data_A1AFY
# 
_chem_comp.id                                    A1AFY 
_chem_comp.name                                  "(R)-mevaldehyde" 
_chem_comp.type                                  non-polymer 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C6 H10 O4" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         "(3R)-3-hydroxy-3-methyl-5-oxopentanoic acid" 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2024-02-26 
_chem_comp.pdbx_modified_date                    2024-03-15 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        146.141 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     A1AFY 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        8VLQ 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  RCSB 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.pdbx_n_terminal_atom_flag 
_chem_comp_atom.pdbx_backbone_atom_flag 
_chem_comp_atom.pdbx_c_terminal_atom_flag 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
A1AFY C02 C1  C 0 1 N N R N N N 84.191 124.685 107.865 0.308  0.026  0.142  C02 A1AFY 1  
A1AFY C03 C2  C 0 1 N N N N N N 83.250 124.292 106.701 0.401  -0.753 -1.172 C03 A1AFY 2  
A1AFY C04 C3  C 0 1 N N N N N N 84.798 123.427 108.509 -0.907 0.954  0.100  C04 A1AFY 3  
A1AFY C05 C4  C 0 1 N N N N N N 85.652 122.558 107.528 -2.158 0.135  -0.088 C05 A1AFY 4  
A1AFY C08 C5  C 0 1 N N N N N N 83.417 125.508 108.939 1.578  0.857  0.333  C08 A1AFY 5  
A1AFY C09 C6  C 0 1 N N N N N N 83.287 126.966 108.569 2.784  -0.043 0.252  C09 A1AFY 6  
A1AFY O01 O1  O 0 1 N N N N N N 85.130 125.559 107.314 0.171  -0.891 1.230  O01 A1AFY 7  
A1AFY O06 O2  O 0 1 N N N N N N 85.663 121.328 107.769 -3.354 0.742  -0.154 O06 A1AFY 8  
A1AFY O07 O3  O 0 1 N N N N N N 86.252 123.129 106.598 -2.085 -1.068 -0.179 O07 A1AFY 9  
A1AFY O10 O4  O 0 1 N N N N N N 83.472 127.860 109.369 3.667  0.201  -0.536 O10 A1AFY 10 
A1AFY H1  H1  H 0 1 N N N N N N 82.480 123.599 107.070 0.506  -0.054 -2.002 H1  A1AFY 11 
A1AFY H2  H2  H 0 1 N N N N N N 82.768 125.195 106.299 1.267  -1.414 -1.142 H2  A1AFY 12 
A1AFY H3  H3  H 0 1 N N N N N N 83.834 123.803 105.907 -0.504 -1.345 -1.308 H3  A1AFY 13 
A1AFY H4  H4  H 0 1 N N N N N N 83.977 122.806 108.896 -0.974 1.508  1.036  H4  A1AFY 14 
A1AFY H5  H5  H 0 1 N N N N N N 85.443 123.742 109.343 -0.803 1.653  -0.730 H5  A1AFY 15 
A1AFY H6  H6  H 0 1 N N N N N N 82.409 125.082 109.051 1.637  1.615  -0.448 H6  A1AFY 16 
A1AFY H7  H7  H 0 1 N N N N N N 83.955 125.434 109.895 1.552  1.342  1.309  H7  A1AFY 17 
A1AFY H8  H8  H 0 1 N N N N N N 83.019 127.223 107.555 2.859  -0.905 0.897  H8  A1AFY 18 
A1AFY H9  H9  H 0 1 N N N N N N 85.818 125.059 106.891 0.106  -0.466 2.096  H9  A1AFY 19 
A1AFY H10 H10 H 0 1 N N N N N N 86.206 120.884 107.128 -4.128 0.175  -0.276 H10 A1AFY 20 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
A1AFY O07 C05 DOUB N N 1  
A1AFY C03 C02 SING N N 2  
A1AFY O01 C02 SING N N 3  
A1AFY C05 O06 SING N N 4  
A1AFY C05 C04 SING N N 5  
A1AFY C02 C04 SING N N 6  
A1AFY C02 C08 SING N N 7  
A1AFY C09 C08 SING N N 8  
A1AFY C09 O10 DOUB N N 9  
A1AFY C03 H1  SING N N 10 
A1AFY C03 H2  SING N N 11 
A1AFY C03 H3  SING N N 12 
A1AFY C04 H4  SING N N 13 
A1AFY C04 H5  SING N N 14 
A1AFY C08 H6  SING N N 15 
A1AFY C08 H7  SING N N 16 
A1AFY C09 H8  SING N N 17 
A1AFY O01 H9  SING N N 18 
A1AFY O06 H10 SING N N 19 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
A1AFY SMILES           ACDLabs              12.01 "CC(O)(CC=O)CC(O)=O"                                                        
A1AFY InChI            InChI                1.06  "InChI=1S/C6H10O4/c1-6(10,2-3-7)4-5(8)9/h3,10H,2,4H2,1H3,(H,8,9)/t6-/m1/s1" 
A1AFY InChIKey         InChI                1.06  CWCYSIIDJAVQSK-ZCFIWIBFSA-N                                                 
A1AFY SMILES_CANONICAL CACTVS               3.385 "C[C@@](O)(CC=O)CC(O)=O"                                                    
A1AFY SMILES           CACTVS               3.385 "C[C](O)(CC=O)CC(O)=O"                                                      
A1AFY SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "C[C@@](CC=O)(CC(=O)O)O"                                                    
A1AFY SMILES           "OpenEye OEToolkits" 2.0.7 "CC(CC=O)(CC(=O)O)O"                                                        
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
A1AFY "SYSTEMATIC NAME" ACDLabs              12.01 "(3R)-3-hydroxy-3-methyl-5-oxopentanoic acid"                
A1AFY "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 "(3~{R})-3-methyl-3-oxidanyl-5-oxidanylidene-pentanoic acid" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
A1AFY "Create component" 2024-02-26 RCSB 
A1AFY "Initial release"  2024-03-20 RCSB 
# 
_pdbx_chem_comp_synonyms.ordinal      1 
_pdbx_chem_comp_synonyms.comp_id      A1AFY 
_pdbx_chem_comp_synonyms.name         "(3R)-3-hydroxy-3-methyl-5-oxopentanoic acid" 
_pdbx_chem_comp_synonyms.provenance   PDB 
_pdbx_chem_comp_synonyms.type         "systematic name" 
# 
