data_I6Y
# 
_chem_comp.id                                    I6Y 
_chem_comp.name                                  "1-(2-piperazin-1-ylethyl)-5-pyridin-4-yl-indole" 
_chem_comp.type                                  non-polymer 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C19 H22 N4" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2022-02-16 
_chem_comp.pdbx_modified_date                    2023-02-24 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        306.405 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     I6Y 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        7YXF 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  PDBE 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
I6Y C1  C1  C 0 1 Y N N 13.272 5.808 63.755 5.754  -2.298 0.002  C1  I6Y 1  
I6Y C2  C2  C 0 1 Y N N 14.642 5.949 63.772 4.454  -1.863 -0.146 C2  I6Y 2  
I6Y C3  C3  C 0 1 Y N N 15.397 5.103 64.555 4.166  -0.509 0.049  C3  I6Y 3  
I6Y C4  C4  C 0 1 Y N N 16.878 5.157 64.560 2.782  0.005  -0.099 C4  I6Y 4  
I6Y C5  C5  C 0 1 Y N N 17.563 5.951 63.615 1.743  -0.872 -0.430 C5  I6Y 5  
I6Y C6  C6  C 0 1 Y N N 18.945 5.976 63.557 0.465  -0.417 -0.570 C6  I6Y 6  
I6Y C8  C7  C 0 1 Y N N 18.985 4.347 65.394 1.213  1.824  -0.043 C8  I6Y 7  
I6Y C11 C8  C 0 1 N N N 22.053 5.660 63.867 -2.306 1.127  -0.775 C11 I6Y 8  
I6Y C12 C9  C 0 1 N N N 23.208 6.115 64.738 -2.955 0.579  0.497  C12 I6Y 9  
I6Y C13 C10 C 0 1 N N N 24.917 7.805 65.086 -4.169 -1.145 -0.693 C13 I6Y 10 
I6Y C14 C11 C 0 1 N N N 26.002 6.818 65.478 -5.570 -1.633 -1.070 C14 I6Y 11 
I6Y C15 C12 C 0 1 N N N 25.786 5.738 63.349 -6.432 -0.771 1.021  C15 I6Y 12 
I6Y C16 C13 C 0 1 N N N 24.718 6.737 62.947 -5.031 -0.283 1.397  C16 I6Y 13 
I6Y C10 C14 C 0 1 Y N N 21.204 4.084 65.665 -0.719 2.984  -0.177 C10 I6Y 14 
I6Y C17 C15 C 0 1 Y N N 17.592 4.339 65.430 2.518  1.353  0.099  C17 I6Y 15 
I6Y C18 C16 C 0 1 Y N N 14.731 4.125 65.263 5.217  0.348  0.385  C18 I6Y 16 
I6Y C19 C17 C 0 1 Y N N 13.355 4.045 65.188 6.489  -0.171 0.513  C19 I6Y 17 
I6Y C7  C18 C 0 1 Y N N 19.644 5.168 64.452 0.178  0.933  -0.383 C7  I6Y 18 
I6Y C9  C19 C 0 1 Y N N 20.002 3.676 66.142 0.587  3.142  0.087  C9  I6Y 19 
I6Y N1  N1  N 0 1 Y N N 20.998 4.986 64.627 -0.983 1.670  -0.453 N1  I6Y 20 
I6Y N2  N2  N 0 1 N N N 23.974 7.206 64.126 -4.281 0.035  0.175  N2  I6Y 21 
I6Y N3  N3  N 0 1 N N N 26.726 6.357 64.289 -6.320 -1.951 0.152  N3  I6Y 22 
I6Y N4  N4  N 0 1 Y N N 12.623 4.868 64.443 6.718  -1.456 0.321  N4  I6Y 23 
I6Y H1  H1  H 0 1 N N N 12.694 6.494 63.154 5.986  -3.343 -0.142 H1  I6Y 24 
I6Y H2  H2  H 0 1 N N N 15.119 6.714 63.178 3.670  -2.558 -0.407 H2  I6Y 25 
I6Y H3  H3  H 0 1 N N N 16.995 6.553 62.921 1.956  -1.921 -0.578 H3  I6Y 26 
I6Y H4  H4  H 0 1 N N N 19.464 6.599 62.844 -0.327 -1.105 -0.827 H4  I6Y 27 
I6Y H5  H5  H 0 1 N N N 22.439 4.963 63.108 -2.201 0.324  -1.505 H5  I6Y 28 
I6Y H6  H6  H 0 1 N N N 21.620 6.541 63.370 -2.931 1.917  -1.191 H6  I6Y 29 
I6Y H7  H7  H 0 1 N N N 22.808 6.462 65.702 -2.330 -0.211 0.913  H7  I6Y 30 
I6Y H8  H8  H 0 1 N N N 23.881 5.262 64.906 -3.060 1.382  1.227  H8  I6Y 31 
I6Y H9  H9  H 0 1 N N N 25.384 8.688 64.626 -3.639 -1.937 -0.164 H9  I6Y 32 
I6Y H10 H10 H 0 1 N N N 24.366 8.109 65.988 -3.620 -0.881 -1.598 H10 I6Y 33 
I6Y H11 H11 H 0 1 N N N 25.542 5.954 65.980 -6.091 -0.851 -1.623 H11 I6Y 34 
I6Y H12 H12 H 0 1 N N N 26.708 7.309 66.165 -5.490 -2.525 -1.691 H12 I6Y 35 
I6Y H13 H13 H 0 1 N N N 25.310 4.870 63.829 -6.981 -1.035 1.925  H13 I6Y 36 
