data_C4Y
# 
_chem_comp.id                                    C4Y 
_chem_comp.name                                  "1-(4-aminobenzyl)-3-{2-oxo-2-[(2R)-2-phenylpyrrolidin-1-yl]ethyl}urea" 
_chem_comp.type                                  NON-POLYMER 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C20 H24 N4 O2" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2015-07-02 
_chem_comp.pdbx_modified_date                    2016-07-15 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        352.430 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     C4Y 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        5CCS 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  EBI 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
C4Y N1  N1  N 0 1 N N N -20.360 17.545 4.771  -2.682 -0.725 0.196  N1  C4Y 1  
C4Y C2  C1  C 0 1 N N N -20.026 16.467 4.066  -1.506 -1.341 0.430  C2  C4Y 2  
C4Y C3  C2  C 0 1 N N N -21.687 17.775 5.292  -3.925 -1.299 0.715  C3  C4Y 3  
C4Y C4  C3  C 0 1 Y N N -21.690 17.958 6.761  -5.086 -0.421 0.324  C4  C4Y 4  
C4Y C5  C4  C 0 1 Y N N -20.982 17.053 7.563  -5.481 0.612  1.154  C5  C4Y 5  
C4Y C6  C5  C 0 1 Y N N -20.987 17.170 8.948  -6.544 1.419  0.798  C6  C4Y 6  
C4Y C7  C6  C 0 1 Y N N -21.710 18.215 9.523  -7.217 1.191  -0.396 C7  C4Y 7  
C4Y C8  C7  C 0 1 Y N N -22.441 19.125 8.721  -6.818 0.152  -1.227 C8  C4Y 8  
C4Y C9  C8  C 0 1 Y N N -22.428 19.005 7.330  -5.750 -0.647 -0.868 C9  C4Y 9  
C4Y N16 N2  N 0 1 N N N -21.704 18.320 10.992 -8.293 2.004  -0.759 N16 C4Y 10 
C4Y O17 O1  O 0 1 N N N -20.856 15.628 3.759  -1.478 -2.373 1.072  O17 C4Y 11 
C4Y N18 N3  N 0 1 N N N -18.714 16.335 3.790  -0.362 -0.812 -0.048 N18 C4Y 12 
C4Y C19 C9  C 0 1 N N N -18.134 15.182 3.152  0.916  -1.482 0.206  C19 C4Y 13 
C4Y C20 C10 C 0 1 N N N -17.790 14.081 4.144  2.032  -0.694 -0.431 C20 C4Y 14 
C4Y O23 O2  O 0 1 N N N -17.709 14.365 5.338  1.783  0.326  -1.037 O23 C4Y 15 
C4Y N25 N4  N 0 1 N N N -17.551 12.832 3.656  3.305  -1.123 -0.326 N25 C4Y 16 
C4Y C26 C11 C 0 1 N N R -17.750 12.425 2.235  4.484  -0.452 -0.891 C26 C4Y 17 
C4Y C27 C12 C 0 1 N N N -17.757 10.898 2.272  5.714  -1.316 -0.543 C27 C4Y 18 
C4Y C28 C13 C 0 1 N N N -16.779 10.551 3.388  5.095  -2.716 -0.289 C28 C4Y 19 
C4Y C29 C14 C 0 1 N N N -17.021 11.675 4.395  3.746  -2.340 0.379  C29 C4Y 20 
C4Y C42 C15 C 0 1 Y N N -16.615 12.821 1.353  4.633  0.920  -0.285 C42 C4Y 21 
C4Y C43 C16 C 0 1 Y N N -16.860 12.831 -0.046 4.379  1.112  1.061  C43 C4Y 22 
C4Y C44 C17 C 0 1 Y N N -15.822 13.147 -0.926 4.521  2.369  1.618  C44 C4Y 23 
C4Y C45 C18 C 0 1 Y N N -14.570 13.454 -0.410 4.917  3.434  0.831  C45 C4Y 24 
