data_SMX
#

_chem_comp.id                                   SMX
_chem_comp.name                                 "(6R,7R)-7-{[(2R)-2-hydroxy-2-phenylacetyl]amino}-3-{[(1-methyl-1H-tetrazol-5-yl)sulfanyl]methyl}-8-oxo-5-thia-1-azabicyclo[4.2.0]oct-2-ene-2-carboxylic acid"
_chem_comp.type                                 NON-POLYMER
_chem_comp.pdbx_type                            HETAIN
_chem_comp.formula                              "C18 H18 N6 O5 S2"
_chem_comp.mon_nstd_parent_comp_id              ?
_chem_comp.pdbx_synonyms                        "CEFAMANDOLE, free form"
_chem_comp.pdbx_formal_charge                   0
_chem_comp.pdbx_initial_date                    2010-09-17
_chem_comp.pdbx_modified_date                   2021-03-13
_chem_comp.pdbx_ambiguous_flag                  N
_chem_comp.pdbx_release_status                  REL
_chem_comp.pdbx_replaced_by                     ?
_chem_comp.pdbx_replaces                        ?
_chem_comp.formula_weight                       462.503
_chem_comp.one_letter_code                      ?
_chem_comp.three_letter_code                    SMX
_chem_comp.pdbx_model_coordinates_details       ?
_chem_comp.pdbx_model_coordinates_missing_flag  N
_chem_comp.pdbx_ideal_coordinates_details       Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag  N
_chem_comp.pdbx_model_coordinates_db_code       3NY4
_chem_comp.pdbx_subcomponent_list               ?
_chem_comp.pdbx_processing_site                 RCSB
#   #
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
SMX  C    C    C  0  1  N  N  N   0.128  -6.873   -4.316   1.067   2.297  -0.512  C    SMX   1  
SMX  N    N    N  0  1  N  N  N  -1.639  -7.015   -6.018   2.981   0.757  -0.112  N    SMX   2  
SMX  O    O    O  0  1  N  N  N   0.938  -7.738   -4.407   1.090   3.426  -0.069  O    SMX   3  
SMX  CA   CA   C  0  1  N  N  R  -0.733  -6.105   -5.297   2.115   1.397  -1.105  CA   SMX   4  
SMX  CB   CB   C  0  1  N  N  R  -1.299  -5.493   -3.995   0.943   0.545  -1.538  CB   SMX   5  
SMX  NBD  NBD  N  0  1  N  N  N  -0.411  -6.385   -3.243   0.108   1.392  -0.651  NBD  SMX   6  
SMX  NBE  NBE  N  0  1  Y  N  N   1.412  -3.977    0.587  -6.882  -1.052  -0.264  NBE  SMX   7  
SMX  NAN  NAN  N  0  1  Y  N  N   1.527  -3.098   -1.197  -6.873  -1.084   1.901  NAN  SMX   8  
SMX  NAO  NAO  N  0  1  Y  N  N   0.328  -3.154   -1.004  -5.670  -0.878   1.500  NAO  SMX   9  
SMX  NAP  NAP  N  0  1  Y  N  N   2.156  -3.556   -0.252  -7.668  -1.198   0.892  NAP  SMX  10  
SMX  CAA  CAA  C  0  1  N  N  N   1.757  -4.566    1.828  -7.331  -1.103  -1.658  CAA  SMX  11  
SMX  OAB  OAB  O  0  1  N  N  N   1.831  -6.911   -1.549  -2.753   2.773  -0.302  OAB  SMX  12  
SMX  OAC  OAC  O  0  1  N  N  N  -1.942  -5.549   -7.697   4.657   2.130  -0.589  OAC  SMX  13  
SMX  OAE  OAE  O  0  1  N  N  N   0.486  -7.958   -0.209  -1.967   2.428   1.745  OAE  SMX  14  
SMX  OAF  OAF  O  0  1  N  N  N  -3.600  -8.663   -7.606   6.365   1.259   1.180  OAF  SMX  15  
SMX  CAG  CAG  C  0  1  Y  N  N  -1.839  -8.188  -11.911   5.905  -3.490  -0.083  CAG  SMX  16  
SMX  CAH  CAH  C  0  1  Y  N  N  -3.057  -7.625  -11.628   4.878  -3.212   0.799  CAH  SMX  17  
