data_52Y
# 
_chem_comp.id                                    52Y 
_chem_comp.name                                  
;methyl (2Z)-cyano[3-(3-fluoro-4'-methoxybiphenyl-4-yl)-4-oxo-1,3-thiazolidin-2-ylidene]acetate
;
_chem_comp.type                                  NON-POLYMER 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C20 H15 F N2 O4 S" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2015-03-11 
_chem_comp.pdbx_modified_date                    2016-03-04 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        398.408 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     52Y 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        4YLW 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  PDBJ 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
52Y C1  C1  C 0 1 N N N 30.917 14.323 -3.057 8.116  -0.878 -1.008 C1  52Y 1  
52Y O1  O1  O 0 1 N N N 31.674 14.193 -1.851 7.439  -0.666 0.233  O1  52Y 2  
52Y C2  C2  C 0 1 Y N N 31.728 12.910 -1.245 6.110  -0.391 0.171  C2  52Y 3  
52Y C3  C3  C 0 1 Y N N 31.989 12.840 0.145  5.392  -0.174 1.339  C3  52Y 4  
52Y C4  C4  C 0 1 Y N N 31.959 11.626 0.794  4.043  0.105  1.280  C4  52Y 5  
52Y C5  C5  C 0 1 Y N N 31.799 10.489 0.036  3.400  0.170  0.045  C5  52Y 6  
52Y C6  C6  C 0 1 Y N N 31.525 10.475 -1.340 4.123  -0.048 -1.127 C6  52Y 7  
52Y C7  C7  C 0 1 Y N N 31.477 11.710 -1.996 5.473  -0.322 -1.061 C7  52Y 8  
52Y C8  C8  C 0 1 Y N N 31.824 9.189  0.717  1.949  0.470  -0.023 C8  52Y 9  
52Y C9  C9  C 0 1 Y N N 32.241 8.143  -0.062 1.227  0.693  1.148  C9  52Y 10 
52Y C10 C10 C 0 1 Y N N 32.236 6.884  0.533  -0.123 0.972  1.082  C10 52Y 11 
52Y C11 C11 C 0 1 Y N N 31.829 6.696  1.883  -0.763 1.030  -0.152 C11 52Y 12 
52Y C12 C12 C 0 1 Y N N 31.381 7.788  2.669  -0.044 0.808  -1.319 C12 52Y 13 
52Y C13 C13 C 0 1 Y N N 31.441 9.040  2.012  1.306  0.535  -1.258 C13 52Y 14 
52Y N14 N1  N 0 1 N N N 31.758 5.366  2.422  -2.134 1.312  -0.217 N14 52Y 15 
52Y C15 C14 C 0 1 N N N 30.758 4.550  1.924  -2.543 2.567  -0.323 C15 52Y 16 
52Y C16 C15 C 0 1 N N N 30.685 3.177  2.618  -4.049 2.693  -0.381 C16 52Y 17 
52Y S17 S1  S 0 1 N N N 31.755 3.358  4.004  -4.619 0.965  -0.273 S17 52Y 18 
52Y C18 C16 C 0 1 N N N 32.462 4.866  3.476  -3.036 0.296  -0.178 C18 52Y 19 
52Y O19 O2  O 0 1 N N N 29.939 4.858  1.010  -1.790 3.516  -0.367 O19 52Y 20 
52Y F20 F1  F 0 1 N N N 32.628 5.822  -0.218 -0.825 1.189  2.217  F20 52Y 21 
52Y C21 C17 C 0 1 N N N 33.519 5.518  4.055  -2.730 -1.063 -0.075 C21 52Y 22 
52Y C22 C18 C 0 1 N N N 34.158 4.867  5.226  -3.772 -2.024 -0.044 C22 52Y 23 
52Y C23 C19 C 0 1 N N N 34.109 6.570  3.640  -1.364 -1.485 0.000  C23 52Y 24 
52Y N24 N2  N 0 1 N N N 34.672 7.581  3.350  -0.280 -1.820 0.059  N24 52Y 25 
52Y O25 O3  O 0 1 N N N 35.336 5.418  5.857  -3.476 -3.336 0.056  O25 52Y 26 
52Y O26 O4  O 0 1 N N N 33.656 3.848  5.705  -4.933 -1.665 -0.108 O26 52Y 27 
52Y C27 C20 C 0 1 N N N 35.934 4.788  7.014  -4.575 -4.249 0.081  C27 52Y 28 
52Y H1  H1  H 0 1 N N N 30.964 15.364 -3.410 9.169  -1.088 -0.816 H1  52Y 29 
52Y H2  H2  H 0 1 N N N 31.335 13.656 -3.826 7.666  -1.724 -1.527 H2  52Y 30 
52Y H3  H3  H 0 1 N N N 29.869 14.049 -2.864 8.030  0.015  -1.626 H3  52Y 31 
52Y H4  H4  H 0 1 N N N 32.212 13.741 0.697  5.891  -0.225 2.296  H4  52Y 32 
52Y H5  H5  H 0 1 N N N 32.058 11.568 1.868  3.485  0.273  2.189  H5  52Y 33 
52Y H6  H6  H 0 1 N N N 31.358 9.549  -1.871 3.628  0.001  -2.085 H6  52Y 34 
52Y H7  H7  H 0 1 N N N 31.255 11.761 -3.052 6.035  -0.491 -1.968 H7  52Y 35 
52Y H8  H8  H 0 1 N N N 32.557 8.287  -1.085 1.724  0.648  2.106  H8  52Y 36 
