data_L0Y
# 
_chem_comp.id                                    L0Y 
_chem_comp.name                                  "6-[[[2-(cyclohexylmethylcarbamoyl)phenyl]methyl-methyl-amino]methyl]-2,3-dihydro-1,4-benzodioxine-5-carboxylic acid" 
_chem_comp.type                                  non-polymer 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C26 H32 N2 O5" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2013-12-23 
_chem_comp.pdbx_modified_date                    2014-04-28 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        452.543 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     L0Y 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        4CJS 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  EBI 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
L0Y C1   C1   C 0 1 Y N N 10.567 -48.082 17.987 2.701  -4.193 -1.732 C1   L0Y 1  
L0Y C2   C2   C 0 1 Y N N 11.476 -48.890 17.341 1.735  -5.087 -1.305 C2   L0Y 2  
L0Y C3   C3   C 0 1 Y N N 9.559  -47.466 17.276 2.741  -2.915 -1.212 C3   L0Y 3  
L0Y C4   C4   C 0 1 Y N N 11.379 -49.080 15.979 0.803  -4.707 -0.356 C4   L0Y 4  
L0Y C5   C5   C 0 1 Y N N 11.467 -45.510 10.689 -4.385 -1.078 0.637  C5   L0Y 5  
L0Y C6   C6   C 0 1 Y N N 12.232 -44.947 9.691  -5.273 -0.222 0.008  C6   L0Y 6  
L0Y C7   C7   C 0 1 Y N N 9.470  -47.661 15.914 1.804  -2.526 -0.254 C7   L0Y 7  
L0Y C8   C8   C 0 1 Y N N 13.393 -45.717 12.117 -2.663 0.590  0.485  C8   L0Y 8  
L0Y C9   C9   C 0 1 Y N N 10.379 -48.466 15.256 0.832  -3.432 0.172  C9   L0Y 9  
L0Y C10  C10  C 0 1 Y N N 12.034 -45.892 11.887 -3.088 -0.683 0.877  C10  L0Y 10 
L0Y C11  C11  C 0 1 Y N N 13.580 -44.774 9.910  -4.866 1.043  -0.389 C11  L0Y 11 
L0Y C12  C12  C 0 1 Y N N 14.161 -45.147 11.111 -3.561 1.457  -0.151 C12  L0Y 12 
L0Y C13  C13  C 0 1 N N N 8.391  -46.989 15.171 1.840  -1.158 0.308  C13  L0Y 13 
L0Y C14  C14  C 0 1 N N N 14.008 -46.111 13.420 -1.276 1.019  0.740  C14  L0Y 14 
L0Y C15  C15  C 0 1 N N N 8.824  -41.959 12.181 6.416  3.442  0.074  C15  L0Y 15 
L0Y C16  C16  C 0 1 N N N 7.731  -41.541 13.144 5.085  4.081  -0.329 C16  L0Y 16 
L0Y C17  C17  C 0 1 N N N 8.567  -43.369 11.691 6.453  1.992  -0.413 C17  L0Y 17 
L0Y C18  C18  C 0 1 N N N 7.663  -42.507 14.310 3.932  3.300  0.304  C18  L0Y 18 
L0Y C19  C19  C 0 1 N N N 8.461  -44.340 12.853 5.300  1.212  0.221  C19  L0Y 19 
L0Y C20  C20  C 0 1 N N N 15.647 -44.540 8.985  -5.420 3.255  -1.062 C20  L0Y 20 
L0Y C21  C21  C 0 1 N N N 16.099 -44.126 10.355 -3.951 3.382  -1.487 C21  L0Y 21 
L0Y C22  C22  C 0 1 N N N 7.382  -43.911 13.828 3.970  1.850  -0.183 C22  L0Y 22 
L0Y C23  C23  C 0 1 N N N 11.500 -48.687 11.700 -2.019 -3.069 -0.374 C23  L0Y 23 
L0Y C24  C24  C 0 1 N N N 10.297 -48.695 13.785 -0.185 -3.020 1.206  C24  L0Y 24 
L0Y C25  C25  C 0 1 N N N 11.123 -46.504 12.905 -2.128 -1.620 1.563  C25  L0Y 25 
L0Y C26  C26  C 0 1 N N N 7.190  -44.862 14.999 2.816  1.070  0.451  C26  L0Y 26 
L0Y N27  N27  N 0 1 N N N 8.359  -45.629 15.355 2.780  -0.285 -0.106 N27  L0Y 27 
L0Y N28  N28  N 0 1 N N N 11.335 -47.984 12.998 -1.249 -2.239 0.561  N28  L0Y 28 
L0Y O29  O29  O 0 1 N N N 14.849 -45.295 13.918 -0.937 1.525  1.942  O29  L0Y 29 
L0Y O30  O30  O 0 1 N N N 7.632  -47.624 14.451 1.023  -0.822 1.142  O30  L0Y 30 
L0Y O31  O31  O 0 1 N N N 13.623 -47.171 13.989 -0.438 0.915  -0.133 O31  L0Y 31 
L0Y O32  O32  O 0 1 N N N 14.280 -44.208 8.865  -5.754 1.864  -1.014 O32  L0Y 32 