SMX  CAI  CAI  C  0  1  Y  N  N  -0.967  -8.572  -10.890   6.684  -2.463  -0.583  CAI  SMX  18  
SMX  CAJ  CAJ  C  0  1  Y  N  N  -3.432  -7.453  -10.332   4.628  -1.907   1.179  CAJ  SMX  19  
SMX  CAK  CAK  C  0  1  Y  N  N  -1.343  -8.404   -9.582   6.433  -1.158  -0.203  CAK  SMX  20  
SMX  CAL  CAL  C  0  1  N  N  N  -1.426  -5.906    0.385  -2.938  -0.408   0.497  CAL  SMX  21  
SMX  CAM  CAM  C  0  1  N  N  N  -2.522  -5.072   -1.787  -0.907  -1.381  -0.680  CAM  SMX  22  
SMX  SAR  SAR  S  0  1  N  N  N  -1.199  -4.101    0.896  -4.185  -0.593  -0.802  SAR  SMX  23  
SMX  SAS  SAS  S  0  1  N  N  N  -2.979  -5.748   -3.452   0.889  -1.139  -0.837  SAS  SMX  24  
SMX  CAT  CAT  C  0  1  N  N  N   0.674  -7.203   -1.157  -2.011   2.147   0.428  CAT  SMX  25  
SMX  CAU  CAU  C  0  1  N  N  N  -2.128  -6.674   -7.201   4.241   1.201   0.070  CAU  SMX  26  
SMX  CAV  CAV  C  0  1  N  N  N  -1.435  -5.952   -1.114  -1.589  -0.174  -0.132  CAV  SMX  27  
SMX  CAX  CAX  C  0  1  N  N  N  -0.439  -6.537   -1.876  -1.160   1.079  -0.127  CAX  SMX  28  
SMX  CAY  CAY  C  0  1  Y  N  N  -2.584  -7.854   -9.310   5.405  -0.880   0.678  CAY  SMX  29  
SMX  CAZ  CAZ  C  0  1  Y  N  N   0.230  -3.726    0.160  -5.621  -0.847   0.186  CAZ  SMX  30  
SMX  CBA  CBA  C  0  1  N  N  R  -3.047  -7.619   -7.903   5.132   0.543   1.092  CBA  SMX  31  
SMX  H1   H1   H  0  1  N  N  N  -1.886  -7.895   -5.612   2.648   0.014   0.415  H1   SMX  32  
SMX  H2   H2   H  0  1  N  N  N  -0.183  -5.390   -5.927   2.669   1.845  -1.930  H2   SMX  33  
SMX  H3   H3   H  0  1  N  N  N  -1.043  -4.428   -3.890   0.712   0.590  -2.602  H3   SMX  34  
SMX  H4   H4   H  0  1  N  N  N   2.852  -4.590    1.931  -7.609  -0.101  -1.987  H4   SMX  35  
SMX  H5   H5   H  0  1  N  N  N   1.325  -3.974    2.648  -6.525  -1.482  -2.286  H5   SMX  36  
SMX  H6   H6   H  0  1  N  N  N   1.362  -5.592    1.869  -8.195  -1.763  -1.737  H6   SMX  37  
SMX  H7   H7   H  0  1  N  N  N   1.322  -8.249    0.135  -2.543   3.136   2.063  H7   SMX  38  
SMX  H8   H8   H  0  1  N  N  N  -1.549  -8.337  -12.941   6.104  -4.510  -0.377  H8   SMX  39  
SMX  H9   H9   H  0  1  N  N  N  -3.714  -7.320  -12.429   4.269  -4.015   1.189  H9   SMX  40  
SMX  H10  H10  H  0  1  N  N  N  -0.004  -8.998  -11.129   7.487  -2.680  -1.272  H10  SMX  41  
SMX  H11  H11  H  0  1  N  N  N  -4.387  -7.006  -10.099   3.824  -1.690   1.868  H11  SMX  42  
SMX  H12  H12  H  0  1  N  N  N  -0.683  -8.696   -8.778   7.041  -0.355  -0.594  H12  SMX  43  
SMX  H13  H13  H  0  1  N  N  N  -2.378  -6.291    0.778  -3.196   0.440   1.130  H13  SMX  44  
SMX  H14  H14  H  0  1  N  N  N  -0.596  -6.514    0.774  -2.906  -1.315   1.100  H14  SMX  45  
SMX  H15  H15  H  0  1  N  N  N  -2.135  -4.049   -1.907  -1.321  -1.606  -1.663  H15  SMX  46  
SMX  H16  H16  H  0  1  N  N  N  -3.417  -5.053   -1.148  -1.094  -2.226  -0.016  H16  SMX  47  
SMX  H17  H17  H  0  1  N  N  N  -3.930  -8.605   -6.717   6.860   1.293   0.350  H17  SMX  48  
SMX  H18  H18  H  0  1  N  N  N  -3.899  -6.950   -8.093   4.637   0.550   2.063  H18  SMX  49  
#   #
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
SMX  CAG  CAH  DOUB  Y  N   1  
SMX  CAG  CAI  SING  Y  N   2  
