data_1AY
# 
_chem_comp.id                                    1AY 
_chem_comp.name                                  "(1R)-N~2~-[5-chloro-2-(5-chloropyridin-2-yl)-6-methylpyrimidin-4-yl]-1-phenyl-N~1~-(4-phenylbutyl)ethane-1,2-diamine" 
_chem_comp.type                                  NON-POLYMER 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C28 H29 Cl2 N5" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2012-11-16 
_chem_comp.pdbx_modified_date                    2014-03-26 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        506.469 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     1AY 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        4HXX 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  RCSB 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
1AY C3  C3  C  0 1 Y N N 21.727 19.601 13.312 -5.218 0.655  -0.161 C3  1AY 1  
1AY C5  C5  C  0 1 Y N N 22.300 18.438 13.795 -6.414 1.343  -0.346 C5  1AY 2  
1AY C6  C6  C  0 1 Y N N 22.961 17.610 12.897 -7.582 0.624  -0.538 C6  1AY 3  
1AY C4  C4  C  0 1 Y N N 21.054 20.448 14.173 -3.958 1.412  0.046  C4  1AY 4  
1AY N2  N2  N  0 1 Y N N 21.810 19.912 11.978 -5.194 -0.671 -0.162 N2  1AY 5  
1AY CL8 CL8 CL 0 0 N N N 23.869 16.908 10.406 -8.947 -1.712 -0.775 CL8 1AY 6  
1AY C7  C7  C  0 1 Y N N 23.004 17.950 11.550 -7.512 -0.763 -0.538 C7  1AY 7  
1AY C1  C1  C  0 1 Y N N 22.432 19.114 11.094 -6.290 -1.381 -0.337 C1  1AY 8  
1AY N25 N25 N  0 1 Y N N 20.493 21.559 13.649 -3.996 2.737  0.056  N25 1AY 9  
1AY C23 C23 C  0 1 Y N N 19.832 22.449 14.413 -2.893 3.448  0.238  C23 1AY 10 
1AY C24 C24 C  0 1 N N N 19.224 23.697 13.794 -2.951 4.953  0.247  C24 1AY 11 
1AY N9  N9  N  0 1 Y N N 20.985 20.190 15.509 -2.825 0.746  0.221  N9  1AY 12 
1AY C10 C10 C  0 1 Y N N 20.322 21.057 16.331 -1.682 1.394  0.409  C10 1AY 13 
1AY C21 C21 C  0 1 Y N N 19.748 22.200 15.774 -1.689 2.793  0.419  C21 1AY 14 
1AY CL2 CL2 CL 0 0 N N N 18.898 23.418 16.769 -0.220 3.686  0.660  CL2 1AY 15 
1AY N11 N11 N  0 1 N N N 20.233 20.813 17.669 -0.499 0.695  0.592  N11 1AY 16 
1AY C12 C12 C  0 1 N N N 20.797 19.622 18.323 -0.504 -0.770 0.580  C12 1AY 17 
1AY C13 C13 C  0 1 N N R 20.671 19.838 19.848 0.918  -1.287 0.803  C13 1AY 18 
1AY C14 C14 C  0 1 Y N N 19.317 19.528 20.432 0.934  -2.788 0.668  C14 1AY 19 
1AY C26 C26 C  0 1 Y N N 18.269 20.467 20.384 0.962  -3.369 -0.586 C26 1AY 20 
1AY C27 C27 C  0 1 Y N N 17.014 20.169 20.939 0.976  -4.745 -0.709 C27 1AY 21 
1AY C28 C28 C  0 1 Y N N 16.790 18.933 21.562 0.963  -5.541 0.421  C28 1AY 22 
1AY C29 C29 C  0 1 Y N N 17.826 17.994 21.627 0.936  -4.960 1.675  C29 1AY 23 
1AY C30 C30 C  0 1 Y N N 19.079 18.296 21.071 0.926  -3.583 1.799  C30 1AY 24 
1AY N15 N15 N  0 1 N N N 21.767 19.637 20.651 1.816  -0.696 -0.198 N15 1AY 25 
1AY C16 C16 C  0 1 N N N 22.553 20.710 21.261 3.201  -0.662 0.292  C16 1AY 26 
1AY C17 C17 C  0 1 N N N 23.317 20.298 22.525 4.105  -0.042 -0.775 C17 1AY 27 
1AY C18 C18 C  0 1 N N N 22.429 19.715 23.632 5.547  -0.007 -0.264 C18 1AY 28 
1AY C19 C19 C  0 1 N N N 23.039 18.445 24.236 6.451  0.614  -1.332 C19 1AY 29 
1AY C31 C31 C  0 1 Y N N 22.026 17.335 24.477 7.871  0.648  -0.829 C31 1AY 30 
1AY C36 C36 C  0 1 Y N N 21.188 16.874 23.447 8.328  1.747  -0.125 C36 1AY 31 
1AY C35 C35 C  0 1 Y N N 20.264 15.852 23.687 9.631  1.778  0.336  C35 1AY 32 
1AY C34 C34 C  0 1 Y N N 20.176 15.271 24.957 10.476 0.711  0.094  C34 1AY 33 
