data_G2Y
#

_chem_comp.id                                   G2Y
_chem_comp.name                                 "1,6-dichloro-1,6-dideoxy-alpha-L-sorbofuranosyl 4-chloro-4-deoxy-beta-D-galactopyranoside"
_chem_comp.type                                 NON-POLYMER
_chem_comp.pdbx_type                            HETAIN
_chem_comp.formula                              "C12 H19 Cl3 O8"
_chem_comp.mon_nstd_parent_comp_id              ?
_chem_comp.pdbx_synonyms                        ?
_chem_comp.pdbx_formal_charge                   0
_chem_comp.pdbx_initial_date                    2018-05-03
_chem_comp.pdbx_modified_date                   2020-04-16
_chem_comp.pdbx_ambiguous_flag                  N
_chem_comp.pdbx_release_status                  OBS
_chem_comp.pdbx_replaced_by                     ?
_chem_comp.pdbx_replaces                        ?
_chem_comp.formula_weight                       397.633
_chem_comp.one_letter_code                      ?
_chem_comp.three_letter_code                    G2Y
_chem_comp.pdbx_model_coordinates_details       ?
_chem_comp.pdbx_model_coordinates_missing_flag  N
_chem_comp.pdbx_ideal_coordinates_details       Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag  N
_chem_comp.pdbx_model_coordinates_db_code       6CJV
_chem_comp.pdbx_subcomponent_list               ?
_chem_comp.pdbx_processing_site                 RCSB
#   #
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
G2Y  C01   C1   C   0  1  N  N  R  -23.236   8.994   8.613  -3.397  -0.836  -0.435  C01   G2Y   1  
G2Y  C02   C2   C   0  1  N  N  R  -24.732   9.087   8.769  -2.323  -1.922  -0.314  C02   G2Y   2  
G2Y  C03   C3   C   0  1  N  N  R  -25.073   9.700  10.098  -1.255  -1.459   0.682  C03   G2Y   3  
G2Y  C04   C4   C   0  1  N  N  S  -24.546   8.733  11.155  -0.678  -0.121   0.214  C04   G2Y   4  
G2Y  C06   C5   C   0  1  N  N  R  -22.556   8.418   9.870  -2.737   0.478  -0.860  C06   G2Y   5  
G2Y  C10   C6   C   0  1  N  N  N  -21.079   8.605   9.829  -3.794   1.582  -0.925  C10   G2Y   6  
G2Y  C13   C7   C   0  1  N  N  R  -25.314   8.060  13.454   1.389   1.033   0.589  C13   G2Y   7  
G2Y  C14   C8   C   0  1  N  N  S  -23.654   6.315  13.140   3.696   0.516   1.181  C14   G2Y   8  
G2Y  C15   C9   C   0  1  N  N  S  -25.170   6.548  13.064   2.456   1.307   1.666  C15   G2Y   9  
G2Y  C17   C10  C   0  1  N  N  R  -23.052   7.497  13.522   3.063  -0.524   0.222  C17   G2Y  10  
G2Y  C18   C11  C   0  1  N  N  N  -26.679   8.731  13.332   0.922   2.353  -0.027  C18   G2Y  11  
G2Y  C21   C12  C   0  1  N  N  N  -22.017   7.416  14.614   4.089  -1.000  -0.808  C21   G2Y  12  
G2Y  O05   O1   O   0  1  N  N  N  -23.072   9.032  11.123  -1.733   0.835   0.093  O05   G2Y  13  
G2Y  O08   O2   O   0  1  N  N  N  -25.333   9.843   7.680  -2.919  -3.134   0.153  O08   G2Y  14  
G2Y  O09   O3   O   0  1  N  N  N  -26.476   9.986  10.270  -0.211  -2.433   0.749  O09   G2Y  15  
