data_YLX
# 
_chem_comp.id                                    YLX 
_chem_comp.name                                  Buspirone 
_chem_comp.type                                  non-polymer 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C21 H31 N5 O2" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         Buspirone 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2023-02-09 
_chem_comp.pdbx_modified_date                    2024-05-10 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        385.503 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     YLX 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        8FYX 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  RCSB 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.pdbx_backbone_atom_flag 
_chem_comp_atom.pdbx_n_terminal_atom_flag 
_chem_comp_atom.pdbx_c_terminal_atom_flag 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
YLX C1  C1  C 0 1 N N N N N N 137.100 127.130 167.889 5.628   1.388  0.695  C1  YLX 1  
YLX C2  C2  C 0 1 N N N N N N 138.386 127.780 167.337 6.120   0.041  0.170  C2  YLX 2  
YLX C3  C3  C 0 1 N N N N N N 139.484 126.702 167.173 7.631   -0.098 0.403  C3  YLX 3  
YLX C4  C4  C 0 1 N N N N N N 139.061 125.936 165.920 7.821   -1.329 1.315  C4  YLX 4  
YLX N   N1  N 0 1 N N N N N N 136.382 129.375 168.570 3.626   0.945  -0.707 N   YLX 5  
YLX C   C5  C 0 1 N N N N N N 136.042 128.196 167.933 4.166   1.544  0.365  C   YLX 6  
YLX O   O1  O 0 1 N N N N N N 134.945 128.060 167.409 3.464   2.225  1.081  O   YLX 7  
YLX C10 C6  C 0 1 N N N N N N 135.160 131.456 167.887 1.384   0.071  -0.270 C10 YLX 8  
YLX C11 C7  C 0 1 N N N N N N 135.615 132.814 168.453 -0.103  0.286  -0.558 C11 YLX 9  
YLX C12 C8  C 0 1 N N N N N N 135.714 133.912 167.397 -0.922  -0.794 0.154  C12 YLX 10 
YLX C13 C9  C 0 1 N N N N N N 136.251 134.272 165.003 -3.147  -1.732 0.342  C13 YLX 11 
YLX C14 C10 C 0 1 N N N N N N 137.439 135.015 164.393 -4.614  -1.514 -0.034 C14 YLX 12 
YLX C15 C11 C 0 1 Y N N N N N 138.688 137.064 164.980 -6.437  -0.068 0.310  C15 YLX 13 
YLX C16 C12 C 0 1 Y N N N N N 139.647 138.272 163.327 -8.382  -0.817 -0.666 C16 YLX 14 
YLX C17 C13 C 0 1 Y N N N N N 140.244 139.100 164.247 -9.040  0.308  -0.192 C17 YLX 15 
YLX C18 C14 C 0 1 Y N N N N N 139.947 138.850 165.562 -8.322  1.231  0.552  C18 YLX 16 
YLX C19 C15 C 0 1 N N N N N N 138.414 135.271 166.612 -4.295  0.881  0.106  C19 YLX 17 
YLX C20 C16 C 0 1 N N N N N N 138.045 133.795 166.610 -2.827  0.664  0.482  C20 YLX 18 
YLX C5  C17 C 0 1 N N N N N N 138.426 127.048 164.976 6.547   -2.178 1.078  C5  YLX 19 
YLX C6  C18 C 0 1 N N N N N N 138.241 128.297 165.876 5.439   -1.104 0.940  C6  YLX 20 
YLX C7  C19 C 0 1 N N N N N N 138.799 128.893 168.324 5.806   -0.075 -1.321 C7  YLX 21 
YLX C8  C20 C 0 1 N N N N N N 137.693 129.739 168.895 4.334   0.164  -1.537 C8  YLX 22 
YLX C9  C21 C 0 1 N N N N N N 135.294 130.315 168.906 2.202   1.150  -0.982 C9  YLX 23 
YLX N1  N2  N 0 1 N N N N N N 136.618 133.598 166.274 -2.350  -0.587 -0.123 N1  YLX 24 
YLX N2  N3  N 0 1 N N N N N N 138.034 135.939 165.364 -5.092  -0.263 0.571  N2  YLX 25 
YLX N3  N4  N 0 1 Y N N N N N 138.870 137.238 163.665 -7.096  -0.972 -0.399 N3  YLX 26 
