data_SVX
# 
_chem_comp.id                                    SVX 
_chem_comp.name                                  "O-[(R)-ETHOXY(METHYL)PHOSPHORYL]-L-SERINE" 
_chem_comp.type                                  "L-PEPTIDE LINKING" 
_chem_comp.pdbx_type                             ATOMP 
_chem_comp.formula                               "C6 H14 N O5 P" 
_chem_comp.mon_nstd_parent_comp_id               SER 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2007-02-13 
_chem_comp.pdbx_modified_date                    2024-09-27 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        211.153 
_chem_comp.one_letter_code                       S 
_chem_comp.three_letter_code                     SVX 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        ? 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  RCSB 
_chem_comp.pdbx_pcm                              N 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.pdbx_backbone_atom_flag 
_chem_comp_atom.pdbx_n_terminal_atom_flag 
_chem_comp_atom.pdbx_c_terminal_atom_flag 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
SVX N    N    N 0 1 N N N N N N 25.625 12.692 14.426 -2.069 0.138  1.878  N    SVX 1  
SVX CA   CA   C 0 1 N N S N N N 26.711 12.934 13.453 -2.109 0.568  0.474  CA   SVX 2  
SVX C    C    C 0 1 N N N N N N 27.986 12.068 13.705 -3.254 -0.115 -0.229 C    SVX 3  
SVX CB   CB   C 0 1 N N N N N N 26.979 14.432 13.293 -0.793 0.192  -0.211 CB   SVX 4  
SVX O    O    O 0 1 N N N N N N 27.915 10.846 13.579 -3.733 -1.122 0.236  O    SVX 5  
SVX OG   OG   O 0 1 N N N N N N 27.593 14.703 12.041 0.279  0.928  0.380  OG   SVX 6  
SVX P1   P1   P 0 1 N N R N N N 28.738 15.805 12.239 1.810  0.782  -0.097 P1   SVX 7  
SVX C4   C4   C 0 1 N N N N N N 29.661 15.435 10.737 2.842  1.990  0.797  C4   SVX 8  
SVX OXT  OXT  O 0 1 N Y N N N N 29.123 12.661 14.067 -3.741 0.396  -1.370 OXT  SVX 9  
SVX C2   C2   C 0 1 N N N N N N 29.272 18.220 13.054 1.794  -1.871 -0.412 C2   SVX 10 
SVX O6   O6   O 0 1 N N N N N N 29.524 15.456 13.571 1.901  1.037  -1.551 O6   SVX 11 
SVX O5   O5   O 0 1 N N N N N N 28.377 17.345 12.329 2.331  -0.708 0.221  O5   SVX 12 
SVX C1   C1   C 0 1 N N N N N N 30.121 19.121 12.169 2.511  -3.115 0.116  C1   SVX 13 
SVX HN1  HN1  H 0 1 N N N N N N 24.844 13.276 14.206 -1.943 -0.861 1.947  HN1  SVX 14 
SVX HN2  HN2  H 0 1 N Y N N N N 25.346 11.733 14.382 -1.350 0.630  2.387  HN2  SVX 15 
SVX HA   HA   H 0 1 N N N N N N 26.359 12.577 12.474 -2.246 1.648  0.428  HA   SVX 16 
SVX HBC1 HBC1 H 0 0 N N N N N N 27.648 14.765 14.100 -0.612 -0.876 -0.089 HBC1 SVX 17 
SVX HBC2 HBC2 H 0 0 N N N N N N 26.024 14.975 13.350 -0.856 0.430  -1.273 HBC2 SVX 18 
SVX HOT  HOT  H 0 1 N Y N N N N 29.797 12.004 14.194 -4.476 -0.076 -1.784 HOT  SVX 19 
SVX H4C1 H4C1 H 0 0 N N N N N N 30.531 16.105 10.666 2.776  1.803  1.869  H4C1 SVX 20 
