data_M9Y
#

_chem_comp.id                                   M9Y
_chem_comp.name                                 "3-(2-{1-[2-(piperidin-4-yl)ethyl]-1H-indol-5-yl}-5-[1-(pyrrolidin-1-yl)cyclohexyl]-1,3-thiazol-4-yl)-N-(2,2,2-trifluoroethyl)prop-2-yn-1-amine"
_chem_comp.type                                 NON-POLYMER
_chem_comp.pdbx_type                            HETAIN
_chem_comp.formula                              "C33 H42 F3 N5 S"
_chem_comp.mon_nstd_parent_comp_id              ?
_chem_comp.pdbx_synonyms                        ?
_chem_comp.pdbx_formal_charge                   0
_chem_comp.pdbx_initial_date                    2019-03-28
_chem_comp.pdbx_modified_date                   2019-07-26
_chem_comp.pdbx_ambiguous_flag                  N
_chem_comp.pdbx_release_status                  REL
_chem_comp.pdbx_replaced_by                     ?
_chem_comp.pdbx_replaces                        ?
_chem_comp.formula_weight                       597.780
_chem_comp.one_letter_code                      ?
_chem_comp.three_letter_code                    M9Y
_chem_comp.pdbx_model_coordinates_details       ?
_chem_comp.pdbx_model_coordinates_missing_flag  N
_chem_comp.pdbx_ideal_coordinates_details       Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag  N
_chem_comp.pdbx_model_coordinates_db_code       6OEX
_chem_comp.pdbx_subcomponent_list               ?
_chem_comp.pdbx_processing_site                 RCSB
#   #
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
M9Y  F2   F1   F  0  1  N  N  N  -0.972  -16.925  -47.427    7.935   5.612   0.389  F2   M9Y   1  
M9Y  C    C1   C  0  1  N  N  N  -1.977  -16.816  -48.220    6.709   4.947   0.280  C    M9Y   2  
M9Y  F    F2   F  0  1  N  N  N  -3.010  -17.172  -47.550    5.881   5.317   1.345  F    M9Y   3  
M9Y  F1   F3   F  0  1  N  N  N  -1.831  -17.703  -49.129    6.096   5.295  -0.929  F1   M9Y   4  
M9Y  C1   C2   C  0  1  N  N  N  -2.110  -15.442  -48.773    6.944   3.436   0.316  C1   M9Y   5  
M9Y  N    N1   N  0  1  N  N  N  -2.114  -14.433  -47.718    5.656   2.738   0.201  N    M9Y   6  
M9Y  C2   C3   C  0  1  N  N  N  -3.337  -14.402  -46.931    5.843   1.281   0.233  C2   M9Y   7  
M9Y  C3   C4   C  0  1  N  N  N  -3.703  -13.050  -46.492    4.535   0.616   0.116  C3   M9Y   8  
M9Y  C4   C5   C  0  1  N  N  N  -3.916  -11.920  -46.172    3.491   0.086   0.023  C4   M9Y   9  
M9Y  C5   C6   C  0  1  Y  N  N  -4.139  -10.587  -45.815    2.219  -0.561  -0.091  C5   M9Y  10  
M9Y  N3   N2   N  0  1  Y  N  N  -3.834   -9.622  -46.715    1.089   0.116  -0.210  N3   M9Y  11  
M9Y  C7   C7   C  0  1  Y  N  N  -4.072   -8.440  -46.214   -0.007  -0.575  -0.306  C7   M9Y  12  
M9Y  S    S1   S  0  1  Y  N  N  -4.674   -8.461  -44.615    0.377  -2.293  -0.245  S    M9Y  13  
M9Y  C6   C8   C  0  1  Y  N  N  -4.627  -10.149  -44.619    2.089  -1.905  -0.091  C6   M9Y  14  