L0Y O33  O33  O 0 1 N N N 15.524 -44.991 11.336 -3.145 2.695  -0.525 O33  L0Y 33 
L0Y H1   H1   H 0 1 N N N 10.644 -47.930 19.054 3.429  -4.497 -2.470 H1   L0Y 34 
L0Y H2   H2   H 0 1 N N N 12.263 -49.374 17.900 1.709  -6.086 -1.714 H2   L0Y 35 
L0Y H3   H3   H 0 1 N N N 8.844  -46.835 17.783 3.495  -2.218 -1.546 H3   L0Y 36 
L0Y H4   H4   H 0 1 N N N 12.092 -49.715 15.475 0.052  -5.409 -0.027 H4   L0Y 37 
L0Y H5   H5   H 0 1 N N N 10.408 -45.654 10.531 -4.713 -2.060 0.946  H5   L0Y 38 
L0Y H6   H6   H 0 1 N N N 11.783 -44.647 8.756  -6.288 -0.541 -0.176 H6   L0Y 39 
L0Y H241 H241 H 0 0 N N N 10.401 -49.774 13.598 -0.615 -3.909 1.667  H241 L0Y 40 
L0Y H242 H242 H 0 0 N N N 9.310  -48.357 13.438 0.300  -2.412 1.970  H242 L0Y 41 
L0Y H251 H251 H 0 0 N N N 11.324 -46.050 13.886 -1.526 -1.064 2.280  H251 L0Y 42 
L0Y H252 H252 H 0 0 N N N 10.080 -46.308 12.617 -2.688 -2.397 2.083  H252 L0Y 43 
L0Y H27  H27  H 0 1 N N N 9.156  -45.164 15.741 3.432  -0.554 -0.771 H27  L0Y 44 
L0Y H29  H29  H 0 1 N N N 15.131 -45.610 14.769 -0.015 1.792  2.062  H29  L0Y 45 
L0Y H151 H151 H 0 0 N N N 8.837  -41.271 11.323 7.237  3.998  -0.377 H151 L0Y 46 
L0Y H152 H152 H 0 0 N N N 9.796  -41.923 12.694 6.515  3.464  1.159  H152 L0Y 47 
L0Y H161 H161 H 0 0 N N N 7.946  -40.530 13.521 5.058  5.114  0.017  H161 L0Y 48 
L0Y H162 H162 H 0 0 N N N 6.765  -41.538 12.618 4.986  4.059  -1.415 H162 L0Y 49 
L0Y H171 H171 H 0 0 N N N 7.626  -43.386 11.122 6.354  1.970  -1.498 H171 L0Y 50 
L0Y H172 H172 H 0 0 N N N 9.396  -43.679 11.038 7.401  1.537  -0.126 H172 L0Y 51 
L0Y H181 H181 H 0 0 N N N 8.624  -42.495 14.845 4.031  3.322  1.389  H181 L0Y 52 
L0Y H182 H182 H 0 0 N N N 6.860  -42.192 14.992 2.984  3.756  0.017  H182 L0Y 53 
L0Y H191 H191 H 0 0 N N N 8.217  -45.340 12.464 5.327  0.178  -0.126 H191 L0Y 54 
L0Y H192 H192 H 0 0 N N N 9.426  -44.377 13.379 5.399  1.233  1.306  H192 L0Y 55 
L0Y H22  H22  H 0 1 N N N 6.433  -43.883 13.273 3.870  1.829  -1.268 H22  L0Y 56 
L0Y H201 H201 H 0 0 N N N 16.231 -44.006 8.221  -5.557 3.700  -0.077 H201 L0Y 57 
L0Y H202 H202 H 0 0 N N N 15.782 -45.624 8.858  -6.057 3.762  -1.787 H202 L0Y 58 
L0Y H211 H211 H 0 0 N N N 17.196 -44.187 10.412 -3.812 2.933  -2.470 H211 L0Y 59 
L0Y H212 H212 H 0 0 N N N 15.779 -43.091 10.548 -3.668 4.435  -1.520 H212 L0Y 60 
L0Y H261 H261 H 0 0 N N N 6.890  -44.269 15.876 2.963  1.016  1.529  H261 L0Y 61 
L0Y H262 H262 H 0 0 N N N 6.385  -45.566 14.740 1.875  1.576  0.237  H262 L0Y 62 
L0Y H231 H231 H 0 0 N N N 12.267 -48.175 11.100 -2.498 -3.882 0.171  H231 L0Y 63 
L0Y H232 H232 H 0 0 N N N 11.811 -49.726 11.883 -2.781 -2.459 -0.859 H232 L0Y 64 
L0Y H233 H233 H 0 0 N N N 10.544 -48.681 11.156 -1.349 -3.482 -1.129 H233 L0Y 65 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
L0Y C1  C2   SING Y N 1  
L0Y C1  C3   DOUB Y N 2  
L0Y C2  C4   DOUB Y N 3  
L0Y C3  C7   SING Y N 4  
L0Y C4  C9   SING Y N 5  
L0Y C5  C6   SING Y N 6  
L0Y C5  C10  DOUB Y N 7  
L0Y C6  C11  DOUB Y N 8  
L0Y C7  C9   DOUB Y N 9  
L0Y C7  C13  SING N N 10 
L0Y C8  C10  SING Y N 11 
L0Y C8  C12  DOUB Y N 12 
L0Y C8  C14  SING N N 13 
L0Y C9  C24  SING N N 14 
L0Y C10 C25  SING N N 15 
L0Y C11 C12  SING Y N 16 
L0Y C11 O32  SING N N 17 
L0Y C12 O33  SING N N 18 
L0Y C13 N27  SING N N 19 
L0Y C13 O30  DOUB N N 20 
L0Y C14 O29  SING N N 21 
L0Y C14 O31  DOUB N N 22 
L0Y C15 C16  SING N N 23 
