data_L1Y
#

_chem_comp.id                                   L1Y
_chem_comp.name                                 "4-[(1S,2R)-2-(carboxymethyl)cyclopentane-1-carbonyl]benzoic acid"
_chem_comp.type                                 NON-POLYMER
_chem_comp.pdbx_type                            HETAIN
_chem_comp.formula                              "C15 H16 O5"
_chem_comp.mon_nstd_parent_comp_id              ?
_chem_comp.pdbx_synonyms                        ?
_chem_comp.pdbx_formal_charge                   0
_chem_comp.pdbx_initial_date                    2019-01-31
_chem_comp.pdbx_modified_date                   2020-01-31
_chem_comp.pdbx_ambiguous_flag                  N
_chem_comp.pdbx_release_status                  REL
_chem_comp.pdbx_replaced_by                     ?
_chem_comp.pdbx_replaces                        ?
_chem_comp.formula_weight                       276.285
_chem_comp.one_letter_code                      ?
_chem_comp.three_letter_code                    L1Y
_chem_comp.pdbx_model_coordinates_details       ?
_chem_comp.pdbx_model_coordinates_missing_flag  N
_chem_comp.pdbx_ideal_coordinates_details       Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag  N
_chem_comp.pdbx_model_coordinates_db_code       6NU6
_chem_comp.pdbx_subcomponent_list               ?
_chem_comp.pdbx_processing_site                 RCSB
#   #
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
L1Y  C10  C1   C  0  1  N  N  S  54.413  140.837  21.399  -1.304   0.523   0.563  C10  L1Y   1  
L1Y  C12  C2   C  0  1  N  N  N  53.291  141.806  22.205  -1.443   1.809   1.402  C12  L1Y   2  
L1Y  C14  C3   C  0  1  N  N  N  55.507  142.559  22.586  -3.633   1.343   0.484  C14  L1Y   3  
L1Y  O17  O1   O  0  1  N  N  N  57.681  138.809  20.152  -4.983  -0.695  -0.995  O17  L1Y   4  
L1Y  C01  C4   C  0  1  Y  N  N  52.203  135.984  22.704   2.857  -0.470   1.051  C01  L1Y   5  
L1Y  C02  C5   C  0  1  Y  N  N  52.065  136.279  24.205   3.776  -0.271   0.019  C02  L1Y   6  
L1Y  C03  C6   C  0  1  Y  N  N  52.583  137.647  24.773   3.352   0.260  -1.201  C03  L1Y   7  
L1Y  C04  C7   C  0  1  Y  N  N  53.214  138.716  23.846   2.026   0.587  -1.387  C04  L1Y   8  
L1Y  C05  C8   C  0  1  Y  N  N  53.336  138.400  22.339   1.106   0.388  -0.354  C05  L1Y   9  
L1Y  C06  C9   C  0  1  Y  N  N  52.836  137.030  21.775   1.531  -0.149   0.865  C06  L1Y  10  
L1Y  C07  C10  C  0  1  N  N  N  53.944  139.366  21.275  -0.312   0.738  -0.552  C07  L1Y  11  
L1Y  C08  C11  C  0  1  N  N  N  56.734  140.864  21.054  -3.192  -1.135   0.471  C08  L1Y  12  
L1Y  C09  C12  C  0  1  N  N  N  57.113  139.394  21.107  -4.498  -1.468  -0.203  C09  L1Y  13  
L1Y  C11  C13  C  0  1  N  N  R  55.567  141.005  22.054  -2.696   0.226  -0.021  C11  L1Y  14  
L1Y  C13  C14  C  0  1  N  N  N  53.990  142.988  22.413  -2.680   2.522   0.803  C13  L1Y  15  
L1Y  C18  C15  C  0  1  N  N  N  51.464  135.188  25.122   5.199  -0.621   0.218  C18  L1Y  16  
L1Y  O15  O2   O  0  1  N  N  N  56.820  138.767  22.158  -5.123  -2.622   0.077  O15  L1Y  17  
L1Y  O16  O3   O  0  1  N  N  N  54.028  138.880  20.217  -0.681   1.198  -1.610  O16  L1Y  18  
L1Y  O19  O4   O  0  1  N  N  N  50.917  135.502  26.224   6.086  -0.429  -0.778  O19  L1Y  19  
L1Y  O20  O5   O  0  1  N  N  N  51.577  133.974  24.795   5.569  -1.082   1.279  O20  L1Y  20  
L1Y  H1   H1   H  0  1  N  N  N  54.489  141.246  20.381  -0.981  -0.303   1.196  H1   L1Y  21  
L1Y  H2   H2   H  0  1  N  N  N  52.399  141.978  21.584  -1.614   1.565   2.450  H2   L1Y  22  
L1Y  H3   H3   H  0  1  N  N  N  52.990  141.351  23.160  -0.555   2.432   1.295  H3   L1Y  23  
L1Y  H4   H4   H  0  1  N  N  N  55.809  142.619  23.642  -4.343   1.626  -0.293  H4   L1Y  24  