52Y H9  H9  H 0 1 N N N 31.025 7.674  3.682  -0.542 0.853  -2.276 H9  52Y 37 
52Y H10 H10 H 0 1 N N N 31.168 9.924  2.569  1.865  0.366  -2.167 H10 52Y 38 
52Y H11 H11 H 0 1 N N N 29.657 2.954  2.941  -4.420 3.274  0.464  H11 52Y 39 
52Y H12 H12 H 0 1 N N N 31.040 2.379  1.949  -4.361 3.143  -1.324 H12 52Y 40 
52Y H13 H13 H 0 1 N N N 36.814 5.366  7.333  -5.152 -4.148 -0.837 H13 52Y 41 
52Y H14 H14 H 0 1 N N N 35.201 4.755  7.833  -4.199 -5.269 0.164  H14 52Y 42 
52Y H15 H15 H 0 1 N N N 36.242 3.764  6.756  -5.212 -4.027 0.937  H15 52Y 43 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
52Y C1  O1  SING N N 1  
52Y C7  C6  DOUB Y N 2  
52Y C7  C2  SING Y N 3  
52Y O1  C2  SING N N 4  
52Y C6  C5  SING Y N 5  
52Y C2  C3  DOUB Y N 6  
52Y F20 C10 SING N N 7  
52Y C9  C10 SING Y N 8  
52Y C9  C8  DOUB Y N 9  
52Y C5  C8  SING N N 10 
52Y C5  C4  DOUB Y N 11 
52Y C3  C4  SING Y N 12 
52Y C10 C11 DOUB Y N 13 
52Y C8  C13 SING Y N 14 
52Y O19 C15 DOUB N N 15 
52Y C11 N14 SING N N 16 
52Y C11 C12 SING Y N 17 
52Y C15 N14 SING N N 18 
52Y C15 C16 SING N N 19 
52Y C13 C12 DOUB Y N 20 
52Y N14 C18 SING N N 21 
52Y C16 S17 SING N N 22 
52Y N24 C23 TRIP N N 23 
52Y C18 S17 SING N N 24 
52Y C18 C21 DOUB N Z 25 
52Y C23 C21 SING N N 26 
52Y C21 C22 SING N N 27 
52Y C22 O26 DOUB N N 28 
52Y C22 O25 SING N N 29 
52Y O25 C27 SING N N 30 
52Y C1  H1  SING N N 31 
52Y C1  H2  SING N N 32 
52Y C1  H3  SING N N 33 
52Y C3  H4  SING N N 34 
52Y C4  H5  SING N N 35 
52Y C6  H6  SING N N 36 
52Y C7  H7  SING N N 37 
52Y C9  H8  SING N N 38 
52Y C12 H9  SING N N 39 
52Y C13 H10 SING N N 40 
52Y C16 H11 SING N N 41 
52Y C16 H12 SING N N 42 
52Y C27 H13 SING N N 43 
52Y C27 H14 SING N N 44 
52Y C27 H15 SING N N 45 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
52Y SMILES           ACDLabs              12.01 "COc3ccc(c1ccc(c(c1)F)N2/C(SCC2=O)=C(/C(=O)OC)C#N)cc3"                                                                                
52Y InChI            InChI                1.03  "InChI=1S/C20H15FN2O4S/c1-26-14-6-3-12(4-7-14)13-5-8-17(16(21)9-13)23-18(24)11-28-19(23)15(10-22)20(25)27-2/h3-9H,11H2,1-2H3/b19-15-" 
52Y InChIKey         InChI                1.03  VIKSKZVEJICSLD-CYVLTUHYSA-N                                                                                                           
52Y SMILES_CANONICAL CACTVS               3.385 "COC(=O)/C(C#N)=C/1SCC(=O)N/1c2ccc(cc2F)c3ccc(OC)cc3"                                                                                 
52Y SMILES           CACTVS               3.385 "COC(=O)C(C#N)=C1SCC(=O)N1c2ccc(cc2F)c3ccc(OC)cc3"                                                                                    
52Y SMILES_CANONICAL "OpenEye OEToolkits" 1.9.2 "COc1ccc(cc1)c2ccc(c(c2)F)N\3C(=O)CS/C3=C(/C#N)\C(=O)OC"                                                                              
52Y SMILES           "OpenEye OEToolkits" 1.9.2 "COc1ccc(cc1)c2ccc(c(c2)F)N3C(=O)CSC3=C(C#N)C(=O)OC"                                                                                  
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
52Y "SYSTEMATIC NAME" ACDLabs              12.01 
;methyl (2Z)-cyano[3-(3-fluoro-4'-methoxybiphenyl-4-yl)-4-oxo-1,3-thiazolidin-2-ylidene]acetate
;
52Y "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.9.2 "methyl (2Z)-2-cyano-2-[3-[2-fluoranyl-4-(4-methoxyphenyl)phenyl]-4-oxidanylidene-1,3-thiazolidin-2-ylidene]ethanoate" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
52Y "Create component" 2015-03-11 PDBJ 
52Y "Initial release"  2016-03-09 RCSB 
# 