C4Y C46 C19 C 0 1 Y N N -14.308 13.414 0.976  5.172  3.241  -0.515 C46 C4Y 25 
C4Y C47 C20 C 0 1 Y N N -15.337 13.114 1.879  5.029  1.985  -1.072 C47 C4Y 26 
C4Y H1  H1  H 0 1 N N N -19.655 18.232 4.949  -2.704 0.101  -0.313 H1  C4Y 27 
C4Y H2  H2  H 0 1 N N N -22.100 18.680 4.822  -4.067 -2.296 0.299  H2  C4Y 28 
C4Y H3  H3  H 0 1 N N N -22.320 16.911 5.042  -3.870 -1.363 1.802  H3  C4Y 29 
C4Y H4  H4  H 0 1 N N N -20.424 16.253 7.098  -4.957 0.789  2.082  H4  C4Y 30 
C4Y H5  H5  H 0 1 N N N -20.444 16.469 9.564  -6.852 2.225  1.447  H5  C4Y 31 
C4Y H6  H6  H 0 1 N N N -23.011 19.915 9.187  -7.339 -0.028 -2.156 H6  C4Y 32 
C4Y H7  H7  H 0 1 N N N -22.972 19.701 6.709  -5.437 -1.452 -1.516 H7  C4Y 33 
C4Y H8  H8  H 0 1 N N N -21.135 17.593 11.376 -8.571 2.729  -0.177 H8  C4Y 34 
C4Y H9  H9  H 0 1 N N N -21.335 19.210 11.261 -8.762 1.844  -1.593 H9  C4Y 35 
C4Y H10 H10 H 0 1 N N N -18.104 17.086 4.044  -0.385 0.011  -0.561 H10 C4Y 36 
C4Y H11 H11 H 0 1 N N N -18.852 14.785 2.419  1.085  -1.547 1.281  H11 C4Y 37 
C4Y H12 H12 H 0 1 N N N -17.214 15.491 2.634  0.892  -2.485 -0.219 H12 C4Y 38 
C4Y H13 H13 H 0 1 N N N -18.705 12.806 1.845  4.382  -0.371 -1.974 H13 C4Y 39 
C4Y H14 H14 H 0 1 N N N -18.763 10.517 2.502  6.412  -1.349 -1.380 H14 C4Y 40 
C4Y H15 H15 H 0 1 N N N -17.418 10.482 1.312  6.206  -0.943 0.356  H15 C4Y 41 
C4Y H16 H16 H 0 1 N N N -17.007 9.568  3.826  4.935  -3.248 -1.226 H16 C4Y 42 
C4Y H17 H17 H 0 1 N N N -15.741 10.559 3.024  5.716  -3.300 0.390  H17 C4Y 43 
C4Y H18 H18 H 0 1 N N N -17.749 11.349 5.152  3.891  -2.132 1.440  H18 C4Y 44 
C4Y H19 H19 H 0 1 N N N -16.076 11.946 4.888  3.020  -3.141 0.244  H19 C4Y 45 
C4Y H20 H20 H 0 1 N N N -17.843 12.596 -0.427 4.070  0.280  1.676  H20 C4Y 46 
C4Y H21 H21 H 0 1 N N N -15.991 13.152 -1.993 4.322  2.519  2.669  H21 C4Y 47 
C4Y H22 H22 H 0 1 N N N -13.776 13.731 -1.087 5.027  4.416  1.266  H22 C4Y 48 
C4Y H23 H23 H 0 1 N N N -13.312 13.615 1.342  5.481  4.073  -1.130 H23 C4Y 49 
C4Y H24 H24 H 0 1 N N N -15.158 13.107 2.944  5.232  1.834  -2.122 H24 C4Y 50 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
C4Y C44 C45 DOUB Y N 1  
C4Y C44 C43 SING Y N 2  
C4Y C45 C46 SING Y N 3  
C4Y C43 C42 DOUB Y N 4  
C4Y C46 C47 DOUB Y N 5  
C4Y C42 C47 SING Y N 6  
C4Y C42 C26 SING N N 7  
C4Y C26 C27 SING N N 8  
C4Y C26 N25 SING N N 9  
C4Y C27 C28 SING N N 10 
C4Y C19 N18 SING N N 11 
C4Y C19 C20 SING N N 12 
C4Y C28 C29 SING N N 13 
C4Y N25 C20 SING N N 14 
C4Y N25 C29 SING N N 15 
C4Y O17 C2  DOUB N N 16 
C4Y N18 C2  SING N N 17 
C4Y C2  N1  SING N N 18 
C4Y C20 O23 DOUB N N 19 
C4Y N1  C3  SING N N 20 
C4Y C3  C4  SING N N 21 
C4Y C4  C9  DOUB Y N 22 
C4Y C4  C5  SING Y N 23 
C4Y C9  C8  SING Y N 24 
