data_87Y
#

_chem_comp.id                                   87Y
_chem_comp.name                                 "7,8-DIHYDRO-6-HYDROXYMETHYL-7-METHYL-7-[2-PHENYLETHYL]-PTERIN"
_chem_comp.type                                 NON-POLYMER
_chem_comp.pdbx_type                            HETAIN
_chem_comp.formula                              "C16 H19 N5 O2"
_chem_comp.mon_nstd_parent_comp_id              ?
_chem_comp.pdbx_synonyms                        
;2-AMINO-6-HYDROXYMETHYL-7-METHYL-7-PHENETHYL-7,8-DIHYDRO-3H-PTERIDIN-4-ONE;
7,8-DIHYDRO-6-HYDROXYMETHYL-7-METHYL-7-[2-PHENYLETHYL]-PTERIN
;

_chem_comp.pdbx_formal_charge                   0
_chem_comp.pdbx_initial_date                    2000-01-24
_chem_comp.pdbx_modified_date                   2020-06-17
_chem_comp.pdbx_ambiguous_flag                  N
_chem_comp.pdbx_release_status                  REL
_chem_comp.pdbx_replaced_by                     ?
_chem_comp.pdbx_replaces                        ?
_chem_comp.formula_weight                       313.354
_chem_comp.one_letter_code                      ?
_chem_comp.three_letter_code                    87Y
_chem_comp.pdbx_model_coordinates_details       ?
_chem_comp.pdbx_model_coordinates_missing_flag  N
_chem_comp.pdbx_ideal_coordinates_details       ?
_chem_comp.pdbx_ideal_coordinates_missing_flag  N
_chem_comp.pdbx_model_coordinates_db_code       1DY3
_chem_comp.pdbx_subcomponent_list               ?
_chem_comp.pdbx_processing_site                 EBI
#   #
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
87Y  N2    N2    N  0  1  Y  N  N  16.636  30.962  15.501  -2.022   0.675   3.301  N2    87Y   1  
87Y  C3    C3    C  0  1  Y  N  N  17.399  31.751  16.293  -0.719   0.995   3.143  C3    87Y   2  
87Y  O8    O8    O  0  1  N  N  N  18.472  32.210  15.789  -0.226   1.928   3.755  O8    87Y   3  
87Y  C7    C7    C  0  1  Y  N  N  16.942  31.867  17.673   0.055   0.225   2.253  C7    87Y   4  
87Y  N10   N10   N  0  1  N  N  N  17.718  32.599  18.607   1.373   0.499   2.037  N10   87Y   5  
87Y  C12   C12   C  0  1  N  N  N  17.288  32.844  19.784   2.022  -0.023   1.055  C12   87Y   6  
87Y  C15   C15   C  0  1  N  N  N  17.924  33.745  20.807   3.488   0.287   0.893  C15   87Y   7  
87Y  O16   O16   O  0  1  N  N  N  19.271  33.683  20.389   3.907   1.167   1.938  O16   87Y   8  
87Y  C11   C11   C  0  1  N  N  S  15.929  32.422  20.289   1.349  -0.941   0.067  C11   87Y   9  
87Y  C14   C14   C  0  1  N  N  N  15.764  32.037  21.735   0.850  -0.127  -1.128  C14   87Y  10  
87Y  C13   C13   C  0  1  N  N  N  15.181  33.836  20.108   2.347  -1.997  -0.412  C13   87Y  11  
87Y  N9    N9    N  0  1  N  N  N  15.193  31.601  19.313   0.209  -1.602   0.722  N9    87Y  12  
87Y  C6    C6    C  0  1  Y  N  N  15.741  31.402  18.103  -0.559  -0.840   1.582  C6    87Y  13  
87Y  N4    N4    N  0  1  Y  N  N  15.043  30.628  17.143  -1.849  -1.097   1.781  N4    87Y  14  
87Y  C1    C1    C  0  1  Y  N  N  15.512  30.392  15.941  -2.565  -0.366   2.613  C1    87Y  15  