1AY C33 C33 C  0 1 Y N N 21.012 15.719 25.988 10.018 -0.387 -0.609 C33 1AY 34 
1AY C32 C32 C  0 1 Y N N 21.938 16.743 25.742 8.714  -0.421 -1.066 C32 1AY 35 
1AY H1  H1  H  0 1 N N N 22.235 18.181 14.842 -6.431 2.423  -0.340 H1  1AY 36 
1AY H2  H2  H  0 1 N N N 23.439 16.706 13.244 -8.524 1.130  -0.684 H2  1AY 37 
1AY H3  H3  H  0 1 N N N 22.482 19.381 10.049 -6.233 -2.459 -0.328 H3  1AY 38 
1AY H4  H4  H  0 1 N N N 19.424 23.705 12.712 -3.124 5.304  1.265  H4  1AY 39 
1AY H5  H5  H  0 1 N N N 18.138 23.700 13.966 -2.006 5.356  -0.120 H5  1AY 40 
1AY H6  H6  H  0 1 N N N 19.671 24.590 14.256 -3.763 5.290  -0.396 H6  1AY 41 
1AY H7  H7  H  0 1 N N N 20.661 21.598 18.118 0.332  1.176  0.729  H7  1AY 42 
1AY H8  H8  H  0 1 N N N 20.236 18.725 18.021 -1.154 -1.137 1.375  H8  1AY 43 
1AY H9  H9  H  0 1 N N N 21.855 19.504 18.045 -0.873 -1.123 -0.383 H9  1AY 44 
1AY H10 H10 H  0 1 N N N 20.621 20.937 19.862 1.253  -1.008 1.802  H10 1AY 45 
1AY H11 H11 H  0 1 N N N 18.432 21.426 19.916 0.972  -2.747 -1.469 H11 1AY 46 
1AY H12 H12 H  0 1 N N N 16.217 20.896 20.886 0.998  -5.199 -1.689 H12 1AY 47 
1AY H13 H13 H  0 1 N N N 15.824 18.707 21.989 0.974  -6.617 0.324  H13 1AY 48 
1AY H14 H14 H  0 1 N N N 17.662 17.039 22.104 0.925  -5.582 2.558  H14 1AY 49 
1AY H15 H15 H  0 1 N N N 19.876 17.570 21.135 0.908  -3.129 2.778  H15 1AY 50 
1AY H16 H16 H  0 1 N N N 21.444 19.074 21.412 1.755  -1.190 -1.075 H16 1AY 51 
1AY H18 H18 H  0 1 N N N 23.283 21.066 20.519 3.250  -0.064 1.202  H18 1AY 52 
1AY H19 H19 H  0 1 N N N 21.869 21.530 21.525 3.535  -1.677 0.506  H19 1AY 53 
1AY H20 H20 H  0 1 N N N 24.063 19.540 22.246 4.056  -0.640 -1.685 H20 1AY 54 
1AY H21 H21 H  0 1 N N N 23.828 21.186 22.924 3.770  0.974  -0.989 H21 1AY 55 
1AY H22 H22 H  0 1 N N N 22.310 20.466 24.427 5.596  0.591  0.646  H22 1AY 56 
1AY H23 H23 H  0 1 N N N 21.444 19.471 23.208 5.881  -1.022 -0.051 H23 1AY 57 
1AY H24 H24 H  0 1 N N N 23.810 18.068 23.547 6.402  0.016  -2.242 H24 1AY 58 
1AY H25 H25 H  0 1 N N N 23.503 18.706 25.198 6.116  1.629  -1.545 H25 1AY 59 
1AY H26 H26 H  0 1 N N N 21.258 17.312 22.463 7.668  2.580  0.064  H26 1AY 60 
1AY H27 H27 H  0 1 N N N 19.618 15.511 22.892 9.989  2.637  0.885  H27 1AY 61 
1AY H28 H28 H  0 1 N N N 19.465 14.479 25.142 11.494 0.736  0.454  H28 1AY 62 
1AY H29 H29 H  0 1 N N N 20.943 15.276 26.971 10.679 -1.221 -0.799 H29 1AY 63 
1AY H30 H30 H  0 1 N N N 22.589 17.078 26.536 8.355  -1.281 -1.612 H30 1AY 64 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
1AY CL8 C7  SING N N 1  
1AY C1  C7  DOUB Y N 2  
1AY C1  N2  SING Y N 3  
1AY C7  C6  SING Y N 4  
1AY N2  C3  DOUB Y N 5  
1AY C6  C5  DOUB Y N 6  
1AY C3  C5  SING Y N 7  
1AY C3  C4  SING N N 8  
1AY N25 C4  DOUB Y N 9  
1AY N25 C23 SING Y N 10 
1AY C24 C23 SING N N 11 
1AY C4  N9  SING Y N 12 
1AY C23 C21 DOUB Y N 13 
1AY N9  C10 DOUB Y N 14 
1AY C21 C10 SING Y N 15 
1AY C21 CL2 SING N N 16 
1AY C10 N11 SING N N 17 
1AY N11 C12 SING N N 18 
1AY C12 C13 SING N N 19 
1AY C13 C14 SING N N 20 
1AY C13 N15 SING N N 21 
1AY C26 C14 DOUB Y N 22 
1AY C26 C27 SING Y N 23 
1AY C14 C30 SING Y N 24 
1AY N15 C16 SING N N 25 
1AY C27 C28 DOUB Y N 26 
1AY C30 C29 DOUB Y N 27 
1AY C16 C17 SING N N 28 
1AY C28 C29 SING Y N 29 
1AY C17 C18 SING N N 30 
1AY C36 C35 DOUB Y N 31 
1AY C36 C31 SING Y N 32 
1AY C18 C19 SING N N 33 
1AY C35 C34 SING Y N 34 