SVX H4C2 H4C2 H 0 0 N N N N N N 30.004 14.390 10.766 3.879  1.891  0.475  H4C2 SVX 21 
SVX H4C3 H4C3 H 0 0 N N N N N N 29.012 15.584 9.862  2.490  2.999  0.583  H4C3 SVX 22 
SVX H2C1 H2C1 H 0 0 N N N N N N 28.662 18.864 13.705 0.729  -1.945 -0.192 H2C1 SVX 23 
SVX H2C2 H2C2 H 0 0 N N N N N N 29.952 17.591 13.647 1.939  -1.798 -1.490 H2C2 SVX 24 
SVX H1C1 H1C1 H 0 0 N N N N N N 30.768 19.749 12.798 3.576  -3.041 -0.103 H1C1 SVX 25 
SVX H1C2 H1C2 H 0 0 N N N N N N 30.743 18.502 11.506 2.366  -3.188 1.194  H1C2 SVX 26 
SVX H1C3 H1C3 H 0 0 N N N N N N 29.465 19.763 11.563 2.102  -4.003 -0.366 H1C3 SVX 27 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
SVX CB  OG   SING N N 1  
SVX OG  P1   SING N N 2  
SVX P1  C4   SING N N 3  
SVX C   OXT  SING N N 4  
SVX P1  O6   DOUB N N 5  
SVX C2  O5   SING N N 6  
SVX P1  O5   SING N N 7  
SVX C2  C1   SING N N 8  
SVX N   HN1  SING N N 9  
SVX N   HN2  SING N N 10 
SVX CA  HA   SING N N 11 
SVX CB  HBC1 SING N N 12 
SVX CB  HBC2 SING N N 13 
SVX OXT HOT  SING N N 14 
SVX C4  H4C1 SING N N 15 
SVX C4  H4C2 SING N N 16 
SVX C4  H4C3 SING N N 17 
SVX C2  H2C1 SING N N 18 
SVX C2  H2C2 SING N N 19 
SVX C1  H1C1 SING N N 20 
SVX C1  H1C2 SING N N 21 
SVX C1  H1C3 SING N N 22 
SVX N   CA   SING N N 23 
SVX CA  C    SING N N 24 
SVX CA  CB   SING N N 25 
SVX C   O    DOUB N N 26 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
SVX SMILES           ACDLabs              12.01 "O=P(OCC)(OCC(N)C(=O)O)C"                                                                   
SVX SMILES_CANONICAL CACTVS               3.370 "CCO[P@@](C)(=O)OC[C@H](N)C(O)=O"                                                           
SVX SMILES           CACTVS               3.370 "CCO[P](C)(=O)OC[CH](N)C(O)=O"                                                              
SVX SMILES_CANONICAL "OpenEye OEToolkits" 1.7.0 "CCO[P@](=O)(C)OC[C@@H](C(=O)O)N"                                                           
SVX SMILES           "OpenEye OEToolkits" 1.7.0 "CCOP(=O)(C)OCC(C(=O)O)N"                                                                   
SVX InChI            InChI                1.03  "InChI=1S/C6H14NO5P/c1-3-11-13(2,10)12-4-5(7)6(8)9/h5H,3-4,7H2,1-2H3,(H,8,9)/t5-,13+/m0/s1" 
SVX InChIKey         InChI                1.03  SCPXXJJSRSCUSM-VPROBKIXSA-N                                                                 
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
SVX "SYSTEMATIC NAME" ACDLabs              12.01 "O-[(R)-ethoxy(methyl)phosphoryl]-L-serine"                    
SVX "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.7.0 "(2S)-2-azanyl-3-[ethoxy(methyl)phosphoryl]oxy-propanoic acid" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
SVX "Create component"    2007-02-13 RCSB 
SVX "Modify linking type" 2010-12-17 RCSB 
SVX "Modify descriptor"   2011-06-04 RCSB 
SVX "Modify PCM"          2024-09-27 PDBE 
# 