YLX N4  N5  N 0 1 Y N N N N N 139.168 137.841 165.960 -7.037  1.015  0.782  N4  YLX 27 
YLX O1  O2  O 0 1 N N N N N N 137.916 130.691 169.630 3.778   -0.359 -2.478 O1  YLX 28 
YLX H1  H1  H 0 1 N N N N N N 136.780 126.310 167.230 5.763   1.429  1.776  H1  YLX 29 
YLX H2  H2  H 0 1 N N N N N N 137.281 126.738 168.901 6.195   2.193  0.226  H2  YLX 30 
YLX H3  H3  H 0 1 N N N N N N 139.513 126.036 168.048 8.144   -0.253 -0.546 H3  YLX 31 
YLX H4  H4  H 0 1 N N N N N N 140.471 127.167 167.033 8.017   0.795  0.894  H4  YLX 32 
YLX H5  H5  H 0 1 N N N N N N 138.318 125.164 166.168 8.711   -1.886 1.024  H5  YLX 33 
YLX H6  H6  H 0 1 N N N N N N 139.931 125.466 165.438 7.889   -1.023 2.359  H6  YLX 34 
YLX H7  H7  H 0 1 N N N N N N 134.105 131.536 167.585 1.559   0.131  0.804  H7  YLX 35 
YLX H8  H8  H 0 1 N N N N N N 135.776 131.217 167.008 1.686   -0.912 -0.633 H8  YLX 36 
YLX H9  H9  H 0 1 N N N N N N 136.605 132.685 168.915 -0.405  1.268  -0.195 H9  YLX 37 
YLX H10 H10 H 0 1 N N N N N N 134.892 133.132 169.219 -0.278  0.225  -1.632 H10 YLX 38 
YLX H11 H11 H 0 1 N N N N N N 136.078 134.828 167.886 -0.620  -1.776 -0.209 H11 YLX 39 
YLX H12 H12 H 0 1 N N N N N N 134.708 134.089 166.989 -0.747  -0.734 1.228  H12 YLX 40 
YLX H13 H13 H 0 1 N N N N N N 135.444 134.993 165.202 -3.058  -1.820 1.425  H13 YLX 41 
YLX H14 H14 H 0 1 N N N N N N 135.898 133.515 164.287 -2.782  -2.644 -0.129 H14 YLX 42 
YLX H15 H15 H 0 1 N N N N N N 138.199 134.284 164.080 -4.706  -1.452 -1.118 H15 YLX 43 
YLX H16 H16 H 0 1 N N N N N N 137.096 135.585 163.517 -5.212  -2.348 0.335  H16 YLX 44 
YLX H17 H17 H 0 1 N N N N N N 139.814 138.466 162.278 -8.914  -1.557 -1.245 H17 YLX 45 
YLX H18 H18 H 0 1 N N N N N N 140.907 139.900 163.952 -10.089 0.460  -0.395 H18 YLX 46 
YLX H19 H19 H 0 1 N N N N N N 140.364 139.503 166.315 -8.804  2.118  0.935  H19 YLX 47 
YLX H20 H20 H 0 1 N N N N N N 139.502 135.364 166.746 -4.660  1.794  0.577  H20 YLX 48 
YLX H21 H21 H 0 1 N N N N N N 137.898 135.764 167.449 -4.383  0.971  -0.977 H21 YLX 49 
YLX H22 H22 H 0 1 N N N N N N 138.239 133.376 167.608 -2.230  1.497  0.113  H22 YLX 50 
YLX H23 H23 H 0 1 N N N N N N 138.664 133.272 165.866 -2.735  0.603  1.566  H23 YLX 51 
YLX H24 H24 H 0 1 N N N N N N 137.456 126.710 164.583 6.637   -2.760 0.161  H24 YLX 52 
YLX H25 H25 H 0 1 N N N N N N 139.103 127.274 164.139 6.351   -2.827 1.931  H25 YLX 53 
YLX H26 H26 H 0 1 N N N N N N 139.014 129.048 165.655 5.114   -0.762 1.923  H26 YLX 54 
YLX H27 H27 H 0 1 N N N N N N 137.246 128.739 165.721 4.595   -1.496 0.372  H27 YLX 55 
YLX H28 H28 H 0 1 N N N N N N 139.320 128.414 169.166 6.380   0.669  -1.873 H28 YLX 56 
YLX H29 H29 H 0 1 N N N N N N 139.493 129.564 167.797 6.068   -1.073 -1.672 H29 YLX 57 
YLX H30 H30 H 0 1 N N N N N N 135.498 130.749 169.896 1.900   2.133  -0.619 H30 YLX 58 
YLX H31 H31 H 0 1 N N N N N N 134.346 129.759 168.938 2.027   1.090  -2.056 H31 YLX 59 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
YLX C16 N3  DOUB Y N 1  
YLX C16 C17 SING Y N 2  
YLX N3  C15 SING Y N 3  
YLX C17 C18 DOUB Y N 4  
YLX C14 C13 SING N N 5  
YLX C14 N2  SING N N 6  
YLX C5  C6  SING N N 7  
YLX C5  C4  SING N N 8  