L1Y  H5   H5   H  0  1  N  N  N  56.163  143.202  21.980  -4.160   1.022   1.383  H5   L1Y  25  
L1Y  H6   H6   H  0  1  N  N  N  51.856  135.043  22.303   3.186  -0.880   1.995  H6   L1Y  26  
L1Y  H7   H7   H  0  1  N  N  N  52.498  137.847  25.831   4.063   0.414  -1.999  H7   L1Y  27  
L1Y  H8   H8   H  0  1  N  N  N  53.560  139.659  24.244   1.699   0.998  -2.330  H8   L1Y  28  
L1Y  H9   H9   H  0  1  N  N  N  52.937  136.817  20.721   0.820  -0.303   1.664  H9   L1Y  29  
L1Y  H10  H10  H  0  1  N  N  N  57.583  141.494  21.357  -3.338  -1.100   1.550  H10  L1Y  30  
L1Y  H11  H11  H  0  1  N  N  N  56.412  141.145  20.040  -2.453  -1.900   0.229  H11  L1Y  31  
L1Y  H12  H12  H  0  1  N  N  N  55.702  140.329  22.911  -2.655   0.237  -1.110  H12  L1Y  32  
L1Y  H13  H13  H  0  1  N  N  N  53.876  143.659  21.549  -3.130   3.195   1.533  H13  L1Y  33  
L1Y  H14  H14  H  0  1  N  N  N  53.628  143.494  23.320  -2.414   3.060  -0.107  H14  L1Y  34  
L1Y  H15  H15  H  0  1  N  N  N  57.093  137.861  22.074  -5.958  -2.792  -0.380  H15  L1Y  35  
L1Y  H16  H16  H  0  1  N  N  N  50.650  134.713  26.681   7.004  -0.673  -0.601  H16  L1Y  36  
#   #
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
L1Y  O17  C09  DOUB  N  N   1  
L1Y  O16  C07  DOUB  N  N   2  
L1Y  C08  C09  SING  N  N   3  
L1Y  C08  C11  SING  N  N   4  
L1Y  C09  O15  SING  N  N   5  
L1Y  C07  C10  SING  N  N   6  
L1Y  C07  C05  SING  N  N   7  
L1Y  C10  C11  SING  N  N   8  
L1Y  C10  C12  SING  N  N   9  
L1Y  C06  C05  DOUB  Y  N  10  
L1Y  C06  C01  SING  Y  N  11  
L1Y  C11  C14  SING  N  N  12  
L1Y  C12  C13  SING  N  N  13  
L1Y  C05  C04  SING  Y  N  14  
L1Y  C13  C14  SING  N  N  15  
L1Y  C01  C02  DOUB  Y  N  16  
L1Y  C04  C03  DOUB  Y  N  17  
L1Y  C02  C03  SING  Y  N  18  
L1Y  C02  C18  SING  N  N  19  
L1Y  O20  C18  DOUB  N  N  20  
L1Y  C18  O19  SING  N  N  21  
L1Y  C10  H1   SING  N  N  22  
L1Y  C12  H2   SING  N  N  23  
L1Y  C12  H3   SING  N  N  24  
L1Y  C14  H4   SING  N  N  25  
L1Y  C14  H5   SING  N  N  26  
L1Y  C01  H6   SING  N  N  27  
L1Y  C03  H7   SING  N  N  28  
L1Y  C04  H8   SING  N  N  29  
L1Y  C06  H9   SING  N  N  30  
L1Y  C08  H10  SING  N  N  31  
L1Y  C08  H11  SING  N  N  32  
L1Y  C11  H12  SING  N  N  33  
L1Y  C13  H13  SING  N  N  34  
L1Y  C13  H14  SING  N  N  35  
L1Y  O15  H15  SING  N  N  36  
L1Y  O19  H16  SING  N  N  37  
#   #
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
L1Y  SMILES            ACDLabs               12.01  "C1(C(CCC1)CC(=O)O)C(c2ccc(cc2)C(O)=O)=O"  
L1Y  InChI             InChI                 1.03   "InChI=1S/C15H16O5/c16-13(17)8-11-2-1-3-12(11)14(18)9-4-6-10(7-5-9)15(19)20/h4-7,11-12H,1-3,8H2,(H,16,17)(H,19,20)/t11-,12+/m1/s1"  
L1Y  InChIKey          InChI                 1.03   AIBKYDBZFDNIIN-NEPJUHHUSA-N  
L1Y  SMILES_CANONICAL  CACTVS                3.385  "OC(=O)C[C@H]1CCC[C@@H]1C(=O)c2ccc(cc2)C(O)=O"  
L1Y  SMILES            CACTVS                3.385  "OC(=O)C[CH]1CCC[CH]1C(=O)c2ccc(cc2)C(O)=O"  
L1Y  SMILES_CANONICAL  "OpenEye OEToolkits"  2.0.7  "c1cc(ccc1C(=O)[C@H]2CCC[C@@H]2CC(=O)O)C(=O)O"  
L1Y  SMILES            "OpenEye OEToolkits"  2.0.7  "c1cc(ccc1C(=O)C2CCCC2CC(=O)O)C(=O)O"  
#   #
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
L1Y  "SYSTEMATIC NAME"  ACDLabs               12.01  "4-[(1S,2R)-2-(carboxymethyl)cyclopentane-1-carbonyl]benzoic acid"  
L1Y  "SYSTEMATIC NAME"  "OpenEye OEToolkits"  2.0.7  "4-[(1~{S},2~{R})-2-(2-hydroxy-2-oxoethyl)cyclopentyl]carbonylbenzoic acid"  
#   #
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
L1Y  "Create component"  2019-01-31  RCSB  
L1Y  "Initial release"   2020-02-05  RCSB  
##
