data_X6X
#

_chem_comp.id                                   X6X
_chem_comp.name                                 2-amino-2-deoxy-alpha-D-galactopyranose
_chem_comp.type                                 "D-saccharide, alpha linking"
_chem_comp.pdbx_type                            ATOMS
_chem_comp.formula                              "C6 H13 N O5"
_chem_comp.mon_nstd_parent_comp_id              ?
_chem_comp.pdbx_synonyms                        "alpha-D-galactosamine; 2-amino-2-deoxy-alpha-D-galactose; 2-amino-2-deoxy-D-galactose; 2-amino-2-deoxy-galactose"
_chem_comp.pdbx_formal_charge                   0
_chem_comp.pdbx_initial_date                    2015-06-03
_chem_comp.pdbx_modified_date                   2020-07-17
_chem_comp.pdbx_ambiguous_flag                  N
_chem_comp.pdbx_release_status                  REL
_chem_comp.pdbx_replaced_by                     ?
_chem_comp.pdbx_replaces                        ?
_chem_comp.formula_weight                       179.171
_chem_comp.one_letter_code                      ?
_chem_comp.three_letter_code                    X6X
_chem_comp.pdbx_model_coordinates_details       ?
_chem_comp.pdbx_model_coordinates_missing_flag  N
_chem_comp.pdbx_ideal_coordinates_details       Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag  N
_chem_comp.pdbx_model_coordinates_db_code       5BR1
_chem_comp.pdbx_subcomponent_list               ?
_chem_comp.pdbx_processing_site                 RCSB
#   #
loop_
_pdbx_chem_comp_synonyms.ordinal
_pdbx_chem_comp_synonyms.comp_id
_pdbx_chem_comp_synonyms.name
_pdbx_chem_comp_synonyms.provenance
_pdbx_chem_comp_synonyms.type
1  X6X  alpha-D-galactosamine              PDB  ?  
2  X6X  2-amino-2-deoxy-alpha-D-galactose  PDB  ?  
3  X6X  2-amino-2-deoxy-D-galactose        PDB  ?  
4  X6X  2-amino-2-deoxy-galactose          PDB  ?  
#   #
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
X6X  O4    O4   O  0  1  N  N  N   -9.792   0.908  13.782  -0.263   1.924  -0.858  O4    X6X   1  
X6X  C4    C4   C  0  1  N  N  R   -8.636   1.049  12.990  -0.203   1.219   0.383  C4    X6X   2  
X6X  C3    C3   C  0  1  N  N  R   -8.160  -0.363  12.608   1.213   0.674   0.595  C3    X6X   3  
X6X  O3    O3   O  0  1  N  N  N   -9.290  -1.069  11.952   2.152   1.750   0.548  O3    X6X   4  
X6X  C2    C2   C  0  1  N  N  R   -7.660  -1.130  13.873   1.532  -0.332  -0.516  C2    X6X   5  
X6X  N2    N2   N  0  1  N  N  N   -7.081  -2.442  13.514   2.859  -0.917  -0.282  N2    X6X   6  
X6X  C1    C1   C  0  1  N  N  S   -6.579  -0.286  14.658   0.476  -1.440  -0.508  C1    X6X   7  
X6X  O1    O1   O  0  1  N  Y  N   -5.462  -0.097  13.879   0.527  -2.139   0.737  O1    X6X   8  
X6X  O5    O    O  0  1  N  N  N   -7.080   1.010  14.930  -0.820  -0.863  -0.678  O5    X6X   9  
X6X  C5    C5   C  0  1  N  N  R   -7.562   1.797  13.813  -1.192   0.051   0.356  C5    X6X  10  
X6X  C6    C6   C  0  1  N  N  N   -8.239   2.988  14.518  -2.601   0.582   0.085  C6    X6X  11  
X6X  O6    O6   O  0  1  N  N  N   -8.331   4.074  13.602  -3.540  -0.492   0.175  O6    X6X  12  
X6X  HO4   H1   H  0  1  N  Y  N  -10.110   1.767  14.034  -1.134   2.293  -1.059  HO4   X6X  13  
X6X  H4    H2   H  0  1  N  N  N   -8.851   1.619  12.074  -0.460   1.894   1.199  H4    X6X  14  
X6X  H3    H3   H  0  1  N  N  N   -7.323  -0.275  11.900   1.272   0.178   1.564  H3    X6X  15  
X6X  HO3   H4   H  0  1  N  Y  N   -9.017  -1.945  11.707   3.070   1.477   0.675  HO3   X6X  16  
X6X  H2    H5   H  0  1  N  N  N   -8.520  -1.285  14.542   1.521   0.175  -1.481  H2    X6X  17  
X6X  HN21  H6   H  0  0  N  N  N   -6.771  -2.908  14.343   3.092  -1.584  -1.002  HN21  X6X  18  
X6X  HN22  H7   H  0  0  N  Y  N   -7.775  -2.999  13.059   3.564  -0.199  -0.213  HN22  X6X  19  
