data_W5X
# 
_chem_comp.id                                    W5X 
_chem_comp.name                                  PF-3463275 
_chem_comp.type                                  non-polymer 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C19 H22 Cl F N4 O" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         "~{N}-[(3-chloranyl-4-fluoranyl-phenyl)methyl]-1-methyl-~{N}-[[(1~{R},5~{S})-3-methyl-3-azabicyclo[3.1.0]hexan-6-yl]methyl]imidazole-4-carboxamide" 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2023-09-20 
_chem_comp.pdbx_modified_date                    2024-03-29 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        376.856 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     W5X 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        8WFL 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  PDBJ 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.pdbx_backbone_atom_flag 
_chem_comp_atom.pdbx_n_terminal_atom_flag 
_chem_comp_atom.pdbx_c_terminal_atom_flag 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
W5X C11  C1  C  0 1 N N N N N N 99.542  105.260 104.053 3.123  2.825  -0.116 C11  W5X 1  
W5X C12  C2  C  0 1 N N N N N N 98.733  104.216 105.910 0.963  3.507  0.491  C12  W5X 2  
W5X C13  C3  C  0 1 N N N N N N 100.814 106.883 106.870 1.484  0.622  1.059  C13  W5X 3  
W5X C14  C4  C  0 1 N N N N N N 97.526  104.512 104.407 2.360  5.038  -0.788 C14  W5X 4  
W5X C08  C5  C  0 1 N N R N N N 100.616 105.301 104.837 2.176  2.025  -1.036 C08  W5X 5  
W5X C09  C6  C  0 1 N N S N N N 100.247 104.458 106.018 0.755  2.474  -0.637 C09  W5X 6  
W5X C10  C7  C  0 1 N N N N N N 101.218 105.578 106.174 1.207  1.034  -0.388 C10  W5X 7  
W5X C15  C8  C  0 1 N N N N N N 99.229  106.805 108.817 -0.683 -0.078 2.179  C15  W5X 8  
W5X C16  C9  C  0 1 N N N N N N 101.499 106.201 109.322 0.804  -1.716 1.158  C16  W5X 9  
W5X C17  C10 C  0 1 Y N N N N N 98.600  108.173 108.557 -1.789 0.190  1.191  C17  W5X 10 
W5X C18  C11 C  0 1 Y N N N N N 102.980 105.911 109.177 1.975  -2.058 0.331  C18  W5X 11 
W5X C19  C12 C  0 1 Y N N N N N 97.113  108.104 108.484 -2.606 -0.844 0.772  C19  W5X 12 
W5X C20  C13 C  0 1 Y N N N N N 99.334  109.495 108.423 -1.989 1.469  0.708  C20  W5X 13 
W5X C21  C14 C  0 1 Y N N N N N 103.536 104.704 108.943 2.304  -3.300 -0.126 C21  W5X 14 
W5X C22  C15 C  0 1 Y N N N N N 96.327  109.345 108.266 -3.621 -0.600 -0.134 C22  W5X 15 
W5X C23  C16 C  0 1 Y N N N N N 98.556  110.783 108.187 -3.004 1.716  -0.198 C23  W5X 16 
W5X C24  C17 C  0 1 Y N N N N N 105.077 106.168 109.186 3.796  -1.853 -0.818 C24  W5X 17 
W5X C25  C18 C  0 1 Y N N N N N 97.035  110.698 108.110 -3.819 0.682  -0.623 C25  W5X 18 
W5X C26  C19 C  0 1 N N N N N N 105.850 103.897 108.706 4.170  -4.241 -1.523 C26  W5X 19 
W5X F02  F1  F  0 1 N N N N N N 96.316  111.837 107.908 -4.811 0.922  -1.508 F02  W5X 20 
W5X N04  N1  N  0 1 N N N N N N 98.331  105.036 105.007 2.339  4.025  0.276  N04  W5X 21 
