data_TNX
#

_chem_comp.id                                   TNX
_chem_comp.name                                 "1,5-anhydro-2-deoxy-2-(ethanethioylamino)-D-arabino-hex-1-enitol"
_chem_comp.type                                 D-saccharide
_chem_comp.pdbx_type                            ATOMS
_chem_comp.formula                              "C8 H13 N O4 S"
_chem_comp.mon_nstd_parent_comp_id              ?
_chem_comp.pdbx_synonyms                        
;N-[(2R,3S,4R)-2-(hydroxymethyl)-3,4-bis(oxidanyl)-3,4-dihydro-2H-pyran-5-yl]ethanethioamide; N-thioacetyl-D-glucal;
NTA-glucal
;

_chem_comp.pdbx_formal_charge                   0
_chem_comp.pdbx_initial_date                    2015-12-18
_chem_comp.pdbx_modified_date                   2020-07-17
_chem_comp.pdbx_ambiguous_flag                  N
_chem_comp.pdbx_release_status                  REL
_chem_comp.pdbx_replaced_by                     ?
_chem_comp.pdbx_replaces                        ?
_chem_comp.formula_weight                       219.258
_chem_comp.one_letter_code                      ?
_chem_comp.three_letter_code                    TNX
_chem_comp.pdbx_model_coordinates_details       ?
_chem_comp.pdbx_model_coordinates_missing_flag  N
_chem_comp.pdbx_ideal_coordinates_details       Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag  N
_chem_comp.pdbx_model_coordinates_db_code       5FCZ
_chem_comp.pdbx_subcomponent_list               ?
_chem_comp.pdbx_processing_site                 RCSB
#   #
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
TNX  C1   C1   C  0  1  N  N  N  -5.793  66.632  10.283  -0.259   1.411   0.860  C1   TNX   1  
TNX  S7   S7   S  0  1  N  N  N  -5.384  64.184   9.001   2.366   0.123  -1.592  S7   TNX   2  
TNX  C2   C2   C  0  1  N  N  N  -6.147  66.735   9.020   0.568   0.405   0.689  C2   TNX   3  
TNX  C3   C3   C  0  1  N  N  R  -5.298  67.575   8.057   0.112  -0.937   0.185  C3   TNX   4  
TNX  C4   C4   C  0  1  N  N  S  -4.055  68.030   8.860  -1.408  -1.052   0.344  C4   TNX   5  
TNX  C5   C5   C  0  1  N  N  R  -3.513  66.854   9.703  -2.045   0.237  -0.192  C5   TNX   6  
TNX  C6   C6   C  0  1  N  N  N  -2.379  67.351  10.587  -3.569   0.135  -0.103  C6   TNX   7  
TNX  C7   C7   C  0  1  N  N  N  -6.804  64.654   8.264   2.851   0.427   0.022  C7   TNX   8  
TNX  C8   C8   C  0  1  N  N  N  -7.558  63.720   7.341   4.315   0.513   0.365  C8   TNX   9  
TNX  N2   N2   N  0  1  N  N  N  -7.191  65.904   8.490   1.922   0.589   0.985  N2   TNX  10  
TNX  O3   O3   O  0  1  N  N  N  -6.054  68.628   7.537   0.749  -1.970   0.939  O3   TNX  11  
TNX  O4   O4   O  0  1  N  N  N  -3.093  68.471   7.957  -1.887  -2.173  -0.402  O4   TNX  12  
TNX  O5   O5   O  0  1  N  N  N  -4.507  66.284  10.576  -1.588   1.330   0.609  O5   TNX  13  
TNX  O6   O6   O  0  1  N  N  N  -1.566  66.267  10.947  -4.160   1.286  -0.709  O6   TNX  14  
TNX  H1   H1   H  0  1  N  N  N  -6.506  66.819  11.072   0.139   2.347   1.223  H1   TNX  15  
TNX  H3   H3   H  0  1  N  N  N  -4.955  66.920   7.243   0.376  -1.039  -0.867  H3   TNX  16  
TNX  H4   H4   H  0  1  N  N  N  -4.354  68.842   9.540  -1.659  -1.177   1.397  H4   TNX  17  
TNX  H5   H5   H  0  1  N  N  N  -3.123  66.083   9.022  -1.747   0.391  -1.229  H5   TNX  18  
TNX  H62  H62  H  0  1  N  N  N  -1.781  68.092  10.036  -3.904  -0.762  -0.624  H62  TNX  19  
TNX  H61  H61  H  0  1  N  N  N  -2.795  67.815  11.493  -3.870   0.080   0.943  H61  TNX  20  
TNX  H83  H83  H  0  1  N  N  N  -7.021  62.762   7.269   4.685  -0.477   0.633  H83  TNX  21  
TNX  H81  H81  H  0  1  N  N  N  -8.568  63.545   7.741   4.869   0.886  -0.496  H81  TNX  22  
TNX  H82  H82  H  0  1  N  N  N  -7.633  64.174   6.342   4.452   1.192   1.207  H82  TNX  23  
