data_0ZY
# 
_chem_comp.id                                    0ZY 
_chem_comp.name                                  "N-(tert-butoxycarbonyl)-L-alanyl-N-{(1R)-5-ammonio-1-[hydroxy(methoxy)boranyl]pentyl}-L-valinamide" 
_chem_comp.type                                  peptide-like 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C19 H40 B N4 O6" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    1 
_chem_comp.pdbx_initial_date                     2008-08-19 
_chem_comp.pdbx_modified_date                    2024-09-27 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        431.355 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     0ZY 
_chem_comp.pdbx_model_coordinates_details        "not provided" 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        1BTZ 
_chem_comp.pdbx_subcomponent_list                "BOC ALA VAL MJS" 
_chem_comp.pdbx_processing_site                  RCSB 
_chem_comp.pdbx_pcm                              Y 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.pdbx_backbone_atom_flag 
_chem_comp_atom.pdbx_n_terminal_atom_flag 
_chem_comp_atom.pdbx_c_terminal_atom_flag 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
0ZY O1   O1   O 0 1 N N N N N N 26.518 6.468  14.572 5.805  0.174  1.235  O1   BOC 1  
0ZY C    C    C 0 1 N N N N N N 26.638 7.602  14.093 5.619  0.561  0.098  C    BOC 2  
0ZY O2   O2   O 0 1 N N N N N N 26.458 7.836  12.727 6.667  0.878  -0.686 O2   BOC 3  
0ZY CT   CT   C 0 1 N N N N N N 25.701 7.082  11.758 7.990  0.734  -0.106 CT   BOC 4  
0ZY C1   C1   C 0 1 N N N N N N 24.256 6.847  12.294 8.211  -0.723 0.305  C1   BOC 5  
0ZY C2   C2   C 0 1 N N N N N N 25.472 7.830  10.422 9.045  1.138  -1.139 C2   BOC 6  
0ZY C3   C3   C 0 1 N N N N N N 26.472 5.769  11.434 8.110  1.635  1.124  C3   BOC 7  
0ZY N    N    N 0 1 N N N N N N 26.971 8.625  14.873 4.363  0.667  -0.380 N    ALA 8  
0ZY CA   CA   C 0 1 N N S N N N 27.206 8.485  16.293 3.223  0.317  0.471  CA   ALA 9  
0ZY C4   C4   C 0 1 N N N N N N 26.902 9.761  17.070 2.053  -0.075 -0.394 C    ALA 10 
0ZY O    O    O 0 1 N N N N N N 27.044 10.915 16.613 2.160  -0.062 -1.602 O    ALA 11 
0ZY CB   CB   C 0 1 N N N N N N 28.657 8.109  16.565 2.840  1.521  1.333  CB   ALA 12 
0ZY N1   N1   N 0 1 N N N N N N 26.446 9.457  18.288 0.887  -0.439 0.175  N    VAL 13 
0ZY CA1  CA1  C 0 1 N N S N N N 26.031 10.399 19.316 -0.251 -0.820 -0.665 CA   VAL 14 
0ZY C5   C5   C 0 1 N N N N N N 27.302 11.054 19.855 -1.534 -0.588 0.090  C    VAL 15 
0ZY O3   O3   O 0 1 N N N N N N 28.324 10.350 19.982 -1.513 -0.457 1.296  O    VAL 16 
0ZY CB1  CB1  C 0 1 N N N N N N 25.215 9.464  20.261 -0.139 -2.300 -1.036 CB   VAL 17 
0ZY CG1  CG1  C 0 1 N N N N N N 25.749 9.308  21.647 -0.280 -3.154 0.225  CG1  VAL 18 
0ZY CG2  CG2  C 0 1 N N N N N N 23.850 10.030 20.275 -1.248 -2.664 -2.026 CG2  VAL 19 
0ZY N2   N2   N 0 1 N N N N N N 27.317 12.369 20.104 -2.705 -0.525 -0.573 N    MJS 20 
0ZY CA2  CA2  C 0 1 N N R N N N 28.502 13.071 20.625 -3.937 -0.186 0.144  CA   MJS 21 
0ZY CB2  CB2  C 0 1 N N N N N N 28.645 14.391 19.827 -4.741 0.827  -0.673 CB   MJS 22 