W5X N05  N2  N  0 1 N N N N N N 100.562 106.643 108.295 0.543  -0.428 1.457  N05  W5X 22 
W5X N06  N3  N  0 1 Y N N N N N 103.914 106.792 109.345 2.918  -1.192 -0.121 N06  W5X 23 
W5X N07  N4  N  0 1 Y N N N N N 104.824 104.887 108.937 3.445  -3.165 -0.842 N07  W5X 24 
W5X O03  O1  O  0 1 N N N N N N 101.068 106.067 110.402 0.074  -2.596 1.572  O03  W5X 25 
W5X CL01 CL1 CL 0 0 N N N N N N 94.569  109.065 108.193 -4.647 -1.898 -0.661 CL01 W5X 26 
W5X H1   H1  H  0 1 N N N N N N 99.430  106.208 103.507 3.384  2.237  0.764  H1   W5X 27 
W5X H2   H2  H  0 1 N N N N N N 99.623  104.431 103.335 4.021  3.119  -0.659 H2   W5X 28 
W5X H3   H3  H  0 1 N N N N N N 98.238  104.425 106.870 0.236  4.315  0.406  H3   W5X 29 
W5X H4   H4  H  0 1 N N N N N N 98.527  103.178 105.609 0.884  3.027  1.467  H4   W5X 30 
W5X H5   H5  H  0 1 N N N N N N 101.626 107.617 106.764 2.504  0.245  1.141  H5   W5X 31 
W5X H6   H6  H  0 1 N N N N N N 99.900  107.276 106.401 1.363  1.485  1.713  H6   W5X 32 
W5X H7   H7  H  0 1 N N N N N N 96.649  104.334 105.046 1.927  4.620  -1.697 H7   W5X 33 
W5X H8   H8  H  0 1 N N N N N N 97.236  105.143 103.554 1.779  5.905  -0.475 H8   W5X 34 
W5X H9   H9  H  0 1 N N N N N N 97.912  103.550 104.038 3.389  5.341  -0.981 H9   W5X 35 
W5X H10  H10 H  0 1 N N N N N N 101.384 104.707 104.319 2.467  1.905  -2.080 H10  W5X 36 
W5X H11  H11 H  0 1 N N N N N N 100.779 103.496 105.978 -0.011 2.688  -1.382 H11  W5X 37 
W5X H12  H12 H  0 1 N N N N N N 102.272 105.288 106.297 0.783  0.257  -1.024 H12  W5X 38 
W5X H13  H13 H  0 1 N N N N N N 98.586  106.040 108.357 -0.508 0.815  2.779  H13  W5X 39 
W5X H14  H14 H  0 1 N N N N N N 99.266  106.647 109.905 -0.969 -0.903 2.830  H14  W5X 40 
W5X H15  H15 H  0 1 N N N N N N 96.609  107.155 108.589 -2.451 -1.843 1.153  H15  W5X 41 
W5X H16  H16 H  0 1 N N N N N N 100.411 109.522 108.495 -1.352 2.276  1.039  H16  W5X 42 
W5X H17  H17 H  0 1 N N N N N N 103.015 103.770 108.791 1.760  -4.216 0.051  H17  W5X 43 
W5X H18  H18 H  0 1 N N N N N N 99.066  111.729 108.077 -3.160 2.717  -0.574 H18  W5X 44 
W5X H19  H19 H  0 1 N N N N N N 106.055 106.622 109.248 4.662  -1.427 -1.303 H19  W5X 45 
W5X H20  H20 H  0 1 N N N N N N 106.840 104.373 108.768 3.796  -4.343 -2.542 H20  W5X 46 
W5X H21  H21 H  0 1 N N N N N N 105.775 103.107 109.467 5.234  -4.004 -1.548 H21  W5X 47 
W5X H22  H22 H  0 1 N N N N N N 105.717 103.457 107.707 4.019  -5.178 -0.985 H22  W5X 48 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
W5X C11  C08 SING N N 1  
W5X C11  N04 SING N N 2  
W5X C14  N04 SING N N 3  
W5X C08  C09 SING N N 4  
W5X C08  C10 SING N N 5  
W5X N04  C12 SING N N 6  
W5X C12  C09 SING N N 7  
W5X C09  C10 SING N N 8  
W5X C10  C13 SING N N 9  
W5X C13  N05 SING N N 10 
W5X F02  C25 SING N N 11 
W5X C25  C23 DOUB Y N 12 
W5X C25  C22 SING Y N 13 
W5X C23  C20 SING Y N 14 
W5X CL01 C22 SING N N 15 
W5X C22  C19 DOUB Y N 16 
W5X N05  C15 SING N N 17 
W5X N05  C16 SING N N 18 
W5X C20  C17 DOUB Y N 19 
W5X C19  C17 SING Y N 20 