G2Y  O11   O4   O   0  1  N  N  N  -20.565   7.769  10.854  -3.189   2.795  -1.379  O11   G2Y  16  
G2Y  O12   O5   O   0  1  N  N  N  -25.125   8.988  12.346   0.279   0.344   1.168  O12   G2Y  17  
G2Y  O16   O6   O   0  1  N  N  N  -24.211   8.532  13.949   2.001   0.213  -0.421  O16   G2Y  18  
G2Y  O19   O7   O   0  1  N  N  N  -25.797   6.164  11.909   2.020   0.822   2.937  O19   G2Y  19  
G2Y  O20   O8   O   0  1  N  N  N  -23.478   5.189  14.104   4.603   1.370   0.481  O20   G2Y  20  
G2Y  CL1   CL1  CL  0  0  N  N  N  -22.514  10.660   8.266  -4.212  -0.614   1.158  CL1   G2Y  21  
G2Y  CL2   CL2  CL  0  0  N  N  N  -21.546   9.015  15.318   3.367  -2.313  -1.812  CL2   G2Y  22  
G2Y  CL3   CL3  CL  0  0  N  N  N  -27.180   8.426  15.005  -0.084   2.014  -1.485  CL3   G2Y  23  
G2Y  H011  H1   H   0  0  N  N  N  -22.989   8.367   7.743  -4.132  -1.133  -1.184  H011  G2Y  24  
G2Y  H021  H2   H   0  0  N  N  N  -25.138   8.065   8.752  -1.864  -2.092  -1.288  H021  G2Y  25  
G2Y  H031  H3   H   0  0  N  N  N  -24.507  10.639  10.193  -1.705  -1.339   1.668  H031  G2Y  26  
G2Y  H041  H4   H   0  0  N  N  N  -24.721   7.699  10.823  -0.193  -0.252  -0.753  H041  G2Y  27  
G2Y  H061  H5   H   0  0  N  N  N  -22.768   7.339   9.900  -2.279   0.354  -1.841  H061  G2Y  28  
G2Y  H102  H6   H   0  0  N  N  N  -20.680   8.303   8.850  -4.583   1.289  -1.617  H102  G2Y  29  
G2Y  H101  H7   H   0  0  N  N  N  -20.819   9.656  10.023  -4.219   1.737   0.066  H101  G2Y  30  
G2Y  H141  H8   H   0  0  N  N  N  -23.298   5.999  12.148   4.195   0.023   2.016  H141  G2Y  31  
G2Y  H151  H9   H   0  0  N  N  N  -25.609   5.980  13.898   2.680   2.372   1.720  H151  G2Y  32  
G2Y  H171  H10  H   0  0  N  N  N  -22.560   7.941  12.644   2.661  -1.368   0.783  H171  G2Y  33  
G2Y  H182  H11  H   0  0  N  N  N  -26.607   9.803  13.098   0.329   2.905   0.702  H182  G2Y  34  
G2Y  H181  H12  H   0  0  N  N  N  -27.331   8.238  12.596   1.789   2.948  -0.315  H181  G2Y  35  
G2Y  H211  H13  H   0  0  N  N  N  -22.419   6.789  15.423   4.373  -0.167  -1.450  H211  G2Y  36  
G2Y  H212  H14  H   0  0  N  N  N  -21.115   6.944  14.198   4.971  -1.380  -0.294  H212  G2Y  37  
G2Y  H081  H15  H   0  0  N  N  N  -26.274   9.885   7.805  -3.611  -3.481  -0.427  H081  G2Y  38  
G2Y  H091  H16  H   0  0  N  N  N  -26.619  10.370  11.127  -0.507  -3.308   1.034  H091  G2Y  39  
G2Y  H111  H17  H   0  0  N  N  N  -19.618   7.844  10.879  -3.802   3.540  -1.444  H111  G2Y  40  
G2Y  H191  H18  H   0  0  N  N  N  -26.725   6.354  11.974   2.676   0.915   3.641  H191  G2Y  41  
G2Y  H201  H19  H   0  0  N  N  N  -22.553   4.993  14.197   5.351   0.905   0.081  H201  G2Y  42  
#   #
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
G2Y  O08  C02   SING  N  N   1  
G2Y  CL1  C01   SING  N  N   2  
G2Y  C01  C02   SING  N  N   3  