1AY C19 C31 SING N N 35 
1AY C31 C32 DOUB Y N 36 
1AY C34 C33 DOUB Y N 37 
1AY C32 C33 SING Y N 38 
1AY C5  H1  SING N N 39 
1AY C6  H2  SING N N 40 
1AY C1  H3  SING N N 41 
1AY C24 H4  SING N N 42 
1AY C24 H5  SING N N 43 
1AY C24 H6  SING N N 44 
1AY N11 H7  SING N N 45 
1AY C12 H8  SING N N 46 
1AY C12 H9  SING N N 47 
1AY C13 H10 SING N N 48 
1AY C26 H11 SING N N 49 
1AY C27 H12 SING N N 50 
1AY C28 H13 SING N N 51 
1AY C29 H14 SING N N 52 
1AY C30 H15 SING N N 53 
1AY N15 H16 SING N N 54 
1AY C16 H18 SING N N 55 
1AY C16 H19 SING N N 56 
1AY C17 H20 SING N N 57 
1AY C17 H21 SING N N 58 
1AY C18 H22 SING N N 59 
1AY C18 H23 SING N N 60 
1AY C19 H24 SING N N 61 
1AY C19 H25 SING N N 62 
1AY C36 H26 SING N N 63 
1AY C35 H27 SING N N 64 
1AY C34 H28 SING N N 65 
1AY C33 H29 SING N N 66 
1AY C32 H30 SING N N 67 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
1AY SMILES           ACDLabs              12.01 "Clc4cnc(c1nc(c(Cl)c(n1)NCC(c2ccccc2)NCCCCc3ccccc3)C)cc4"                                                                                                                                                 
1AY InChI            InChI                1.03  "InChI=1S/C28H29Cl2N5/c1-20-26(30)28(35-27(34-20)24-16-15-23(29)18-32-24)33-19-25(22-13-6-3-7-14-22)31-17-9-8-12-21-10-4-2-5-11-21/h2-7,10-11,13-16,18,25,31H,8-9,12,17,19H2,1H3,(H,33,34,35)/t25-/m0/s1" 
1AY InChIKey         InChI                1.03  UZZVALJVPJZKDU-VWLOTQADSA-N                                                                                                                                                                               
1AY SMILES_CANONICAL CACTVS               3.385 "Cc1nc(nc(NC[C@H](NCCCCc2ccccc2)c3ccccc3)c1Cl)c4ccc(Cl)cn4"                                                                                                                                               
1AY SMILES           CACTVS               3.385 "Cc1nc(nc(NC[CH](NCCCCc2ccccc2)c3ccccc3)c1Cl)c4ccc(Cl)cn4"                                                                                                                                                
1AY SMILES_CANONICAL "OpenEye OEToolkits" 1.7.6 "Cc1c(c(nc(n1)c2ccc(cn2)Cl)NC[C@@H](c3ccccc3)NCCCCc4ccccc4)Cl"                                                                                                                                            
1AY SMILES           "OpenEye OEToolkits" 1.7.6 "Cc1c(c(nc(n1)c2ccc(cn2)Cl)NCC(c3ccccc3)NCCCCc4ccccc4)Cl"                                                                                                                                                 
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
1AY "SYSTEMATIC NAME" ACDLabs              12.01 "(1R)-N~2~-[5-chloro-2-(5-chloropyridin-2-yl)-6-methylpyrimidin-4-yl]-1-phenyl-N~1~-(4-phenylbutyl)ethane-1,2-diamine"   
1AY "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.7.6 "(1R)-N'-[5-chloranyl-2-(5-chloranylpyridin-2-yl)-6-methyl-pyrimidin-4-yl]-1-phenyl-N-(4-phenylbutyl)ethane-1,2-diamine" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
1AY "Create component"   2012-11-16 RCSB 
1AY "Modify name"        2012-11-30 RCSB 
1AY "Other modification" 2013-04-03 RCSB 
1AY "Initial release"    2013-04-03 RCSB 
1AY "Other modification" 2013-04-11 RCSB 
1AY "Modify formula"     2014-03-26 RCSB 
1AY "Modify name"        2013-03-26 RCSB 
# 