X6X  H1    H9   H  0  1  N  N  N   -6.334  -0.814  15.592   0.673  -2.136  -1.324  H1    X6X  20  
X6X  HO1   H10  H  0  1  N  Y  N   -4.821   0.411  14.362  -0.117  -2.857   0.812  HO1   X6X  21  
X6X  H5    H11  H  0  1  N  N  N   -6.744   2.141  13.164  -1.175  -0.463   1.317  H5    X6X  22  
X6X  H61   H12  H  0  1  N  N  N   -7.640   3.290  15.390  -2.850   1.344   0.823  H61   X6X  23  
X6X  H62   H13  H  0  1  N  N  N   -9.247   2.697  14.848  -2.640   1.016  -0.914  H62   X6X  24  
X6X  HO6   H14  H  0  1  N  Y  N   -8.748   4.814  14.028  -4.456  -0.228   0.014  HO6   X6X  25  
#   #
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
X6X  O3  C3    SING  N  N   1  
X6X  C3  C4    SING  N  N   2  
X6X  C3  C2    SING  N  N   3  
X6X  C4  O4    SING  N  N   4  
X6X  C4  C5    SING  N  N   5  
X6X  N2  C2    SING  N  N   6  
X6X  O6  C6    SING  N  N   7  
X6X  C5  C6    SING  N  N   8  
X6X  C5  O5    SING  N  N   9  
X6X  C2  C1    SING  N  N  10  
X6X  O1  C1    SING  N  N  11  
X6X  C1  O5    SING  N  N  12  
X6X  O4  HO4   SING  N  N  13  
X6X  C4  H4    SING  N  N  14  
X6X  C3  H3    SING  N  N  15  
X6X  O3  HO3   SING  N  N  16  
X6X  C2  H2    SING  N  N  17  
X6X  N2  HN21  SING  N  N  18  
X6X  N2  HN22  SING  N  N  19  
X6X  C1  H1    SING  N  N  20  
X6X  O1  HO1   SING  N  N  21  
X6X  C5  H5    SING  N  N  22  
X6X  C6  H61   SING  N  N  23  
X6X  C6  H62   SING  N  N  24  
X6X  O6  HO6   SING  N  N  25  
#   #
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
X6X  SMILES            ACDLabs               12.01  "OC1C(OC(C(C1O)N)O)CO"  
X6X  InChI             InChI                 1.03   "InChI=1S/C6H13NO5/c7-3-5(10)4(9)2(1-8)12-6(3)11/h2-6,8-11H,1,7H2/t2-,3-,4+,5-,6+/m1/s1"  
X6X  InChIKey          InChI                 1.03   MSWZFWKMSRAUBD-DVKNGEFBSA-N  
X6X  SMILES_CANONICAL  CACTVS                3.385  "N[C@H]1[C@@H](O)O[C@H](CO)[C@H](O)[C@@H]1O"  
X6X  SMILES            CACTVS                3.385  "N[CH]1[CH](O)O[CH](CO)[CH](O)[CH]1O"  
X6X  SMILES_CANONICAL  "OpenEye OEToolkits"  1.9.2  "C([C@@H]1[C@@H]([C@@H]([C@H]([C@H](O1)O)N)O)O)O"  
X6X  SMILES            "OpenEye OEToolkits"  1.9.2  "C(C1C(C(C(C(O1)O)N)O)O)O"  
#   #
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
X6X  "SYSTEMATIC NAME"                      ACDLabs               12.01  2-amino-2-deoxy-alpha-D-galactopyranose  
X6X  "SYSTEMATIC NAME"                      "OpenEye OEToolkits"  1.9.2  "(2S,3R,4R,5R,6R)-3-azanyl-6-(hydroxymethyl)oxane-2,4,5-triol"  
X6X  "CONDENSED IUPAC CARBOHYDRATE SYMBOL"  GMML                  1.0    DGalpNa  
X6X  "COMMON NAME"                          GMML                  1.0    a-D-galactopyranosamine  
X6X  "IUPAC CARBOHYDRATE SYMBOL"            PDB-CARE              1.0    a-D-GalpN  
X6X  "SNFG CARBOHYDRATE SYMBOL"             GMML                  1.0    GalN  
#   #
loop_
_pdbx_chem_comp_feature.comp_id
_pdbx_chem_comp_feature.type
_pdbx_chem_comp_feature.value
_pdbx_chem_comp_feature.source
_pdbx_chem_comp_feature.support
X6X  "CARBOHYDRATE ISOMER"                  D         PDB  ?  
X6X  "CARBOHYDRATE RING"                    pyranose  PDB  ?  
X6X  "CARBOHYDRATE ANOMER"                  alpha     PDB  ?  
X6X  "CARBOHYDRATE PRIMARY CARBONYL GROUP"  aldose    PDB  ?  
#   #
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
X6X  "Create component"          2015-06-03  RCSB  
X6X  "Initial release"           2015-06-10  RCSB  
X6X  "Other modification"        2019-08-12  RCSB  
X6X  "Other modification"        2019-12-19  RCSB  
X6X  "Other modification"        2020-07-03  RCSB  
X6X  "Modify synonyms"           2020-07-17  RCSB  
X6X  "Modify atom id"            2020-07-17  RCSB  
X6X  "Modify component atom id"  2020-07-17  RCSB  
##