L0Y C15 C17  SING N N 24 
L0Y C16 C18  SING N N 25 
L0Y C17 C19  SING N N 26 
L0Y C18 C22  SING N N 27 
L0Y C19 C22  SING N N 28 
L0Y C20 C21  SING N N 29 
L0Y C20 O32  SING N N 30 
L0Y C21 O33  SING N N 31 
L0Y C22 C26  SING N N 32 
L0Y C23 N28  SING N N 33 
L0Y C24 N28  SING N N 34 
L0Y C25 N28  SING N N 35 
L0Y C26 N27  SING N N 36 
L0Y C1  H1   SING N N 37 
L0Y C2  H2   SING N N 38 
L0Y C3  H3   SING N N 39 
L0Y C4  H4   SING N N 40 
L0Y C5  H5   SING N N 41 
L0Y C6  H6   SING N N 42 
L0Y C24 H241 SING N N 43 
L0Y C24 H242 SING N N 44 
L0Y C25 H251 SING N N 45 
L0Y C25 H252 SING N N 46 
L0Y N27 H27  SING N N 47 
L0Y O29 H29  SING N N 48 
L0Y C15 H151 SING N N 49 
L0Y C15 H152 SING N N 50 
L0Y C16 H161 SING N N 51 
L0Y C16 H162 SING N N 52 
L0Y C17 H171 SING N N 53 
L0Y C17 H172 SING N N 54 
L0Y C18 H181 SING N N 55 
L0Y C18 H182 SING N N 56 
L0Y C19 H191 SING N N 57 
L0Y C19 H192 SING N N 58 
L0Y C22 H22  SING N N 59 
L0Y C20 H201 SING N N 60 
L0Y C20 H202 SING N N 61 
L0Y C21 H211 SING N N 62 
L0Y C21 H212 SING N N 63 
L0Y C26 H261 SING N N 64 
L0Y C26 H262 SING N N 65 
L0Y C23 H231 SING N N 66 
L0Y C23 H232 SING N N 67 
L0Y C23 H233 SING N N 68 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
L0Y SMILES           ACDLabs              12.01 "O=C(NCC1CCCCC1)c2ccccc2CN(C)Cc4ccc3OCCOc3c4C(=O)O"                                                                                                                              
L0Y InChI            InChI                1.03  "InChI=1S/C26H32N2O5/c1-28(17-20-11-12-22-24(23(20)26(30)31)33-14-13-32-22)16-19-9-5-6-10-21(19)25(29)27-15-1-7-3-2-4-8-18/h5-6,9-12,18H,2-4,7-8,13-17H2,1H3,(H,27,29)(H,30,31)" 
L0Y InChIKey         InChI                1.03  XSHGFHPQUOIBPT-UHFFFAOYSA-N                                                                                                                                                      
L0Y SMILES_CANONICAL CACTVS               3.385 "CN(Cc1ccccc1C(=O)NCC2CCCCC2)Cc3ccc4OCCOc4c3C(O)=O"                                                                                                                              
L0Y SMILES           CACTVS               3.385 "CN(Cc1ccccc1C(=O)NCC2CCCCC2)Cc3ccc4OCCOc4c3C(O)=O"                                                                                                                              
L0Y SMILES_CANONICAL "OpenEye OEToolkits" 1.7.6 "CN(Cc1ccccc1C(=O)NCC2CCCCC2)Cc3ccc4c(c3C(=O)O)OCCO4"                                                                                                                            
L0Y SMILES           "OpenEye OEToolkits" 1.7.6 "CN(Cc1ccccc1C(=O)NCC2CCCCC2)Cc3ccc4c(c3C(=O)O)OCCO4"                                                                                                                            
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
L0Y "SYSTEMATIC NAME" ACDLabs              12.01 "6-{[{2-[(cyclohexylmethyl)carbamoyl]benzyl}(methyl)amino]methyl}-2,3-dihydro-1,4-benzodioxine-5-carboxylic acid"     
L0Y "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.7.6 "6-[[[2-(cyclohexylmethylcarbamoyl)phenyl]methyl-methyl-amino]methyl]-2,3-dihydro-1,4-benzodioxine-5-carboxylic acid" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
L0Y "Create component"   2013-12-23 EBI  
L0Y "Initial release"    2014-01-08 RCSB 
L0Y "Other modification" 2014-04-28 EBI  
# 