M9Y  C23  C9   C  0  1  N  N  N  -5.199  -10.817  -43.497    3.214  -2.902   0.025  C23  M9Y  15  
M9Y  C32  C10  C  0  1  N  N  N  -6.040   -9.822  -42.678    4.163  -2.740  -1.164  C32  M9Y  16  
M9Y  C31  C11  C  0  1  N  N  N  -7.036  -10.454  -41.730    5.305  -3.751  -1.046  C31  M9Y  17  
M9Y  C30  C12  C  0  1  N  N  N  -7.908  -11.396  -42.450    6.071  -3.507   0.255  C30  M9Y  18  
M9Y  C29  C13  C  0  1  N  N  N  -7.094  -12.508  -42.994    5.122  -3.669   1.444  C29  M9Y  19  
M9Y  C28  C14  C  0  1  N  N  N  -6.065  -11.996  -43.984    3.980  -2.657   1.327  C28  M9Y  20  
M9Y  N4   N3   N  0  1  N  N  N  -4.075  -11.293  -42.658    2.663  -4.264   0.030  N4   M9Y  21  
M9Y  C27  C15  C  0  1  N  N  N  -3.513  -10.362  -41.670    1.872  -4.520  -1.193  C27  M9Y  22  
M9Y  C26  C16  C  0  1  N  N  N  -2.021  -10.620  -41.690    0.712  -5.451  -0.794  C26  M9Y  23  
M9Y  C25  C17  C  0  1  N  N  N  -1.876  -11.899  -42.236    0.879  -5.676   0.726  C25  M9Y  24  
M9Y  C24  C18  C  0  1  N  N  N  -2.922  -11.924  -43.302    1.725  -4.455   1.166  C24  M9Y  25  
M9Y  C8   C19  C  0  1  Y  N  N  -3.866   -7.188  -46.948   -1.365  -0.008  -0.446  C8   M9Y  26  
M9Y  C22  C20  C  0  1  Y  N  N  -4.316   -5.980  -46.422   -1.542   1.370  -0.483  C22  M9Y  27  
M9Y  C21  C21  C  0  1  Y  N  N  -4.111   -4.802  -47.132   -2.828   1.892  -0.614  C21  M9Y  28  
M9Y  C11  C22  C  0  1  Y  N  N  -3.461   -4.864  -48.372   -3.933   1.025  -0.709  C11  M9Y  29  
M9Y  C10  C23  C  0  1  Y  N  N  -3.009   -6.058  -48.893   -3.733  -0.352  -0.670  C10  M9Y  30  
M9Y  C9   C24  C  0  1  Y  N  N  -3.218   -7.213  -48.172   -2.472  -0.860  -0.546  C9   M9Y  31  
M9Y  C20  C25  C  0  1  Y  N  N  -4.431   -3.436  -46.904   -3.372   3.251  -0.687  C20  M9Y  32  
M9Y  C19  C26  C  0  1  Y  N  N  -3.991   -2.741  -47.975   -4.703   3.134  -0.814  C19  M9Y  33  
M9Y  N1   N4   N  0  1  Y  N  N  -3.409   -3.584  -48.882   -5.056   1.812  -0.828  N1   M9Y  34  
M9Y  C12  C27  C  0  1  N  N  N  -2.873   -3.222  -50.194   -6.426   1.309  -0.953  C12  M9Y  35  
M9Y  C13  C28  C  0  1  N  N  N  -3.854   -2.382  -50.995   -6.998   1.037   0.439  C13  M9Y  36  
M9Y  C14  C29  C  0  1  N  N  N  -4.762   -3.123  -51.970   -8.430   0.511   0.309  C14  M9Y  37  
M9Y  C18  C30  C  0  1  N  N  N  -5.574   -2.162  -52.833   -9.324   1.605  -0.282  C18  M9Y  38  
M9Y  C17  C31  C  0  1  N  N  N  -6.809   -1.632  -52.143  -10.765   1.095  -0.354  C17  M9Y  39  
M9Y  N2   N5   N  0  1  N  N  N  -7.667   -2.735  -51.743  -11.226   0.735   0.994  N2   M9Y  40  
M9Y  C16  C32  C  0  1  N  N  N  -7.003   -3.544  -50.741  -10.411  -0.346   1.562  C16  M9Y  41  
M9Y  C15  C33  C  0  1  N  N  N  -5.698   -4.104  -51.272   -8.959   0.121   1.691  C15  M9Y  42  
M9Y  H1   H1   H  0  1  N  N  N  -1.265  -15.247  -49.450    7.588   3.148  -0.514  H1   M9Y  43  