0ZY CG   CG   C 0 1 N N N N N N 28.983 13.984 18.398 -5.961 1.278  0.132  CG   MJS 23 
0ZY CD   CD   C 0 1 N N N N N N 29.164 15.216 17.534 -6.828 2.199  -0.729 CD   MJS 24 
0ZY CE   CE   C 0 1 N N N N N N 29.187 14.858 16.057 -8.048 2.651  0.076  CE   MJS 25 
0ZY NZ   NZ   N 1 1 N N N N N N 29.373 16.048 15.258 -8.881 3.534  -0.751 NZ   MJS 26 
0ZY B    B    B 0 1 N N N N N N 28.260 13.251 22.242 -4.793 -1.485 0.357  B    MJS 27 
0ZY O4   O4   O 0 1 N N N N N N 27.831 11.990 22.842 -5.169 -2.278 -0.758 O    MJS 28 
0ZY O21  O21  O 0 1 N N N N N N 29.230 14.288 23.336 -5.192 -1.865 1.666  O2   MJS 29 
0ZY C6   C6   C 0 1 N N N N N N 29.334 13.410 24.575 -4.844 -0.918 2.678  C    MJS 30 
0ZY H11  H11  H 0 1 N N N N N N 24.276 6.792  13.392 8.126  -1.365 -0.572 H11  BOC 31 
0ZY H12  H12  H 0 1 N N N N N N 23.609 7.680  11.981 9.205  -0.831 0.740  H12  BOC 32 
0ZY H13  H13  H 0 1 N N N N N N 23.863 5.904  11.887 7.459  -1.011 1.040  H13  BOC 33 
0ZY H21  H21  H 0 1 N N N N N N 25.418 8.912  10.612 8.888  2.176  -1.432 H21  BOC 34 
0ZY H22  H22  H 0 1 N N N N N N 26.306 7.619  9.736  10.039 1.029  -0.704 H22  BOC 35 
0ZY H23  H23  H 0 1 N N N N N N 24.529 7.490  9.969  8.960  0.496  -2.015 H23  BOC 36 
0ZY H31  H31  H 0 1 N N N N N N 26.654 5.708  10.351 7.358  1.348  1.859  H31  BOC 37 
0ZY H32  H32  H 0 1 N N N N N N 27.434 5.768  11.968 9.103  1.527  1.559  H32  BOC 38 
0ZY H33  H33  H 0 1 N N N N N N 25.873 4.904  11.754 7.952  2.673  0.831  H33  BOC 39 
0ZY H    H    H 0 1 N N N N N N 27.063 9.531  14.460 4.214  0.976  -1.287 H    ALA 40 
0ZY HA   HA   H 0 1 N N N N N N 26.524 7.692  16.632 3.494  -0.520 1.115  HA   ALA 41 
0ZY HB1  HB1  H 0 1 N N N N N N 29.198 8.018  15.611 1.992  1.260  1.966  HB1  ALA 42 
0ZY HB2  HB2  H 0 1 N N N N N N 29.128 8.889  17.181 3.687  1.804  1.958  HB2  ALA 43 
0ZY HB3  HB3  H 0 1 N N N N N N 28.693 7.148  17.099 2.569  2.358  0.688  HB3  ALA 44 
0ZY H1   H1   H 0 1 N N N N N N 26.384 8.485  18.516 0.801  -0.449 1.141  H    VAL 45 
0ZY HA1  HA1  H 0 1 N N N N N N 25.404 11.263 19.050 -0.250 -0.217 -1.573 HA   VAL 46 
0ZY HB   HB   H 0 1 N N N N N N 25.265 8.436  19.873 0.832  -2.487 -1.495 HB   VAL 47 
0ZY HG11 HG11 H 0 0 N N N N N N 26.848 9.270  21.615 -1.219 -2.913 0.724  HG11 VAL 48 
0ZY HG12 HG12 H 0 0 N N N N N N 25.430 10.163 22.261 -0.275 -4.209 -0.048 HG12 VAL 49 
0ZY HG13 HG13 H 0 0 N N N N N N 25.363 8.376  22.086 0.552  -2.949 0.898  HG13 VAL 50 
0ZY HG21 HG21 H 0 0 N N N N N N 23.521 10.171 21.315 -2.219 -2.471 -1.570 HG21 VAL 51 
0ZY HG22 HG22 H 0 0 N N N N N N 23.850 11.000 19.756 -1.143 -2.059 -2.927 HG22 VAL 52 
0ZY HG23 HG23 H 0 0 N N N N N N 23.162 9.340  19.764 -1.172 -3.720 -2.285 HG23 VAL 53 
0ZY HN   HN   H 0 1 N N N N N N 26.487 12.898 19.928 -2.733 -0.705 -1.526 HN   MJS 54 
0ZY HNZ  HNZ  H 0 1 N N N N N N 30.226 15.972 14.741 -8.343 4.342  -1.027 HNZ  MJS 55 
0ZY HNZA HNZA H 0 0 N N N N N N 29.416 16.848 15.856 -9.187 3.036  -1.573 HNZA MJS 56 
0ZY HNZB HNZB H 0 0 N N N N N N 28.606 16.147 14.624 -9.686 3.832  -0.220 HNZB MJS 57 