G2Y  C01  C06   SING  N  N   4  
G2Y  C02  C03   SING  N  N   5  
G2Y  C10  C06   SING  N  N   6  
G2Y  C10  O11   SING  N  N   7  
G2Y  C06  O05   SING  N  N   8  
G2Y  C03  O09   SING  N  N   9  
G2Y  C03  C04   SING  N  N  10  
G2Y  O05  C04   SING  N  N  11  
G2Y  C04  O12   SING  N  N  12  
G2Y  O19  C15   SING  N  N  13  
G2Y  O12  C13   SING  N  N  14  
G2Y  C15  C14   SING  N  N  15  
G2Y  C15  C13   SING  N  N  16  
G2Y  C14  C17   SING  N  N  17  
G2Y  C14  O20   SING  N  N  18  
G2Y  C18  C13   SING  N  N  19  
G2Y  C18  CL3   SING  N  N  20  
G2Y  C13  O16   SING  N  N  21  
G2Y  C17  O16   SING  N  N  22  
G2Y  C17  C21   SING  N  N  23  
G2Y  C21  CL2   SING  N  N  24  
G2Y  C01  H011  SING  N  N  25  
G2Y  C02  H021  SING  N  N  26  
G2Y  C03  H031  SING  N  N  27  
G2Y  C04  H041  SING  N  N  28  
G2Y  C06  H061  SING  N  N  29  
G2Y  C10  H102  SING  N  N  30  
G2Y  C10  H101  SING  N  N  31  
G2Y  C14  H141  SING  N  N  32  
G2Y  C15  H151  SING  N  N  33  
G2Y  C17  H171  SING  N  N  34  
G2Y  C18  H182  SING  N  N  35  
G2Y  C18  H181  SING  N  N  36  
G2Y  C21  H211  SING  N  N  37  
G2Y  C21  H212  SING  N  N  38  
G2Y  O08  H081  SING  N  N  39  
G2Y  O09  H091  SING  N  N  40  
G2Y  O11  H111  SING  N  N  41  
G2Y  O19  H191  SING  N  N  42  
G2Y  O20  H201  SING  N  N  43  
#   #
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
G2Y  SMILES            ACDLabs               12.01  "C2(C(C(O)C(OC1(OC(C(O)C1O)CCl)CCl)OC2CO)O)Cl"  
G2Y  InChI             InChI                 1.03   "InChI=1S/C12H19Cl3O8/c13-1-4-7(17)10(20)12(3-14,22-4)23-11-9(19)8(18)6(15)5(2-16)21-11/h4-11,16-20H,1-3H2/t4-,5+,6-,7+,8-,9+,10-,11-,12-/m0/s1"  
G2Y  InChIKey          InChI                 1.03   BAQAVOSOZGMPRM-RGUBMTAVSA-N  
G2Y  SMILES_CANONICAL  CACTVS                3.385  "OC[C@H]1O[C@@H](O[C@]2(CCl)O[C@@H](CCl)[C@@H](O)[C@@H]2O)[C@H](O)[C@@H](O)[C@H]1Cl"  
G2Y  SMILES            CACTVS                3.385  "OC[CH]1O[CH](O[C]2(CCl)O[CH](CCl)[CH](O)[CH]2O)[CH](O)[CH](O)[CH]1Cl"  
G2Y  SMILES_CANONICAL  "OpenEye OEToolkits"  2.0.6  "C([C@@H]1[C@@H]([C@@H]([C@H]([C@@H](O1)O[C@]2([C@H]([C@@H]([C@@H](O2)CCl)O)O)CCl)O)O)Cl)O"  
G2Y  SMILES            "OpenEye OEToolkits"  2.0.6  "C(C1C(C(C(C(O1)OC2(C(C(C(O2)CCl)O)O)CCl)O)O)Cl)O"  
#   #
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
G2Y  "SYSTEMATIC NAME"  ACDLabs               12.01  "1,6-dichloro-1,6-dideoxy-alpha-L-sorbofuranosyl 4-chloro-4-deoxy-beta-D-galactopyranoside"  
G2Y  "SYSTEMATIC NAME"  "OpenEye OEToolkits"  2.0.6  "(2~{S},3~{R},4~{R},5~{R},6~{R})-2-[(2~{R},3~{S},4~{S},5~{R})-2,5-bis(chloromethyl)-3,4-bis(oxidanyl)oxolan-2-yl]oxy-5-chloranyl-6-(hydroxymethyl)oxane-3,4-diol"  
#   #
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
G2Y  "Create component"    2018-05-03  RCSB  
G2Y  "Initial release"     2018-08-08  RCSB  
G2Y  "Obsolete component"  2020-04-16  RCSB  
##
