10.04 "(betaR)-3-chloro-beta-hydroxy-L-tyrosine"                               
OMY "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.6.1 "(2S,3R)-2-amino-3-(3-chloro-4-hydroxy-phenyl)-3-hydroxy-propanoic acid" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
OMY "Create component"     2009-03-27 EBI  
OMY "Modify aromatic_flag" 2011-06-04 RCSB 
OMY "Modify descriptor"    2011-06-04 RCSB 
OMY "Other modification"   2019-04-16 PDBE 
OMY "Modify backbone"      2023-11-03 PDBE 
OMY "Modify PCM"           2024-09-27 PDBE 
# 
loop_
_pdbx_chem_comp_pcm.pcm_id 
_pdbx_chem_comp_pcm.comp_id 
_pdbx_chem_comp_pcm.modified_residue_id 
_pdbx_chem_comp_pcm.type 
_pdbx_chem_comp_pcm.category 
_pdbx_chem_comp_pcm.position 
_pdbx_chem_comp_pcm.polypeptide_position 
_pdbx_chem_comp_pcm.comp_id_linking_atom 
_pdbx_chem_comp_pcm.modified_residue_id_linking_atom 
_pdbx_chem_comp_pcm.uniprot_specific_ptm_accession 
_pdbx_chem_comp_pcm.uniprot_generic_ptm_accession 
1 OMY TYR Hydroxylation "Named protein modification" "Amino-acid side chain" "Any position" ? ? ? ? 
2 OMY TYR Chlorination  "Named protein modification" "Amino-acid side chain" "Any position" ? ? ? ? 
# 
