data_E2Y
# 
_chem_comp.id                                    E2Y 
_chem_comp.name                                  "(R)-2-(2,2-dimethyl-4H-benzo[d][1,3]dioxin-6-yl)-2-hydroxyacetonitrile" 
_chem_comp.type                                  non-polymer 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C12 H13 N O3" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         "(R)-alpha-Hydroxy-2,2-dimethyl-4H-1,3-benzodioxin-6-acetonitrile" 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2023-06-09 
_chem_comp.pdbx_modified_date                    2024-05-31 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        219.237 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     E2Y 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        8JM8 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  PDBC 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.pdbx_backbone_atom_flag 
_chem_comp_atom.pdbx_n_terminal_atom_flag 
_chem_comp_atom.pdbx_c_terminal_atom_flag 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
E2Y N1  N1  N 0 1 N N N N N N 21.644 8.956  -16.399 4.477  1.090  -1.453 N1  E2Y 1  
E2Y C4  C1  C 0 1 Y N N N N N 22.350 12.702 -14.777 0.821  0.853  0.541  C4  E2Y 2  
E2Y C5  C2  C 0 1 Y N N N N N 22.591 12.361 -16.036 1.793  -0.100 0.300  C5  E2Y 3  
E2Y C6  C3  C 0 1 Y N N N N N 23.978 12.532 -16.656 1.448  -1.314 -0.263 C6  E2Y 4  
E2Y C7  C4  C 0 1 N N N N N N 25.245 14.817 -12.538 -3.139 -0.049 -0.088 C7  E2Y 5  
E2Y C8  C5  C 0 1 N N N N N N 23.257 13.831 -12.583 -1.552 1.636  0.499  C8  E2Y 6  
E2Y C10 C6  C 0 1 N N N N N N 26.227 14.751 -11.387 -4.475 -0.273 -0.799 C10 E2Y 7  
E2Y C1  C7  C 0 1 Y N N N N N 24.889 13.123 -15.948 0.131  -1.577 -0.587 C1  E2Y 8  
E2Y C11 C8  C 0 1 N N N N N N 25.240 16.248 -13.016 -3.286 -0.379 1.399  C11 E2Y 9  
E2Y C12 C9  C 0 1 N N N N N N 21.634 10.102 -16.505 3.934  0.696  -0.536 C12 E2Y 10 
E2Y C2  C10 C 0 1 Y N N N N N 24.633 13.561 -14.545 -0.846 -0.622 -0.347 C2  E2Y 11 
E2Y C3  C11 C 0 1 Y N N N N N 23.443 13.375 -13.956 -0.498 0.595  0.220  C3  E2Y 12 
E2Y C9  C12 C 0 1 N N R N N N 21.522 11.601 -16.700 3.230  0.185  0.652  C9  E2Y 13 
E2Y O1  O1  O 0 1 N N N N N N 25.718 14.188 -13.734 -2.139 -0.887 -0.675 O1  E2Y 14 
E2Y O2  O2  O 0 1 N N N N N N 24.037 14.678 -11.955 -2.737 1.318  -0.239 O2  E2Y 15 
E2Y O3  O3  O 0 1 N N N N N N 21.329 11.836 -18.015 3.859  -1.018 1.098  O3  E2Y 16 
E2Y H1  H1  H 0 1 N N N N N N 21.384 12.504 -14.336 1.092  1.800  0.985  H1  E2Y 17 
E2Y H2  H2  H 0 1 N N N N N N 24.192 12.172 -17.652 2.209  -2.058 -0.451 H2  E2Y 18 
E2Y H3  H3  H 0 1 N N N N N N 22.255 14.284 -12.559 -1.781 1.653  1.565  H3  E2Y 19 
E2Y H4  H4  H 0 1 N N N N N N 23.262 12.918 -11.969 -1.183 2.614  0.191  H4  E2Y 20 
E2Y H5  H5  H 0 1 N N N N N N 25.796 15.252 -10.508 -4.366 -0.044 -1.859 H5  E2Y 21 
E2Y H6  H6  H 0 1 N N N N N N 26.436 13.699 -11.143 -4.778 -1.314 -0.682 H6  E2Y 22 
E2Y H7  H7  H 0 1 N N N N N N 27.162 15.254 -11.674 -5.233 0.377  -0.362 H7  E2Y 23 