TNX  H2   H2   H  0  1  N  N  N  -8.118  66.234   8.309   2.193   0.833   1.884  H2   TNX  24  
TNX  HO3  HO3  H  0  1  N  N  N  -6.797  68.279   7.059   1.715  -1.959   0.884  HO3  TNX  25  
TNX  HO4  HO4  H  0  1  N  N  N  -2.320  68.755   8.431  -1.509  -3.019  -0.127  HO4  TNX  26  
TNX  HO6  HO6  H  0  1  N  N  N  -0.856  66.573  11.499  -5.127   1.289  -0.689  HO6  TNX  27  
#   #
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
TNX  C8  C7   SING  N  N   1  
TNX  O3  C3   SING  N  N   2  
TNX  O4  C4   SING  N  N   3  
TNX  C3  C4   SING  N  N   4  
TNX  C3  C2   SING  N  N   5  
TNX  C7  N2   SING  N  N   6  
TNX  C7  S7   DOUB  N  N   7  
TNX  N2  C2   SING  N  N   8  
TNX  C4  C5   SING  N  N   9  
TNX  C2  C1   DOUB  N  N  10  
TNX  C5  O5   SING  N  N  11  
TNX  C5  C6   SING  N  N  12  
TNX  C1  O5   SING  N  N  13  
TNX  C6  O6   SING  N  N  14  
TNX  C1  H1   SING  N  N  15  
TNX  C3  H3   SING  N  N  16  
TNX  C4  H4   SING  N  N  17  
TNX  C5  H5   SING  N  N  18  
TNX  C6  H62  SING  N  N  19  
TNX  C6  H61  SING  N  N  20  
TNX  C8  H83  SING  N  N  21  
TNX  C8  H81  SING  N  N  22  
TNX  C8  H82  SING  N  N  23  
TNX  N2  H2   SING  N  N  24  
TNX  O3  HO3  SING  N  N  25  
TNX  O4  HO4  SING  N  N  26  
TNX  O6  HO6  SING  N  N  27  
#   #
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
TNX  SMILES            ACDLabs               12.01  "C=1OC(C(C(C=1NC(=S)C)O)O)CO"  
TNX  InChI             InChI                 1.03   "InChI=1S/C8H13NO4S/c1-4(14)9-5-3-13-6(2-10)8(12)7(5)11/h3,6-8,10-12H,2H2,1H3,(H,9,14)/t6-,7-,8-/m1/s1"  
TNX  InChIKey          InChI                 1.03   VWPHMQQBRGEPGS-BWZBUEFSSA-N  
TNX  SMILES_CANONICAL  CACTVS                3.385  "CC(=S)NC1=CO[C@H](CO)[C@@H](O)[C@@H]1O"  
TNX  SMILES            CACTVS                3.385  "CC(=S)NC1=CO[CH](CO)[CH](O)[CH]1O"  
TNX  SMILES_CANONICAL  "OpenEye OEToolkits"  2.0.7  "CC(=S)NC1=CO[C@@H]([C@H]([C@@H]1O)O)CO"  
TNX  SMILES            "OpenEye OEToolkits"  2.0.7  "CC(=S)NC1=COC(C(C1O)O)CO"  
#   #
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
TNX  "SYSTEMATIC NAME"  ACDLabs               12.01  "1,5-anhydro-2-deoxy-2-(ethanethioylamino)-D-arabino-hex-1-enitol"  
TNX  "SYSTEMATIC NAME"  "OpenEye OEToolkits"  2.0.7  "~{N}-[(2~{R},3~{S},4~{R})-2-(hydroxymethyl)-3,4-bis(oxidanyl)-3,4-dihydro-2~{H}-pyran-5-yl]ethanethioamide"  
#   #
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
TNX  "Create component"          2015-12-18  RCSB  
TNX  "Initial release"           2016-10-26  RCSB  
TNX  "Other modification"        2020-04-11  RCSB  
TNX  "Modify synonyms"           2020-06-29  PDBE  
TNX  "Other modification"        2020-07-03  RCSB  
TNX  "Modify synonyms"           2020-07-17  RCSB  
TNX  "Modify component atom id"  2020-07-17  RCSB  
#   #
loop_
_pdbx_chem_comp_feature.comp_id
_pdbx_chem_comp_feature.type
_pdbx_chem_comp_feature.value
_pdbx_chem_comp_feature.source
_pdbx_chem_comp_feature.support
TNX  "CARBOHYDRATE ISOMER"                  D             PDB  ?  
TNX  "CARBOHYDRATE RING"                    dihydropyran  PDB  ?  
TNX  "CARBOHYDRATE PRIMARY CARBONYL GROUP"  aldose        PDB  ?  
#   #
loop_
_pdbx_chem_comp_synonyms.ordinal
_pdbx_chem_comp_synonyms.comp_id
_pdbx_chem_comp_synonyms.name
_pdbx_chem_comp_synonyms.provenance
_pdbx_chem_comp_synonyms.type
1  TNX  "N-[(2R,3S,4R)-2-(hydroxymethyl)-3,4-bis(oxidanyl)-3,4-dihydro-2H-pyran-5-yl]ethanethioamide"  PDB  ?  
2  TNX  N-thioacetyl-D-glucal                                                                          PDB  ?  
3  TNX  NTA-glucal                                                                                     PDB  ?  
##
