data_X4X
# 
_chem_comp.id                                    X4X 
_chem_comp.name                                  "(9R,10E,12Z)-9-hydroxy-N-(2-hydroxyethyl)octadeca-10,12-dienamide" 
_chem_comp.type                                  non-polymer 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C20 H37 N O3" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2022-10-27 
_chem_comp.pdbx_modified_date                    2024-05-24 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        339.513 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     X4X 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        8EY9 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  RCSB 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.pdbx_backbone_atom_flag 
_chem_comp_atom.pdbx_n_terminal_atom_flag 
_chem_comp_atom.pdbx_c_terminal_atom_flag 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
X4X C10 C1  C 0 1 N N N N N N -95.456 33.257 -34.822 -8.673  -1.873 -0.380 C10 X4X 1  
X4X C11 C2  C 0 1 N N N N N N -95.137 18.784 -40.179 7.016   -0.723 -0.003 C11 X4X 2  
X4X C12 C3  C 0 1 N N N N N N -95.015 30.834 -35.445 -7.213  -0.011 -1.182 C12 X4X 3  
X4X C13 C4  C 0 1 N N N N N N -94.874 33.421 -33.418 -10.010 -2.217 0.279  C13 X4X 4  
X4X C14 C5  C 0 1 N N N N N N -92.236 28.033 -36.829 -3.888  1.968  0.299  C14 X4X 5  
X4X C15 C6  C 0 1 N N N N N N -93.176 28.843 -36.387 -4.905  1.340  -0.282 C15 X4X 6  
X4X C16 C7  C 0 1 N N N N N N -94.040 30.162 -34.482 -7.092  1.485  -1.322 C16 X4X 7  
X4X C17 C8  C 0 1 N N N N N N -93.193 29.252 -34.916 -6.028  2.114  -0.835 C17 X4X 8  
X4X C18 C9  C 0 1 N N N N N N -93.348 33.466 -33.405 -10.133 -3.736 0.421  C18 X4X 9  
X4X C19 C10 C 0 1 N N N N N N -93.180 17.401 -39.360 9.358   -1.393 -0.022 C19 X4X 10 
X4X C20 C11 C 0 1 N N N N N N -92.859 15.945 -39.028 10.655  -0.982 -0.722 C20 X4X 11 
X4X C01 C12 C 0 1 N N N N N N -93.478 22.705 -38.377 2.148   0.220  0.435  C01 X4X 12 
X4X C02 C13 C 0 1 N N N N N N -93.981 24.145 -38.448 1.001   1.110  -0.050 C02 X4X 13 
X4X C03 C14 C 0 1 N N N N N N -94.618 21.690 -38.420 3.444   0.632  -0.265 C03 X4X 14 
X4X C04 C15 C 0 1 N N N N N N -92.866 25.163 -38.217 -0.295  0.698  0.650  C04 X4X 15 
X4X C05 C16 C 0 1 N N N N N N -94.980 21.294 -39.849 4.590   -0.258 0.220  C05 X4X 16 
X4X C06 C17 C 0 1 N N N N N N -93.314 26.587 -38.540 -1.442  1.587  0.166  C06 X4X 17 
X4X C07 C18 C 0 1 N N N N N N -94.260 20.027 -40.308 5.887   0.154  -0.480 C07 X4X 18 
X4X C08 C19 C 0 1 N N R N N N -92.214 27.618 -38.298 -2.738  1.176  0.866  C08 X4X 19 
X4X C09 C20 C 0 1 N N N N N N -94.652 32.296 -35.696 -8.550  -0.355 -0.523 C09 X4X 20 
X4X N01 N1  N 0 1 N N N N N N -94.582 17.525 -39.714 8.261   -0.541 -0.486 N01 X4X 21 
X4X O01 O1  O 0 1 N N N N N N -96.283 18.849 -40.462 6.805   -1.591 0.817  O01 X4X 22 
X4X O02 O2  O 0 1 N N N N N N -92.434 28.741 -39.104 -2.626  1.434  2.267  O02 X4X 23 
X4X O03 O3  O 0 1 N N N N N N -91.970 15.640 -37.990 11.011  0.344  -0.324 O03 X4X 24 
X4X H1  H1  H 0 1 N N N N N N -95.474 34.242 -35.311 -7.856  -2.247 0.238  H1  X4X 25 
X4X H2  H2  H 0 1 N N N N N N -96.483 32.873 -34.733 -8.624  -2.336 -1.366 H2  X4X 26 
X4X H3  H3  H 0 1 N N N N N N -96.027 30.788 -35.016 -7.164  -0.474 -2.167 H3  X4X 27 