YLX C15 N2  SING N N 9  
YLX C15 N4  DOUB Y N 10 
YLX C13 N1  SING N N 11 
YLX N2  C19 SING N N 12 
YLX C18 N4  SING Y N 13 
YLX C6  C2  SING N N 14 
YLX C4  C3  SING N N 15 
YLX N1  C20 SING N N 16 
YLX N1  C12 SING N N 17 
YLX C20 C19 SING N N 18 
YLX C3  C2  SING N N 19 
YLX C2  C1  SING N N 20 
YLX C2  C7  SING N N 21 
YLX C12 C11 SING N N 22 
YLX O   C   DOUB N N 23 
YLX C10 C11 SING N N 24 
YLX C10 C9  SING N N 25 
YLX C1  C   SING N N 26 
YLX C   N   SING N N 27 
YLX C7  C8  SING N N 28 
YLX N   C8  SING N N 29 
YLX N   C9  SING N N 30 
YLX C8  O1  DOUB N N 31 
YLX C1  H1  SING N N 32 
YLX C1  H2  SING N N 33 
YLX C3  H3  SING N N 34 
YLX C3  H4  SING N N 35 
YLX C4  H5  SING N N 36 
YLX C4  H6  SING N N 37 
YLX C10 H7  SING N N 38 
YLX C10 H8  SING N N 39 
YLX C11 H9  SING N N 40 
YLX C11 H10 SING N N 41 
YLX C12 H11 SING N N 42 
YLX C12 H12 SING N N 43 
YLX C13 H13 SING N N 44 
YLX C13 H14 SING N N 45 
YLX C14 H15 SING N N 46 
YLX C14 H16 SING N N 47 
YLX C16 H17 SING N N 48 
YLX C17 H18 SING N N 49 
YLX C18 H19 SING N N 50 
YLX C19 H20 SING N N 51 
YLX C19 H21 SING N N 52 
YLX C20 H22 SING N N 53 
YLX C20 H23 SING N N 54 
YLX C5  H24 SING N N 55 
YLX C5  H25 SING N N 56 
YLX C6  H26 SING N N 57 
YLX C6  H27 SING N N 58 
YLX C7  H28 SING N N 59 
YLX C7  H29 SING N N 60 
YLX C9  H30 SING N N 61 
YLX C9  H31 SING N N 62 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
YLX SMILES           ACDLabs              12.01 "O=C1CC2(CCCC2)CC(=O)N1CCCCN1CCN(CC1)c1ncccn1"                                                                                        
YLX InChI            InChI                1.06  "InChI=1S/C21H31N5O2/c27-18-16-21(6-1-2-7-21)17-19(28)26(18)11-4-3-10-24-12-14-25(15-13-24)20-22-8-5-9-23-20/h5,8-9H,1-4,6-7,10-17H2" 
YLX InChIKey         InChI                1.06  QWCRAEMEVRGPNT-UHFFFAOYSA-N                                                                                                           
YLX SMILES_CANONICAL CACTVS               3.385 "O=C1CC2(CCCC2)CC(=O)N1CCCCN3CCN(CC3)c4ncccn4"                                                                                        
YLX SMILES           CACTVS               3.385 "O=C1CC2(CCCC2)CC(=O)N1CCCCN3CCN(CC3)c4ncccn4"                                                                                        
YLX SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "c1cnc(nc1)N2CCN(CC2)CCCCN3C(=O)CC4(CCCC4)CC3=O"                                                                                      
YLX SMILES           "OpenEye OEToolkits" 2.0.7 "c1cnc(nc1)N2CCN(CC2)CCCCN3C(=O)CC4(CCCC4)CC3=O"                                                                                      
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
YLX "SYSTEMATIC NAME" ACDLabs              12.01 "8-{4-[4-(pyrimidin-2-yl)piperazin-1-yl]butyl}-8-azaspiro[4.5]decane-7,9-dione" 
YLX "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 "8-[4-(4-pyrimidin-2-ylpiperazin-1-yl)butyl]-8-azaspiro[4.5]decane-7,9-dione"   
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
YLX "Create component" 2023-02-09 RCSB 
YLX "Modify name"      2024-03-15 RCSB 
YLX "Initial release"  2024-05-15 RCSB 
# 