87Y  N5    N5    N  0  1  N  N  N  14.825  29.597  15.134  -3.889  -0.663   2.790  N5    87Y  16  
87Y  C17   C17   C  0  1  N  N  N  16.578  30.697  21.847   0.164  -1.059  -2.128  C17   87Y  17  
87Y  C18   C18   C  0  1  Y  N  N  16.097  30.055  23.122  -0.326  -0.258  -3.306  C18   87Y  18  
87Y  C19   C19   C  0  1  Y  N  N  16.283  30.607  24.376   0.494  -0.065  -4.402  C19   87Y  19  
87Y  C20   C20   C  0  1  Y  N  N  15.882  30.041  25.589   0.043   0.669  -5.482  C20   87Y  20  
87Y  C21   C21   C  0  1  Y  N  N  15.235  28.798  25.525  -1.227   1.211  -5.468  C21   87Y  21  
87Y  C22   C22   C  0  1  Y  N  N  15.053  28.238  24.256  -2.049   1.018  -4.373  C22   87Y  22  
87Y  C23   C23   C  0  1  Y  N  N  15.459  28.797  23.039  -1.600   0.279  -3.294  C23   87Y  23  
87Y  H2    H2    H  0  1  N  N  N  16.918  30.790  14.536  -2.575   1.191   3.908  H2    87Y  24  
87Y  H152  2H15  H  0  0  N  N  N  17.488  34.768  20.890   4.063  -0.637   0.944  H152  87Y  25  
87Y  H151  1H15  H  0  0  N  N  N  17.734  33.479  21.873   3.654   0.765  -0.072  H151  87Y  26  
87Y  H16   H16   H  0  1  N  N  N  19.672  34.252  21.035   4.848   1.340   1.797  H16   87Y  27  
87Y  H142  2H14  H  0  0  N  N  N  16.067  32.825  22.462   0.140   0.624  -0.785  H142  87Y  28  
87Y  H141  1H14  H  0  0  N  N  N  14.705  31.966  22.077   1.695   0.364  -1.610  H141  87Y  29  
87Y  H133  3H13  H  0  0  N  N  N  14.177  33.524  20.480   2.701  -2.576   0.440  H133  87Y  30  
87Y  H132  2H13  H  0  0  N  N  N  15.648  34.718  20.603   1.858  -2.661  -1.124  H132  87Y  31  
87Y  H131  1H13  H  0  0  N  N  N  15.218  34.297  19.093   3.192  -1.505  -0.894  H131  87Y  32  
87Y  H9    H9    H  0  1  N  N  N  14.256  31.987  19.193   0.005  -2.536   0.556  H9    87Y  33  
87Y  H52   2H5   H  0  1  N  N  N  13.966  29.161  15.470  -4.289  -1.403   2.307  H52   87Y  34  
87Y  H51   1H5   H  0  1  N  N  N  15.447  28.866  14.789  -4.428  -0.134   3.400  H51   87Y  35  
87Y  H172  2H17  H  0  0  N  N  N  16.492  30.040  20.950   0.875  -1.811  -2.471  H172  87Y  36  
87Y  H171  1H17  H  0  0  N  N  N  17.683  30.834  21.799  -0.680  -1.551  -1.646  H171  87Y  37  
87Y  H19   H19   H  0  1  N  N  N  16.795  31.583  24.411   1.487  -0.489  -4.413  H19   87Y  38  
87Y  H20   H20   H  0  1  N  N  N  16.067  30.550  26.549   0.685   0.820  -6.338  H20   87Y  39  
87Y  H21   H21   H  0  1  N  N  N  14.884  28.282  26.434  -1.579   1.786  -6.312  H21   87Y  40  
87Y  H22   H22   H  0  1  N  N  N  14.540  27.262  24.210  -3.042   1.441  -4.361  H22   87Y  41  
87Y  H23   H23   H  0  1  N  N  N  15.287  28.281  22.079  -2.241   0.128  -2.438  H23   87Y  42  
#   #
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
87Y  N2   C3    SING  Y  N   1  
87Y  N2   C1    SING  Y  N   2  
87Y  N2   H2    SING  N  N   3  
87Y  C3   O8    DOUB  N  N   4  
87Y  C3   C7    SING  Y  N   5  
87Y  C7   N10   SING  N  N   6  