X4X H4  H4  H 0 1 N N N N N N -94.998 30.294 -36.403 -6.396  -0.385 -0.564 H4  X4X 28 
X4X H5  H5  H 0 1 N N N N N N -95.256 34.359 -32.988 -10.059 -1.755 1.265  H5  X4X 29 
X4X H6  H6  H 0 1 N N N N N N -95.205 32.573 -32.800 -10.826 -1.843 -0.339 H6  X4X 30 
X4X H7  H7  H 0 1 N N N N N N -91.481 27.662 -36.152 -3.887  3.046  0.367  H7  X4X 31 
X4X H8  H8  H 0 1 N N N N N N -93.932 29.216 -37.062 -4.907  0.262  -0.350 H8  X4X 32 
X4X H9  H9  H 0 1 N N N N N N -94.045 30.435 -33.437 -7.870  2.045  -1.819 H9  X4X 33 
X4X H10 H10 H 0 1 N N N N N N -92.504 28.790 -34.225 -5.987  3.193  -0.845 H10 X4X 34 
X4X H11 H11 H 0 1 N N N N N N -92.993 33.585 -32.371 -11.085 -3.981 0.891  H11 X4X 35 
X4X H12 H12 H 0 1 N N N N N N -92.950 32.530 -33.824 -10.084 -4.198 -0.564 H12 X4X 36 
X4X H13 H13 H 0 1 N N N N N N -93.001 34.316 -34.011 -9.316  -4.110 1.039  H13 X4X 37 
X4X H14 H14 H 0 1 N N N N N N -92.559 17.728 -40.207 9.134   -2.434 -0.256 H14 X4X 38 
X4X H15 H15 H 0 1 N N N N N N -92.967 18.031 -38.484 9.476   -1.280 1.056  H15 X4X 39 
X4X H16 H16 H 0 1 N N N N N N -93.814 15.458 -38.780 11.453  -1.671 -0.445 H16 X4X 40 
X4X H17 H17 H 0 1 N N N N N N -92.445 15.495 -39.942 10.510  -1.010 -1.802 H17 X4X 41 
X4X H18 H18 H 0 1 N N N N N N -92.809 22.522 -39.231 2.265   0.333  1.513  H18 X4X 42 
X4X H19 H19 H 0 1 N N N N N N -92.920 22.571 -37.438 1.923   -0.821 0.202  H19 X4X 43 
X4X H20 H20 H 0 1 N N N N N N -94.417 24.318 -39.443 1.225   2.150  0.184  H20 X4X 44 
X4X H21 H21 H 0 1 N N N N N N -94.754 24.287 -37.679 0.884   0.996  -1.128 H21 X4X 45 
X4X H22 H22 H 0 1 N N N N N N -95.504 22.131 -37.939 3.327   0.518  -1.343 H22 X4X 46 
X4X H23 H23 H 0 1 N N N N N N -94.312 20.789 -37.869 3.668   1.672  -0.031 H23 X4X 47 
X4X H24 H24 H 0 1 N N N N N N -92.011 24.905 -38.860 -0.520  -0.343 0.417  H24 X4X 48 
X4X H25 H25 H 0 1 N N N N N N -92.558 25.119 -37.162 -0.178  0.811  1.728  H25 X4X 49 
X4X H26 H26 H 0 1 N N N N N N -94.706 22.119 -40.523 4.707   -0.145 1.298  H26 X4X 50 
X4X H27 H27 H 0 1 N N N N N N -96.065 21.122 -39.903 4.366   -1.299 -0.014 H27 X4X 51 
X4X H28 H28 H 0 1 N N N N N N -94.177 26.837 -37.906 -1.217  2.628  0.399  H28 X4X 52 
X4X H29 H29 H 0 1 N N N N N N -93.612 26.631 -39.598 -1.559  1.474  -0.912 H29 X4X 53 
X4X H30 H30 H 0 1 N N N N N N -93.359 19.890 -39.693 6.111   1.194  -0.247 H30 X4X 54 
X4X H31 H31 H 0 1 N N N N N N -93.969 20.147 -41.362 5.770   0.040  -1.558 H31 X4X 55 
X4X H32 H32 H 0 1 N N N N N N -91.240 27.161 -38.525 -2.916  0.112  0.705  H32 X4X 56 
X4X H33 H33 H 0 1 N N N N N N -93.582 32.436 -35.482 -9.366  0.019  -1.141 H33 X4X 57 
X4X H34 H34 H 0 1 N N N N N N -94.848 32.532 -36.752 -8.599  0.108  0.463  H34 X4X 58 
X4X H35 H35 H 0 1 N N N N N N -95.179 16.726 -39.636 8.430   0.153  -1.142 H35 X4X 59 
X4X H36 H36 H 0 1 N N N N N N -91.748 29.380 -38.951 -2.467  2.362  2.484  H36 X4X 60 
X4X H37 H37 H 0 1 N N N N N N -91.881 14.697 -37.915 11.825  0.671  -0.730 H37 X4X 61 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
X4X O01 C11 DOUB N N 1  
X4X C07 C11 SING N N 2  
X4X C07 C05 SING N N 3  
X4X C11 N01 SING N N 4  
X4X C05 C03 SING N N 5  
X4X N01 C19 SING N N 6  
X4X C19 C20 SING N N 7  
X4X O02 C08 SING N N 8  
X4X C20 O03 SING N N 9  
X4X C06 C08 SING N N 10 
X4X C06 C04 SING N N 11 