M9Y  H2   H2   H  0  1  N  N  N  -3.053  -15.374  -49.335    7.421   3.165   1.258  H2   M9Y  44  
M9Y  H3   H3   H  0  1  N  N  N  -1.349  -14.620  -47.102    5.017   3.036   0.923  H3   M9Y  45  
M9Y  H5   H5   H  0  1  N  N  N  -4.157  -14.806  -47.542    6.480   0.978  -0.598  H5   M9Y  46  
M9Y  H6   H6   H  0  1  N  N  N  -3.197  -15.034  -46.041    6.313   0.995   1.174  H6   M9Y  47  
M9Y  H7   H7   H  0  1  N  N  N  -5.352   -9.201  -42.086    3.617  -2.914  -2.091  H7   M9Y  48  
M9Y  H8   H8   H  0  1  N  N  N  -6.596   -9.185  -43.382    4.572  -1.729  -1.168  H8   M9Y  49  
M9Y  H9   H9   H  0  1  N  N  N  -6.492  -10.995  -40.942    4.896  -4.762  -1.043  H9   M9Y  50  
M9Y  H10  H10  H  0  1  N  N  N  -7.653   -9.665  -41.275    5.981  -3.636  -1.893  H10  M9Y  51  
M9Y  H11  H11  H  0  1  N  N  N  -8.411  -10.872  -43.276    6.885  -4.227   0.339  H11  M9Y  52  
M9Y  H12  H12  H  0  1  N  N  N  -8.663  -11.799  -41.758    6.480  -2.496   0.251  H12  M9Y  53  
M9Y  H13  H13  H  0  1  N  N  N  -7.757  -13.224  -43.502    4.713  -4.679   1.448  H13  M9Y  54  
M9Y  H14  H14  H  0  1  N  N  N  -6.576  -13.013  -42.166    5.668  -3.494   2.371  H14  M9Y  55  
M9Y  H15  H15  H  0  1  N  N  N  -6.599  -11.672  -44.890    4.389  -1.646   1.323  H15  M9Y  56  
M9Y  H16  H16  H  0  1  N  N  N  -5.392  -12.829  -44.234    3.304  -2.772   2.174  H16  M9Y  57  
M9Y  H18  H18  H  0  1  N  N  N  -3.729   -9.321  -41.953    1.478  -3.582  -1.584  H18  M9Y  58  
M9Y  H19  H19  H  0  1  N  N  N  -3.926  -10.563  -40.671    2.497  -5.002  -1.945  H19  M9Y  59  
M9Y  H20  H20  H  0  1  N  N  N  -1.610  -10.587  -40.670   -0.245  -4.973  -1.003  H20  M9Y  60  
M9Y  H21  H21  H  0  1  N  N  N  -1.509   -9.874  -42.315    0.786  -6.398  -1.329  H21  M9Y  61  
M9Y  H22  H22  H  0  1  N  N  N  -2.062  -12.676  -41.480   -0.090  -5.674   1.225  H22  M9Y  62  
M9Y  H23  H23  H  0  1  N  N  N  -0.872  -12.036  -42.663    1.411  -6.607   0.922  H23  M9Y  63  
M9Y  H24  H24  H  0  1  N  N  N  -3.154  -12.957  -43.602    2.272  -4.675   2.083  H24  M9Y  64  
M9Y  H25  H25  H  0  1  N  N  N  -2.600  -11.350  -44.183    1.094  -3.576   1.295  H25  M9Y  65  
M9Y  H26  H26  H  0  1  N  N  N  -4.821   -5.958  -45.468   -0.691   2.031  -0.410  H26  M9Y  66  
M9Y  H27  H27  H  0  1  N  N  N  -2.502   -6.087  -49.846   -4.578  -1.021  -0.741  H27  M9Y  67  
M9Y  H28  H28  H  0  1  N  N  N  -2.870   -8.155  -48.568   -2.328  -1.930  -0.517  H28  M9Y  68  
M9Y  H29  H29  H  0  1  N  N  N  -4.932   -3.030  -46.037   -2.809   4.172  -0.646  H29  M9Y  69  
M9Y  H30  H30  H  0  1  N  N  N  -4.085   -1.672  -48.098   -5.393   3.961  -0.892  H30  M9Y  70  
M9Y  H31  H31  H  0  1  N  N  N  -2.653   -4.143  -50.754   -7.042   2.053  -1.460  H31  M9Y  71  
M9Y  H32  H32  H  0  1  N  N  N  -1.945   -2.648  -50.053   -6.423   0.385  -1.532  H32  M9Y  72  
