data_VJX
# 
_chem_comp.id                                    VJX 
_chem_comp.name                                  Rebamipide 
_chem_comp.type                                  non-polymer 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C19 H15 Cl N2 O4" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         "N-(4-chlorobenzoyl)-3-(2-oxo-1,2-dihydroquinolin-4-yl)-L-alanine" 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2023-09-13 
_chem_comp.pdbx_modified_date                    2024-02-02 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        370.786 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     VJX 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        8U5M 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  RCSB 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.pdbx_backbone_atom_flag 
_chem_comp_atom.pdbx_n_terminal_atom_flag 
_chem_comp_atom.pdbx_c_terminal_atom_flag 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
VJX C10  C1  C  0 1 N N N N N N -14.381 -3.399  22.872 2.264  -0.209 -0.970 C10  VJX 1  
VJX C13  C2  C  0 1 N N N N N N -14.908 -4.219  23.762 1.543  -1.202 -1.547 C13  VJX 2  
VJX C15  C3  C  0 1 N N N N N N -16.355 -4.611  23.848 1.777  -2.548 -1.193 C15  VJX 3  
VJX C17  C4  C  0 1 Y N N N N N -17.581 -2.616  20.895 4.435  -2.275 1.282  C17  VJX 4  
VJX C20  C5  C  0 1 Y N N N N N -17.121 -1.763  19.921 5.194  -1.293 1.881  C20  VJX 5  
VJX C21  C6  C  0 1 Y N N N N N -12.647 -7.994  22.734 -2.419 0.546  0.482  C21  VJX 6  
VJX C22  C7  C  0 1 Y N N N N N -12.198 -9.218  22.233 -2.794 -0.067 -0.715 C22  VJX 7  
VJX C24  C8  C  0 1 Y N N N N N -12.340 -10.443 22.926 -4.028 -0.675 -0.818 C24  VJX 8  
VJX C26  C9  C  0 1 Y N N N N N -12.955 -10.414 24.179 -4.894 -0.677 0.263  C26  VJX 9  
VJX CL01 CL1 CL 0 0 N N N N N N -13.145 -11.961 25.094 -6.445 -1.445 0.126  CL01 VJX 10 
VJX O02  O1  O  0 1 N N N N N N -10.244 -2.574  21.594 -0.178 3.787  -0.913 O02  VJX 11 
VJX O03  O2  O  0 1 N N N N N N -16.901 -5.333  24.631 1.117  -3.425 -1.724 O03  VJX 12 
VJX O04  O3  O  0 1 N N N N N N -9.723  -4.694  22.141 1.981  4.134  -0.591 O04  VJX 13 
VJX O05  O4  O  0 1 N N N N N N -12.436 -6.722  20.742 -0.778 1.742  1.638  O05  VJX 14 
VJX N06  N1  N  0 1 N N N N N N -12.285 -5.450  22.612 -0.255 1.208  -0.453 N06  VJX 15 
VJX N07  N2  N  0 1 N N N N N N -17.185 -4.010  22.826 2.709  -2.887 -0.285 N07  VJX 16 
VJX C08  C10 C  0 1 N N N N N N -12.879 -3.031  22.814 2.024  1.232  -1.340 C08  VJX 17 
VJX C09  C11 C  0 1 N N S N N N -12.082 -4.099  21.999 1.051  1.860  -0.340 C09  VJX 18 
VJX C11  C12 C  0 1 Y N N N N N -15.280 -2.813  21.823 3.277  -0.567 0.024  C11  VJX 19 
VJX C12  C13 C  0 1 Y N N N N N -16.676 -3.140  21.842 3.475  -1.925 0.338  C12  VJX 20 
VJX C14  C14 C  0 1 Y N N N N N -14.882 -1.934  20.795 4.051  0.413  0.654  C14  VJX 21 
VJX C16  C15 C  0 1 N N N N N N -10.505 -3.729  21.901 0.906  3.331  -0.636 C16  VJX 22 
VJX C18  C16 C  0 1 N N N N N N -12.458 -6.653  21.946 -1.100 1.204  0.597  C18  VJX 23 
VJX C19  C17 C  0 1 Y N N N N N -15.752 -1.416  19.870 4.996  0.045  1.569  C19  VJX 24 
VJX C23  C18 C  0 1 Y N N N N N -13.258 -8.033  24.015 -3.296 0.540  1.568  C23  VJX 25 
VJX C25  C19 C  0 1 Y N N N N N -13.422 -9.228  24.747 -4.527 -0.071 1.453  C25  VJX 26 
VJX H1   H1  H  0 1 N N N N N N -14.239 -4.646  24.494 0.787  -0.961 -2.280 H1   VJX 27 
VJX H2   H2  H  0 1 N N N N N N -18.627 -2.883  20.935 4.597  -3.313 1.531  H2   VJX 28 
VJX H3   H3  H  0 1 N N N N N N -17.807 -1.357  19.193 5.939  -1.567 2.614  H3   VJX 29 
VJX H4   H4  H  0 1 N N N N N N -11.717 -9.230  21.266 -2.119 -0.066 -1.559 H4   VJX 30 
VJX H5   H5  H  0 1 N N N N N N -11.985 -11.370 22.500 -4.319 -1.149 -1.743 H5   VJX 31 
VJX H6   H6  H  0 1 N N N N N N -8.823  -4.403  22.050 1.838  5.070  -0.788 H6   VJX 32 
VJX H7   H7  H  0 1 N N N N N N -12.297 -5.488  23.611 -0.512 0.779  -1.285 H7   VJX 33 
VJX H8   H8  H  0 1 N N N N N N -18.162 -4.222  22.818 2.844  -3.822 -0.065 H8   VJX 34 