0ZY HO   HO   H 0 1 N N N N N N 27.738 11.332 22.164 -4.788 -1.983 -1.597 HO   MJS 58 
0ZY HA2  HA2  H 0 1 N N N N N N 29.454 12.534 20.499 -3.686 0.247  1.113  HA   MJS 59 
0ZY HB4  HB4  H 0 1 N N N N N N 27.707 14.965 19.855 -4.115 1.690  -0.900 HB   MJS 60 
0ZY HBA  HBA  H 0 1 N N N N N N 29.426 15.036 20.256 -5.071 0.363  -1.603 HBA  MJS 61 
0ZY HG   HG   H 0 1 N N N N N N 29.916 13.401 18.398 -6.543 0.406  0.431  HG   MJS 62 
0ZY HGA  HGA  H 0 1 N N N N N N 28.160 13.377 17.992 -5.631 1.817  1.021  HGA  MJS 63 
0ZY HD   HD   H 0 1 N N N N N N 28.328 15.906 17.719 -6.247 3.071  -1.028 HD   MJS 64 
0ZY HDA  HDA  H 0 1 N N N N N N 30.125 15.684 17.793 -7.158 1.661  -1.618 HDA  MJS 65 
0ZY HE   HE   H 0 1 N N N N N N 30.016 14.160 15.866 -8.630 1.778  0.375  HE   MJS 66 
0ZY HEA  HEA  H 0 1 N N N N N N 28.230 14.389 15.786 -7.718 3.189  0.965  HEA  MJS 67 
0ZY H2   H2   H 0 1 N N N N N N 29.359 12.352 24.274 -5.249 0.059  2.416  H    MJS 68 
0ZY HC   HC   H 0 1 N N N N N N 30.255 13.657 25.123 -5.260 -1.239 3.634  HC   MJS 69 
0ZY HF   HF   H 0 1 N N N N N N 28.463 13.586 25.223 -3.759 -0.853 2.757  HF   MJS 70 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
0ZY O1   C    DOUB N N 1  
0ZY C    O2   SING N N 2  
0ZY C    N    SING N N 3  
0ZY O2   CT   SING N N 4  
0ZY CT   C1   SING N N 5  
0ZY CT   C2   SING N N 6  
0ZY CT   C3   SING N N 7  
0ZY C1   H11  SING N N 8  
0ZY C1   H12  SING N N 9  
0ZY C1   H13  SING N N 10 
0ZY C2   H21  SING N N 11 
0ZY C2   H22  SING N N 12 
0ZY C2   H23  SING N N 13 
0ZY C3   H31  SING N N 14 
0ZY C3   H32  SING N N 15 
0ZY C3   H33  SING N N 16 
0ZY N    CA   SING N N 17 
0ZY N    H    SING N N 18 
0ZY CA   C4   SING N N 19 
0ZY CA   CB   SING N N 20 
0ZY CA   HA   SING N N 21 
0ZY C4   O    DOUB N N 22 
0ZY C4   N1   SING N N 23 
0ZY CB   HB1  SING N N 24 
0ZY CB   HB2  SING N N 25 
0ZY CB   HB3  SING N N 26 
0ZY N1   CA1  SING N N 27 
0ZY N1   H1   SING N N 28 
0ZY CA1  C5   SING N N 29 
0ZY CA1  CB1  SING N N 30 
0ZY CA1  HA1  SING N N 31 
0ZY C5   O3   DOUB N N 32 
0ZY C5   N2   SING N N 33 
0ZY CB1  CG1  SING N N 34 
0ZY CB1  CG2  SING N N 35 
0ZY CB1  HB   SING N N 36 
0ZY CG1  HG11 SING N N 37 
0ZY CG1  HG12 SING N N 38 
0ZY CG1  HG13 SING N N 39 
0ZY CG2  HG21 SING N N 40 
0ZY CG2  HG22 SING N N 41 
0ZY CG2  HG23 SING N N 42 
0ZY N2   CA2  SING N N 43 
0ZY CA2  B    SING N N 44 
0ZY CA2  HA2  SING N N 45 
0ZY CB2  CA2  SING N N 46 
0ZY CB2  HB4  SING N N 47 
0ZY CB2  HBA  SING N N 48 
0ZY CG   CB2  SING N N 49 
0ZY CG   HG   SING N N 50 
0ZY CG   HGA  SING N N 51 
0ZY CD   CG   SING N N 52 
0ZY CD   HD   SING N N 53 
0ZY CD   HDA  SING N N 54 
0ZY CE   CD   SING N N 55 
0ZY CE   HE   SING N N 56 
0ZY CE   HEA  SING N N 57 
0ZY NZ   CE   SING N N 58 
0ZY NZ   HNZA SING N N 59 
0ZY NZ   HNZ  SING N N 60 
0ZY B    O4   SING N N 61 
0ZY B    O21  SING N N 62 
0ZY O21  C6   SING N N 63 
0ZY C6   H2   SING N N 64 
0ZY C6   HC   SING N N 65 
0ZY C6   HF   SING N N 66 
0ZY HN   N2   SING N N 67 
0ZY HNZB NZ   SING N N 68 