I6Y H14 H14 H 0 1 N N N 26.332 5.408 62.453 -6.963 0.021  0.491  H14 I6Y 37 
I6Y H15 H15 H 0 1 N N N 25.195 7.598 62.455 -5.112 0.609  2.018  H15 I6Y 38 
I6Y H16 H16 H 0 1 N N N 24.019 6.256 62.247 -4.511 -1.065 1.950  H16 I6Y 39 
I6Y H17 H17 H 0 1 N N N 22.167 3.760 66.032 -1.454 3.774  -0.164 H17 I6Y 40 
I6Y H18 H18 H 0 1 N N N 17.070 3.702 66.129 3.317  2.032  0.359  H18 I6Y 41 
I6Y H19 H19 H 0 1 N N N 15.283 3.425 65.873 5.037  1.401  0.544  H19 I6Y 42 
I6Y H20 H20 H 0 1 N N N 12.851 3.280 65.760 7.308  0.484  0.772  H20 I6Y 43 
I6Y H21 H21 H 0 1 N N N 19.842 2.970 66.944 1.084  4.067  0.340  H21 I6Y 44 
I6Y H23 H23 H 0 1 N N N 27.416 5.686 64.559 -5.898 -2.724 0.645  H23 I6Y 45 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
I6Y C16 C15 SING N N 1  
I6Y C16 N2  SING N N 2  
I6Y C15 N3  SING N N 3  
I6Y C6  C5  DOUB Y N 4  
I6Y C6  C7  SING Y N 5  
I6Y C5  C4  SING Y N 6  
I6Y C1  C2  DOUB Y N 7  
I6Y C1  N4  SING Y N 8  
I6Y C2  C3  SING Y N 9  
I6Y C11 N1  SING N N 10 
I6Y C11 C12 SING N N 11 
I6Y N2  C12 SING N N 12 
I6Y N2  C13 SING N N 13 
I6Y N3  C14 SING N N 14 
I6Y N4  C19 DOUB Y N 15 
I6Y C7  N1  SING Y N 16 
I6Y C7  C8  DOUB Y N 17 
I6Y C3  C4  SING N N 18 
I6Y C3  C18 DOUB Y N 19 
I6Y C4  C17 DOUB Y N 20 
I6Y N1  C10 SING Y N 21 
I6Y C13 C14 SING N N 22 
I6Y C19 C18 SING Y N 23 
I6Y C8  C17 SING Y N 24 
I6Y C8  C9  SING Y N 25 
I6Y C10 C9  DOUB Y N 26 
I6Y C1  H1  SING N N 27 
I6Y C2  H2  SING N N 28 
I6Y C5  H3  SING N N 29 
I6Y C6  H4  SING N N 30 
I6Y C11 H5  SING N N 31 
I6Y C11 H6  SING N N 32 
I6Y C12 H7  SING N N 33 
I6Y C12 H8  SING N N 34 
I6Y C13 H9  SING N N 35 
I6Y C13 H10 SING N N 36 
I6Y C14 H11 SING N N 37 
I6Y C14 H12 SING N N 38 
I6Y C15 H13 SING N N 39 
I6Y C15 H14 SING N N 40 
I6Y C16 H15 SING N N 41 
I6Y C16 H16 SING N N 42 
I6Y C10 H17 SING N N 43 
I6Y C17 H18 SING N N 44 
I6Y C18 H19 SING N N 45 
I6Y C19 H20 SING N N 46 
I6Y C9  H21 SING N N 47 
I6Y N3  H23 SING N N 48 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
I6Y InChI            InChI                1.06  "InChI=1S/C19H22N4/c1-2-19-18(15-17(1)16-3-6-20-7-4-16)5-10-23(19)14-13-22-11-8-21-9-12-22/h1-7,10,15,21H,8-9,11-14H2" 
I6Y InChIKey         InChI                1.06  VBMJJJLARMSVGX-UHFFFAOYSA-N                                                                                            
I6Y SMILES_CANONICAL CACTVS               3.385 "C1CN(CCN1)CCn2ccc3cc(ccc23)c4ccncc4"                                                                                  
I6Y SMILES           CACTVS               3.385 "C1CN(CCN1)CCn2ccc3cc(ccc23)c4ccncc4"                                                                                  
I6Y SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "c1cc2c(ccn2CCN3CCNCC3)cc1c4ccncc4"                                                                                    
I6Y SMILES           "OpenEye OEToolkits" 2.0.7 "c1cc2c(ccn2CCN3CCNCC3)cc1c4ccncc4"                                                                                    
# 
_pdbx_chem_comp_identifier.comp_id           I6Y 
_pdbx_chem_comp_identifier.type              "SYSTEMATIC NAME" 
_pdbx_chem_comp_identifier.program           "OpenEye OEToolkits" 
_pdbx_chem_comp_identifier.program_version   2.0.7 
_pdbx_chem_comp_identifier.identifier        "1-(2-piperazin-1-ylethyl)-5-pyridin-4-yl-indole" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
I6Y "Create component"  2022-02-16 PDBE 
I6Y "Modify descriptor" 2022-08-22 RCSB 
I6Y "Initial release"   2023-03-01 RCSB 
# 