E2Y H8  H8  H 0 1 N N N N N N 25.860 13.303 -16.386 -0.137 -2.526 -1.028 H8  E2Y 24 
E2Y H9  H9  H 0 1 N N N N N N 24.893 16.905 -12.205 -4.040 0.271  1.842  H9  E2Y 25 
E2Y H10 H10 H 0 1 N N N N N N 26.259 16.539 -13.313 -3.592 -1.419 1.512  H10 E2Y 26 
E2Y H11 H11 H 0 1 N N N N N N 24.565 16.344 -13.879 -2.332 -0.224 1.902  H11 E2Y 27 
E2Y H12 H12 H 0 1 N N N N N N 20.594 11.887 -16.184 3.269  0.932  1.445  H12 E2Y 28 
E2Y H13 H13 H 0 1 N N N N N N 21.256 12.772 -18.163 3.862  -1.727 0.441  H13 E2Y 29 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
E2Y O3  C9  SING N N 1  
E2Y C9  C12 SING N N 2  
E2Y C9  C5  SING N N 3  
E2Y C6  C5  DOUB Y N 4  
E2Y C6  C1  SING Y N 5  
E2Y C12 N1  TRIP N N 6  
E2Y C5  C4  SING Y N 7  
E2Y C1  C2  DOUB Y N 8  
E2Y C4  C3  DOUB Y N 9  
E2Y C2  C3  SING Y N 10 
E2Y C2  O1  SING N N 11 
E2Y C3  C8  SING N N 12 
E2Y O1  C7  SING N N 13 
E2Y C11 C7  SING N N 14 
E2Y C8  O2  SING N N 15 
E2Y C7  O2  SING N N 16 
E2Y C7  C10 SING N N 17 
E2Y C4  H1  SING N N 18 
E2Y C6  H2  SING N N 19 
E2Y C8  H3  SING N N 20 
E2Y C8  H4  SING N N 21 
E2Y C10 H5  SING N N 22 
E2Y C10 H6  SING N N 23 
E2Y C10 H7  SING N N 24 
E2Y C1  H8  SING N N 25 
E2Y C11 H9  SING N N 26 
E2Y C11 H10 SING N N 27 
E2Y C11 H11 SING N N 28 
E2Y C9  H12 SING N N 29 
E2Y O3  H13 SING N N 30 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
E2Y InChI            InChI                1.06  "InChI=1S/C12H13NO3/c1-12(2)15-7-9-5-8(10(14)6-13)3-4-11(9)16-12/h3-5,10,14H,7H2,1-2H3/t10-/m0/s1" 
E2Y InChIKey         InChI                1.06  MMAANSPOXIONGY-JTQLQIEISA-N                                                                        
E2Y SMILES_CANONICAL CACTVS               3.385 "CC1(C)OCc2cc(ccc2O1)[C@@H](O)C#N"                                                                 
E2Y SMILES           CACTVS               3.385 "CC1(C)OCc2cc(ccc2O1)[CH](O)C#N"                                                                   
E2Y SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "CC1(OCc2cc(ccc2O1)[C@H](C#N)O)C"                                                                  
E2Y SMILES           "OpenEye OEToolkits" 2.0.7 "CC1(OCc2cc(ccc2O1)C(C#N)O)C"                                                                      
# 
_pdbx_chem_comp_identifier.comp_id           E2Y 
_pdbx_chem_comp_identifier.type              "SYSTEMATIC NAME" 
_pdbx_chem_comp_identifier.program           "OpenEye OEToolkits" 
_pdbx_chem_comp_identifier.program_version   2.0.7 
_pdbx_chem_comp_identifier.identifier        "(2~{R})-2-(2,2-dimethyl-4~{H}-1,3-benzodioxin-6-yl)-2-oxidanyl-ethanenitrile" 
# 
_pdbx_chem_comp_synonyms.ordinal      1 
_pdbx_chem_comp_synonyms.comp_id      E2Y 
_pdbx_chem_comp_synonyms.name         "(R)-alpha-Hydroxy-2,2-dimethyl-4H-1,3-benzodioxin-6-acetonitrile" 
_pdbx_chem_comp_synonyms.provenance   PUBCHEM 
_pdbx_chem_comp_synonyms.type         ? 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
E2Y "Create component" 2023-06-09 PDBC 
E2Y "Initial release"  2024-06-05 RCSB 
# 