X4X C02 C01 SING N N 12 
X4X C02 C04 SING N N 13 
X4X C03 C01 SING N N 14 
X4X C08 C14 SING N N 15 
X4X C14 C15 DOUB N E 16 
X4X C15 C17 SING N N 17 
X4X C09 C12 SING N N 18 
X4X C09 C10 SING N N 19 
X4X C12 C16 SING N N 20 
X4X C17 C16 DOUB N Z 21 
X4X C10 C13 SING N N 22 
X4X C13 C18 SING N N 23 
X4X C10 H1  SING N N 24 
X4X C10 H2  SING N N 25 
X4X C12 H3  SING N N 26 
X4X C12 H4  SING N N 27 
X4X C13 H5  SING N N 28 
X4X C13 H6  SING N N 29 
X4X C14 H7  SING N N 30 
X4X C15 H8  SING N N 31 
X4X C16 H9  SING N N 32 
X4X C17 H10 SING N N 33 
X4X C18 H11 SING N N 34 
X4X C18 H12 SING N N 35 
X4X C18 H13 SING N N 36 
X4X C19 H14 SING N N 37 
X4X C19 H15 SING N N 38 
X4X C20 H16 SING N N 39 
X4X C20 H17 SING N N 40 
X4X C01 H18 SING N N 41 
X4X C01 H19 SING N N 42 
X4X C02 H20 SING N N 43 
X4X C02 H21 SING N N 44 
X4X C03 H22 SING N N 45 
X4X C03 H23 SING N N 46 
X4X C04 H24 SING N N 47 
X4X C04 H25 SING N N 48 
X4X C05 H26 SING N N 49 
X4X C05 H27 SING N N 50 
X4X C06 H28 SING N N 51 
X4X C06 H29 SING N N 52 
X4X C07 H30 SING N N 53 
X4X C07 H31 SING N N 54 
X4X C08 H32 SING N N 55 
X4X C09 H33 SING N N 56 
X4X C09 H34 SING N N 57 
X4X N01 H35 SING N N 58 
X4X O02 H36 SING N N 59 
X4X O03 H37 SING N N 60 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
X4X SMILES           ACDLabs              12.01 "OCCNC(=O)CCCCCCCC(O)\C=C\C=C/CCCCC"                                                                                                                                     
X4X InChI            InChI                1.06  "InChI=1S/C20H37NO3/c1-2-3-4-5-6-8-11-14-19(23)15-12-9-7-10-13-16-20(24)21-17-18-22/h6,8,11,14,19,22-23H,2-5,7,9-10,12-13,15-18H2,1H3,(H,21,24)/b8-6-,14-11+/t19-/m0/s1" 
X4X InChIKey         InChI                1.06  VYCHZJQSKAOAAT-HGKNAVPSSA-N                                                                                                                                              
X4X SMILES_CANONICAL CACTVS               3.385 "CCCCC\C=C/C=C/[C@H](O)CCCCCCCC(=O)NCCO"                                                                                                                                 
X4X SMILES           CACTVS               3.385 "CCCCCC=CC=C[CH](O)CCCCCCCC(=O)NCCO"                                                                                                                                     
X4X SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "CCCCC/C=C\C=C\[C@@H](CCCCCCCC(=O)NCCO)O"                                                                                                                                
X4X SMILES           "OpenEye OEToolkits" 2.0.7 "CCCCCC=CC=CC(CCCCCCCC(=O)NCCO)O"                                                                                                                                        
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
X4X "SYSTEMATIC NAME" ACDLabs              12.01 "(9R,10E,12Z)-9-hydroxy-N-(2-hydroxyethyl)octadeca-10,12-dienamide"               
X4X "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 "(9~{R},10~{E},12~{Z})-~{N}-(2-hydroxyethyl)-9-oxidanyl-octadeca-10,12-dienamide" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
X4X "Create component" 2022-10-27 RCSB 
X4X "Initial release"  2024-05-29 RCSB 
# 