M9Y  H33  H33  H  0  1  N  N  N  -3.270   -1.652  -51.574   -6.383   0.293   0.946  H33  M9Y  73  
M9Y  H34  H34  H  0  1  N  N  N  -4.498   -1.851  -50.279   -7.002   1.961   1.018  H34  M9Y  74  
M9Y  H35  H35  H  0  1  N  N  N  -4.117   -3.706  -52.644   -8.439  -0.361  -0.345  H35  M9Y  75  
M9Y  H36  H36  H  0  1  N  N  N  -5.885   -2.691  -53.746   -9.283   2.491   0.352  H36  M9Y  76  
M9Y  H37  H37  H  0  1  N  N  N  -4.933   -1.310  -53.103   -8.977   1.857  -1.284  H37  M9Y  77  
M9Y  H38  H38  H  0  1  N  N  N  -6.511   -1.060  -51.252  -11.407   1.876  -0.760  H38  M9Y  78  
M9Y  H39  H39  H  0  1  N  N  N  -7.358   -0.975  -52.833  -10.808   0.217  -0.998  H39  M9Y  79  
M9Y  H40  H40  H  0  1  N  N  N  -8.518   -2.371  -51.364  -11.232   1.541   1.601  H40  M9Y  80  
M9Y  H42  H42  H  0  1  N  N  N  -6.795   -2.923  -49.857  -10.796  -0.611   2.547  H42  M9Y  81  
M9Y  H43  H43  H  0  1  N  N  N  -7.663   -4.377  -50.456  -10.456  -1.217   0.909  H43  M9Y  82  
M9Y  H44  H44  H  0  1  N  N  N  -5.945   -4.898  -51.992   -8.352  -0.687   2.099  H44  M9Y  83  
M9Y  H45  H45  H  0  1  N  N  N  -5.151   -4.538  -50.422   -8.912   0.983   2.356  H45  M9Y  84  
#   #
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
M9Y  C18  C17  SING  N  N   1  
M9Y  C18  C14  SING  N  N   2  
M9Y  C17  N2   SING  N  N   3  
M9Y  C14  C15  SING  N  N   4  
M9Y  C14  C13  SING  N  N   5  
M9Y  N2   C16  SING  N  N   6  
M9Y  C15  C16  SING  N  N   7  
M9Y  C13  C12  SING  N  N   8  
M9Y  C12  N1   SING  N  N   9  
M9Y  F1   C    SING  N  N  10  
M9Y  C10  C11  DOUB  Y  N  11  
M9Y  C10  C9   SING  Y  N  12  
M9Y  N1   C11  SING  Y  N  13  
M9Y  N1   C19  SING  Y  N  14  
M9Y  C1   C    SING  N  N  15  
M9Y  C1   N    SING  N  N  16  
M9Y  C11  C21  SING  Y  N  17  
M9Y  C    F    SING  N  N  18  
M9Y  C    F2   SING  N  N  19  
M9Y  C9   C8   DOUB  Y  N  20  
M9Y  C19  C20  DOUB  Y  N  21  
M9Y  N    C2   SING  N  N  22  
M9Y  C21  C20  SING  Y  N  23  
M9Y  C21  C22  DOUB  Y  N  24  
M9Y  C8   C22  SING  Y  N  25  
M9Y  C8   C7   SING  N  N  26  
M9Y  C2   C3   SING  N  N  27  
M9Y  N3   C7   DOUB  Y  N  28  
M9Y  N3   C5   SING  Y  N  29  
M9Y  C3   C4   TRIP  N  N  30  
M9Y  C7   S    SING  Y  N  31  
M9Y  C4   C5   SING  N  N  32  
M9Y  C5   C6   DOUB  Y  N  33  
M9Y  C6   S    SING  Y  N  34  
M9Y  C6   C23  SING  N  N  35  
M9Y  C28  C23  SING  N  N  36  
M9Y  C28  C29  SING  N  N  37  
M9Y  C23  C32  SING  N  N  38  
M9Y  C23  N4   SING  N  N  39  
M9Y  C24  N4   SING  N  N  40  
M9Y  C24  C25  SING  N  N  41  
M9Y  C29  C30  SING  N  N  42  
M9Y  C32  C31  SING  N  N  43  
M9Y  N4   C27  SING  N  N  44  
M9Y  C30  C31  SING  N  N  45  
M9Y  C25  C26  SING  N  N  46  
M9Y  C26  C27  SING  N  N  47  
M9Y  C1   H1   SING  N  N  48  
M9Y  C1   H2   SING  N  N  49  
M9Y  N    H3   SING  N  N  50  