W5X C17  C15 SING N N 21 
W5X C26  N07 SING N N 22 
W5X N07  C21 SING Y N 23 
W5X N07  C24 SING Y N 24 
W5X C21  C18 DOUB Y N 25 
W5X C18  C16 SING N N 26 
W5X C18  N06 SING Y N 27 
W5X C24  N06 DOUB Y N 28 
W5X C16  O03 DOUB N N 29 
W5X C11  H1  SING N N 30 
W5X C11  H2  SING N N 31 
W5X C12  H3  SING N N 32 
W5X C12  H4  SING N N 33 
W5X C13  H5  SING N N 34 
W5X C13  H6  SING N N 35 
W5X C14  H7  SING N N 36 
W5X C14  H8  SING N N 37 
W5X C14  H9  SING N N 38 
W5X C08  H10 SING N N 39 
W5X C09  H11 SING N N 40 
W5X C10  H12 SING N N 41 
W5X C15  H13 SING N N 42 
W5X C15  H14 SING N N 43 
W5X C19  H15 SING N N 44 
W5X C20  H16 SING N N 45 
W5X C21  H17 SING N N 46 
W5X C23  H18 SING N N 47 
W5X C24  H19 SING N N 48 
W5X C26  H20 SING N N 49 
W5X C26  H21 SING N N 50 
W5X C26  H22 SING N N 51 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
W5X InChI            InChI                1.06  "InChI=1S/C19H22ClFN4O/c1-23-7-13-14(8-23)15(13)9-25(19(26)18-10-24(2)11-22-18)6-12-3-4-17(21)16(20)5-12/h3-5,10-11,13-15H,6-9H2,1-2H3/t13-,14+,15-" 
W5X InChIKey         InChI                1.06  KYLOBHXXQOZRKK-QDMKHBRRSA-N                                                                                                                          
W5X SMILES_CANONICAL CACTVS               3.385 "CN1C[C@@H]2[C@H](C1)C2CN(Cc3ccc(F)c(Cl)c3)C(=O)c4cn(C)cn4"                                                                                          
W5X SMILES           CACTVS               3.385 "CN1C[CH]2[CH](C1)C2CN(Cc3ccc(F)c(Cl)c3)C(=O)c4cn(C)cn4"                                                                                             
W5X SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "Cn1cc(nc1)C(=O)N(Cc2ccc(c(c2)Cl)F)CC3[C@H]4[C@@H]3CN(C4)C"                                                                                          
W5X SMILES           "OpenEye OEToolkits" 2.0.7 "Cn1cc(nc1)C(=O)N(Cc2ccc(c(c2)Cl)F)CC3C4C3CN(C4)C"                                                                                                   
# 
_pdbx_chem_comp_identifier.comp_id           W5X 
_pdbx_chem_comp_identifier.type              "SYSTEMATIC NAME" 
_pdbx_chem_comp_identifier.program           "OpenEye OEToolkits" 
_pdbx_chem_comp_identifier.program_version   2.0.7 
_pdbx_chem_comp_identifier.identifier        "~{N}-[(3-chloranyl-4-fluoranyl-phenyl)methyl]-1-methyl-~{N}-[[(1~{R},5~{S})-3-methyl-3-azabicyclo[3.1.0]hexan-6-yl]methyl]imidazole-4-carboxamide" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
W5X "Create component" 2023-09-20 PDBJ 
W5X "Initial release"  2024-04-03 RCSB 
# 
_pdbx_chem_comp_synonyms.ordinal      1 
_pdbx_chem_comp_synonyms.comp_id      W5X 
_pdbx_chem_comp_synonyms.name         "~{N}-[(3-chloranyl-4-fluoranyl-phenyl)methyl]-1-methyl-~{N}-[[(1~{R},5~{S})-3-methyl-3-azabicyclo[3.1.0]hexan-6-yl]methyl]imidazole-4-carboxamide" 
_pdbx_chem_comp_synonyms.provenance   PDB 
_pdbx_chem_comp_synonyms.type         ? 
# 