87Y  C7   C6    DOUB  Y  N   7  
87Y  N10  C12   DOUB  N  N   8  
87Y  C12  C15   SING  N  N   9  
87Y  C12  C11   SING  N  N  10  
87Y  C15  O16   SING  N  N  11  
87Y  C15  H152  SING  N  N  12  
87Y  C15  H151  SING  N  N  13  
87Y  O16  H16   SING  N  N  14  
87Y  C11  C14   SING  N  N  15  
87Y  C11  C13   SING  N  N  16  
87Y  C11  N9    SING  N  N  17  
87Y  C14  C17   SING  N  N  18  
87Y  C14  H142  SING  N  N  19  
87Y  C14  H141  SING  N  N  20  
87Y  C13  H133  SING  N  N  21  
87Y  C13  H132  SING  N  N  22  
87Y  C13  H131  SING  N  N  23  
87Y  N9   C6    SING  N  N  24  
87Y  N9   H9    SING  N  N  25  
87Y  C6   N4    SING  Y  N  26  
87Y  N4   C1    DOUB  Y  N  27  
87Y  C1   N5    SING  N  N  28  
87Y  N5   H52   SING  N  N  29  
87Y  N5   H51   SING  N  N  30  
87Y  C17  C18   SING  N  N  31  
87Y  C17  H172  SING  N  N  32  
87Y  C17  H171  SING  N  N  33  
87Y  C18  C19   DOUB  Y  N  34  
87Y  C18  C23   SING  Y  N  35  
87Y  C19  C20   SING  Y  N  36  
87Y  C19  H19   SING  N  N  37  
87Y  C20  C21   DOUB  Y  N  38  
87Y  C20  H20   SING  N  N  39  
87Y  C21  C22   SING  Y  N  40  
87Y  C21  H21   SING  N  N  41  
87Y  C22  C23   DOUB  Y  N  42  
87Y  C22  H22   SING  N  N  43  
87Y  C23  H23   SING  N  N  44  
#   #
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
87Y  SMILES            ACDLabs               10.04  "O=C1C=2N=C(CO)C(NC=2N=C(N1)N)(CCc3ccccc3)C"  
87Y  SMILES_CANONICAL  CACTVS                3.341  "C[C@@]1(CCc2ccccc2)NC3=C(N=C1CO)C(=O)NC(=N3)N"  
87Y  SMILES            CACTVS                3.341  "C[C]1(CCc2ccccc2)NC3=C(N=C1CO)C(=O)NC(=N3)N"  
87Y  SMILES_CANONICAL  "OpenEye OEToolkits"  1.5.0  "C[C@@]1(C(=NC2=C(N1)N=C(NC2=O)N)CO)CCc3ccccc3"  
87Y  SMILES            "OpenEye OEToolkits"  1.5.0  "CC1(C(=NC2=C(N1)N=C(NC2=O)N)CO)CCc3ccccc3"  
87Y  InChI             InChI                 1.03   "InChI=1S/C16H19N5O2/c1-16(8-7-10-5-3-2-4-6-10)11(9-22)18-12-13(21-16)19-15(17)20-14(12)23/h2-6,22H,7-9H2,1H3,(H4,17,19,20,21,23)/t16-/m0/s1"  
87Y  InChIKey          InChI                 1.03   XMFJTCGUDFSWSW-INIZCTEOSA-N  
#   #
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
87Y  "SYSTEMATIC NAME"  ACDLabs               10.04  "(7S)-2-amino-6-(hydroxymethyl)-7-methyl-7-(2-phenylethyl)-7,8-dihydropteridin-4(3H)-one"  
87Y  "SYSTEMATIC NAME"  "OpenEye OEToolkits"  1.5.0  "(7S)-2-amino-6-(hydroxymethyl)-7-methyl-7-phenethyl-3,8-dihydropteridin-4-one"  
#   #
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
87Y  "Create component"   2000-01-24  EBI   
87Y  "Modify descriptor"  2011-06-04  RCSB  
87Y  "Modify synonyms"    2020-06-05  PDBE  
#   #
loop_
_pdbx_chem_comp_synonyms.ordinal
_pdbx_chem_comp_synonyms.comp_id
_pdbx_chem_comp_synonyms.name
_pdbx_chem_comp_synonyms.provenance
_pdbx_chem_comp_synonyms.type
1  87Y  "2-AMINO-6-HYDROXYMETHYL-7-METHYL-7-PHENETHYL-7,8-DIHYDRO-3H-PTERIDIN-4-ONE"  ?  ?  
2  87Y  "7,8-DIHYDRO-6-HYDROXYMETHYL-7-METHYL-7-[2-PHENYLETHYL]-PTERIN"               ?  ?  
##