VJX H9   H9  H  0 1 N N N N N N -12.478 -2.984  23.837 2.969  1.776  -1.318 H9   VJX 35 
VJX H10  H10 H  0 1 N N N N N N -12.766 -2.049  22.331 1.598  1.284  -2.342 H10  VJX 36 
VJX H11  H11 H  0 1 N N N N N N -12.480 -4.111  20.974 1.436  1.730  0.672  H11  VJX 37 
VJX H12  H12 H  0 1 N N N N N N -13.841 -1.655  20.733 3.903  1.456  0.417  H12  VJX 38 
VJX H13  H13 H  0 1 N N N N N N -15.392 -0.745  19.105 5.600  0.801  2.049  H13  VJX 39 
VJX H14  H14 H  0 1 N N N N N N -13.612 -7.109  24.447 -3.011 1.013  2.496  H14  VJX 40 
VJX H15  H15 H  0 1 N N N N N N -13.895 -9.225  25.718 -5.207 -0.076 2.292  H15  VJX 41 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
VJX C19 C20  SING Y N 1  
VJX C19 C14  DOUB Y N 2  
VJX C20 C17  DOUB Y N 3  
VJX O05 C18  DOUB N N 4  
VJX C14 C11  SING Y N 5  
VJX C17 C12  SING Y N 6  
VJX O02 C16  DOUB N N 7  
VJX C11 C12  DOUB Y N 8  
VJX C11 C10  SING N N 9  
VJX C12 N07  SING N N 10 
VJX C16 C09  SING N N 11 
VJX C16 O04  SING N N 12 
VJX C18 N06  SING N N 13 
VJX C18 C21  SING N N 14 
VJX C09 N06  SING N N 15 
VJX C09 C08  SING N N 16 
VJX C22 C21  DOUB Y N 17 
VJX C22 C24  SING Y N 18 
VJX C21 C23  SING Y N 19 
VJX C08 C10  SING N N 20 
VJX N07 C15  SING N N 21 
VJX C10 C13  DOUB N N 22 
VJX C24 C26  DOUB Y N 23 
VJX C13 C15  SING N N 24 
VJX C15 O03  DOUB N N 25 
VJX C23 C25  DOUB Y N 26 
VJX C26 C25  SING Y N 27 
VJX C26 CL01 SING N N 28 
VJX C13 H1   SING N N 29 
VJX C17 H2   SING N N 30 
VJX C20 H3   SING N N 31 
VJX C22 H4   SING N N 32 
VJX C24 H5   SING N N 33 
VJX O04 H6   SING N N 34 
VJX N06 H7   SING N N 35 
VJX N07 H8   SING N N 36 
VJX C08 H9   SING N N 37 
VJX C08 H10  SING N N 38 
VJX C09 H11  SING N N 39 
VJX C14 H12  SING N N 40 
VJX C19 H13  SING N N 41 
VJX C23 H14  SING N N 42 
VJX C25 H15  SING N N 43 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
VJX SMILES           ACDLabs              12.01 "Clc1ccc(cc1)C(=O)NC(CC1=CC(=O)Nc2ccccc21)C(=O)O"                                                                                                             
VJX InChI            InChI                1.06  "InChI=1S/C19H15ClN2O4/c20-13-7-5-11(6-8-13)18(24)22-16(19(25)26)9-12-10-17(23)21-15-4-2-1-3-14(12)15/h1-8,10,16H,9H2,(H,21,23)(H,22,24)(H,25,26)/t16-/m0/s1" 
VJX InChIKey         InChI                1.06  ALLWOAVDORUJLA-INIZCTEOSA-N                                                                                                                                   
VJX SMILES_CANONICAL CACTVS               3.385 "OC(=O)[C@H](CC1=CC(=O)Nc2ccccc12)NC(=O)c3ccc(Cl)cc3"                                                                                                         
VJX SMILES           CACTVS               3.385 "OC(=O)[CH](CC1=CC(=O)Nc2ccccc12)NC(=O)c3ccc(Cl)cc3"                                                                                                          
VJX SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "c1ccc2c(c1)C(=CC(=O)N2)C[C@@H](C(=O)O)NC(=O)c3ccc(cc3)Cl"                                                                                                    
VJX SMILES           "OpenEye OEToolkits" 2.0.7 "c1ccc2c(c1)C(=CC(=O)N2)CC(C(=O)O)NC(=O)c3ccc(cc3)Cl"                                                                                                         
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
VJX "SYSTEMATIC NAME" ACDLabs              12.01 "N-(4-chlorobenzoyl)-3-(2-oxo-1,2-dihydroquinolin-4-yl)-L-alanine"                                
VJX "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 "(2~{S})-2-[(4-chlorophenyl)carbonylamino]-3-(2-oxidanylidene-1~{H}-quinolin-4-yl)propanoic acid" 
# 
_pdbx_chem_comp_synonyms.ordinal      1 
_pdbx_chem_comp_synonyms.comp_id      VJX 
_pdbx_chem_comp_synonyms.name         "N-(4-chlorobenzoyl)-3-(2-oxo-1,2-dihydroquinolin-4-yl)-L-alanine" 
_pdbx_chem_comp_synonyms.provenance   ? 
_pdbx_chem_comp_synonyms.type         ? 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
VJX "Create component" 2023-09-13 RCSB 
VJX "Initial release"  2024-02-07 RCSB 
# 