0ZY HO   O4   SING N N 69 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
0ZY SMILES           ACDLabs              10.04 "O=C(NC(B(O)OC)CCCC[NH3+])C(NC(=O)C(NC(=O)OC(C)(C)C)C)C(C)C"                                                                                                                           
0ZY SMILES_CANONICAL CACTVS               3.341 "COB(O)[C@H](CCCC[NH3+])NC(=O)[C@@H](NC(=O)[C@H](C)NC(=O)OC(C)(C)C)C(C)C"                                                                                                              
0ZY SMILES           CACTVS               3.341 "COB(O)[CH](CCCC[NH3+])NC(=O)[CH](NC(=O)[CH](C)NC(=O)OC(C)(C)C)C(C)C"                                                                                                                  
0ZY SMILES_CANONICAL "OpenEye OEToolkits" 1.5.0 "B([C@H](CCCC[NH3+])NC(=O)[C@H](C(C)C)NC(=O)[C@H](C)NC(=O)OC(C)(C)C)(O)OC"                                                                                                             
0ZY SMILES           "OpenEye OEToolkits" 1.5.0 "B(C(CCCC[NH3+])NC(=O)C(C(C)C)NC(=O)C(C)NC(=O)OC(C)(C)C)(O)OC"                                                                                                                         
0ZY InChI            InChI                1.03  "InChI=1S/C19H39BN4O6/c1-12(2)15(17(26)23-14(20(28)29-7)10-8-9-11-21)24-16(25)13(3)22-18(27)30-19(4,5)6/h12-15,28H,8-11,21H2,1-7H3,(H,22,27)(H,23,26)(H,24,25)/p+1/t13-,14-,15-/m0/s1" 
0ZY InChIKey         InChI                1.03  OTTITSSTTJGNLR-KKUMJFAQSA-O                                                                                                                                                            
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
0ZY "SYSTEMATIC NAME" ACDLabs              10.04 "N-(tert-butoxycarbonyl)-L-alanyl-N-{(1R)-5-ammonio-1-[hydroxy(methoxy)boranyl]pentyl}-L-valinamide"                                                  
0ZY "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.5.0 "[(5R)-5-(hydroxy-methoxy-boranyl)-5-[[(2S)-3-methyl-2-[[(2S)-2-[(2-methylpropan-2-yl)oxycarbonylamino]propanoyl]amino]butanoyl]amino]pentyl]azanium" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
0ZY "Create component"  2008-08-19 RCSB 
0ZY "Modify descriptor" 2011-06-04 RCSB 
0ZY "Modify PCM"        2024-09-27 PDBE 
# 
_pdbx_chem_comp_pcm.pcm_id                             1 
_pdbx_chem_comp_pcm.comp_id                            0ZY 
_pdbx_chem_comp_pcm.modified_residue_id                SER 
_pdbx_chem_comp_pcm.type                               None 
_pdbx_chem_comp_pcm.category                           "Covalent chemical modification" 
_pdbx_chem_comp_pcm.position                           "Amino-acid side chain" 
_pdbx_chem_comp_pcm.polypeptide_position               "Any position" 
_pdbx_chem_comp_pcm.comp_id_linking_atom               B 
_pdbx_chem_comp_pcm.modified_residue_id_linking_atom   OG 
_pdbx_chem_comp_pcm.uniprot_specific_ptm_accession     ? 
_pdbx_chem_comp_pcm.uniprot_generic_ptm_accession      ? 
# 