C4Y C5  C6  DOUB Y N 25 
C4Y C8  C7  DOUB Y N 26 
C4Y C6  C7  SING Y N 27 
C4Y C7  N16 SING N N 28 
C4Y N1  H1  SING N N 29 
C4Y C3  H2  SING N N 30 
C4Y C3  H3  SING N N 31 
C4Y C5  H4  SING N N 32 
C4Y C6  H5  SING N N 33 
C4Y C8  H6  SING N N 34 
C4Y C9  H7  SING N N 35 
C4Y N16 H8  SING N N 36 
C4Y N16 H9  SING N N 37 
C4Y N18 H10 SING N N 38 
C4Y C19 H11 SING N N 39 
C4Y C19 H12 SING N N 40 
C4Y C26 H13 SING N N 41 
C4Y C27 H14 SING N N 42 
C4Y C27 H15 SING N N 43 
C4Y C28 H16 SING N N 44 
C4Y C28 H17 SING N N 45 
C4Y C29 H18 SING N N 46 
C4Y C29 H19 SING N N 47 
C4Y C43 H20 SING N N 48 
C4Y C44 H21 SING N N 49 
C4Y C45 H22 SING N N 50 
C4Y C46 H23 SING N N 51 
C4Y C47 H24 SING N N 52 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
C4Y SMILES           ACDLabs              12.01 "N(Cc1ccc(cc1)N)C(=O)NCC(=O)N2CCCC2c3ccccc3"                                                                                                                   
C4Y InChI            InChI                1.03  "InChI=1S/C20H24N4O2/c21-17-10-8-15(9-11-17)13-22-20(26)23-14-19(25)24-12-4-7-18(24)16-5-2-1-3-6-16/h1-3,5-6,8-11,18H,4,7,12-14,21H2,(H2,22,23,26)/t18-/m1/s1" 
C4Y InChIKey         InChI                1.03  DBVKUBKWQMJAPI-GOSISDBHSA-N                                                                                                                                    
C4Y SMILES_CANONICAL CACTVS               3.385 "Nc1ccc(CNC(=O)NCC(=O)N2CCC[C@@H]2c3ccccc3)cc1"                                                                                                                
C4Y SMILES           CACTVS               3.385 "Nc1ccc(CNC(=O)NCC(=O)N2CCC[CH]2c3ccccc3)cc1"                                                                                                                  
C4Y SMILES_CANONICAL "OpenEye OEToolkits" 1.9.2 "c1ccc(cc1)[C@H]2CCCN2C(=O)CNC(=O)NCc3ccc(cc3)N"                                                                                                               
C4Y SMILES           "OpenEye OEToolkits" 1.9.2 "c1ccc(cc1)C2CCCN2C(=O)CNC(=O)NCc3ccc(cc3)N"                                                                                                                   
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
C4Y "SYSTEMATIC NAME" ACDLabs              12.01 "1-(4-aminobenzyl)-3-{2-oxo-2-[(2R)-2-phenylpyrrolidin-1-yl]ethyl}urea"                   
C4Y "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.9.2 "1-[(4-aminophenyl)methyl]-3-[2-oxidanylidene-2-[(2R)-2-phenylpyrrolidin-1-yl]ethyl]urea" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
C4Y "Create component" 2015-07-02 EBI  
C4Y "Initial release"  2016-07-20 RCSB 
# 