M9Y  C2   H5   SING  N  N  51  
M9Y  C2   H6   SING  N  N  52  
M9Y  C32  H7   SING  N  N  53  
M9Y  C32  H8   SING  N  N  54  
M9Y  C31  H9   SING  N  N  55  
M9Y  C31  H10  SING  N  N  56  
M9Y  C30  H11  SING  N  N  57  
M9Y  C30  H12  SING  N  N  58  
M9Y  C29  H13  SING  N  N  59  
M9Y  C29  H14  SING  N  N  60  
M9Y  C28  H15  SING  N  N  61  
M9Y  C28  H16  SING  N  N  62  
M9Y  C27  H18  SING  N  N  63  
M9Y  C27  H19  SING  N  N  64  
M9Y  C26  H20  SING  N  N  65  
M9Y  C26  H21  SING  N  N  66  
M9Y  C25  H22  SING  N  N  67  
M9Y  C25  H23  SING  N  N  68  
M9Y  C24  H24  SING  N  N  69  
M9Y  C24  H25  SING  N  N  70  
M9Y  C22  H26  SING  N  N  71  
M9Y  C10  H27  SING  N  N  72  
M9Y  C9   H28  SING  N  N  73  
M9Y  C20  H29  SING  N  N  74  
M9Y  C19  H30  SING  N  N  75  
M9Y  C12  H31  SING  N  N  76  
M9Y  C12  H32  SING  N  N  77  
M9Y  C13  H33  SING  N  N  78  
M9Y  C13  H34  SING  N  N  79  
M9Y  C14  H35  SING  N  N  80  
M9Y  C18  H36  SING  N  N  81  
M9Y  C18  H37  SING  N  N  82  
M9Y  C17  H38  SING  N  N  83  
M9Y  C17  H39  SING  N  N  84  
M9Y  N2   H40  SING  N  N  85  
M9Y  C16  H42  SING  N  N  86  
M9Y  C16  H43  SING  N  N  87  
M9Y  C15  H44  SING  N  N  88  
M9Y  C15  H45  SING  N  N  89  
#   #
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
M9Y  SMILES            ACDLabs               12.01  "FC(F)(F)CNCC#Cc1c(sc(n1)c3cc2ccn(c2cc3)CCC4CCNCC4)C5(CCCCC5)N6CCCC6"  
M9Y  InChI             InChI                 1.03   "InChI=1S/C33H42F3N5S/c34-33(35,36)24-38-16-6-7-28-30(32(14-2-1-3-15-32)41-19-4-5-20-41)42-31(39-28)27-8-9-29-26(23-27)13-22-40(29)21-12-25-10-17-37-18-11-25/h8-9,13,22-23,25,37-38H,1-5,10-12,14-21,24H2"  
M9Y  InChIKey          InChI                 1.03   RQISOXZUFXHDIM-UHFFFAOYSA-N  
M9Y  SMILES_CANONICAL  CACTVS                3.385  "FC(F)(F)CNCC#Cc1nc(sc1C2(CCCCC2)N3CCCC3)c4ccc5n(CCC6CCNCC6)ccc5c4"  
M9Y  SMILES            CACTVS                3.385  "FC(F)(F)CNCC#Cc1nc(sc1C2(CCCCC2)N3CCCC3)c4ccc5n(CCC6CCNCC6)ccc5c4"  
M9Y  SMILES_CANONICAL  "OpenEye OEToolkits"  2.0.7  "c1cc2c(ccn2CCC3CCNCC3)cc1c4nc(c(s4)C5(CCCCC5)N6CCCC6)C#CCNCC(F)(F)F"  
M9Y  SMILES            "OpenEye OEToolkits"  2.0.7  "c1cc2c(ccn2CCC3CCNCC3)cc1c4nc(c(s4)C5(CCCCC5)N6CCCC6)C#CCNCC(F)(F)F"  
#   #
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
M9Y  "SYSTEMATIC NAME"  ACDLabs               12.01  "3-(2-{1-[2-(piperidin-4-yl)ethyl]-1H-indol-5-yl}-5-[1-(pyrrolidin-1-yl)cyclohexyl]-1,3-thiazol-4-yl)-N-(2,2,2-trifluoroethyl)prop-2-yn-1-amine"  
M9Y  "SYSTEMATIC NAME"  "OpenEye OEToolkits"  2.0.7  "3-[2-[1-(2-piperidin-4-ylethyl)indol-5-yl]-5-(1-pyrrolidin-1-ylcyclohexyl)-1,3-thiazol-4-yl]-~{N}-[2,2,2-tris(fluoranyl)ethyl]prop-2-yn-1-amine"  
#   #
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
M9Y  "Create component"  2019-03-28  RCSB  
M9Y  "Initial release"   2019-07-31  RCSB  
##