SMX  CAH  CAJ  SING  Y  N   3  
SMX  CAI  CAK  DOUB  Y  N   4  
SMX  CAJ  CAY  DOUB  Y  N   5  
SMX  CAK  CAY  SING  Y  N   6  
SMX  CAY  CBA  SING  N  N   7  
SMX  CBA  OAF  SING  N  N   8  
SMX  CBA  CAU  SING  N  N   9  
SMX  OAC  CAU  DOUB  N  N  10  
SMX  CAU  N    SING  N  N  11  
SMX  N    CA   SING  N  N  12  
SMX  CA   C    SING  N  N  13  
SMX  CA   CB   SING  N  N  14  
SMX  O    C    DOUB  N  N  15  
SMX  C    NBD  SING  N  N  16  
SMX  CB   SAS  SING  N  N  17  
SMX  CB   NBD  SING  N  N  18  
SMX  SAS  CAM  SING  N  N  19  
SMX  NBD  CAX  SING  N  N  20  
SMX  CAX  CAT  SING  N  N  21  
SMX  CAX  CAV  DOUB  N  N  22  
SMX  CAM  CAV  SING  N  N  23  
SMX  OAB  CAT  DOUB  N  N  24  
SMX  NAN  NAO  SING  Y  N  25  
SMX  NAN  NAP  DOUB  Y  N  26  
SMX  CAT  OAE  SING  N  N  27  
SMX  CAV  CAL  SING  N  N  28  
SMX  NAO  CAZ  DOUB  Y  N  29  
SMX  NAP  NBE  SING  Y  N  30  
SMX  CAZ  NBE  SING  Y  N  31  
SMX  CAZ  SAR  SING  N  N  32  
SMX  CAL  SAR  SING  N  N  33  
SMX  NBE  CAA  SING  N  N  34  
SMX  N    H1   SING  N  N  35  
SMX  CA   H2   SING  N  N  36  
SMX  CB   H3   SING  N  N  37  
SMX  CAA  H4   SING  N  N  38  
SMX  CAA  H5   SING  N  N  39  
SMX  CAA  H6   SING  N  N  40  
SMX  OAE  H7   SING  N  N  41  
SMX  CAG  H8   SING  N  N  42  
SMX  CAH  H9   SING  N  N  43  
SMX  CAI  H10  SING  N  N  44  
SMX  CAJ  H11  SING  N  N  45  
SMX  CAK  H12  SING  N  N  46  
SMX  CAL  H13  SING  N  N  47  
SMX  CAL  H14  SING  N  N  48  
SMX  CAM  H15  SING  N  N  49  
SMX  CAM  H16  SING  N  N  50  
SMX  OAF  H17  SING  N  N  51  
SMX  CBA  H18  SING  N  N  52  
#   #
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
SMX  SMILES            ACDLabs               12.01  "O=C(O)C=2N4C(=O)C(NC(=O)C(O)c1ccccc1)C4SCC=2CSc3nnnn3C"  
SMX  InChI             InChI                 1.03   "InChI=1S/C18H18N6O5S2/c1-23-18(20-21-22-23)31-8-10-7-30-16-11(15(27)24(16)12(10)17(28)29)19-14(26)13(25)9-5-3-2-4-6-9/h2-6,11,13,16,25H,7-8H2,1H3,(H,19,26)(H,28,29)/t11-,13-,16-/m1/s1"  
SMX  InChIKey          InChI                 1.03   OLVCFLKTBJRLHI-AXAPSJFSSA-N  
SMX  SMILES_CANONICAL  CACTVS                3.370  "Cn1nnnc1SCC2=C(N3[C@H](SC2)[C@H](NC(=O)[C@H](O)c4ccccc4)C3=O)C(O)=O"  
SMX  SMILES            CACTVS                3.370  "Cn1nnnc1SCC2=C(N3[CH](SC2)[CH](NC(=O)[CH](O)c4ccccc4)C3=O)C(O)=O"  
SMX  SMILES_CANONICAL  "OpenEye OEToolkits"  1.7.6  "Cn1c(nnn1)SCC2=C(N3[C@@H]([C@@H](C3=O)NC(=O)C(c4ccccc4)O)SC2)C(=O)O"  
SMX  SMILES            "OpenEye OEToolkits"  1.7.6  "Cn1c(nnn1)SCC2=C(N3C(C(C3=O)NC(=O)C(c4ccccc4)O)SC2)C(=O)O"  
#   #
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
SMX  "SYSTEMATIC NAME"  ACDLabs               12.01  "(6R,7R)-7-{[(2R)-2-hydroxy-2-phenylacetyl]amino}-3-{[(1-methyl-1H-tetrazol-5-yl)sulfanyl]methyl}-8-oxo-5-thia-1-azabicyclo[4.2.0]oct-2-ene-2-carboxylic acid"  
SMX  "SYSTEMATIC NAME"  "OpenEye OEToolkits"  1.7.6  "(6R,7R)-3-[(1-methyl-1,2,3,4-tetrazol-5-yl)sulfanylmethyl]-8-oxidanylidene-7-[(2-oxidanyl-2-phenyl-ethanoyl)amino]-5-thia-1-azabicyclo[4.2.0]oct-2-ene-2-carboxylic acid"  
#   #
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
SMX  "Create component"      2010-09-17  RCSB  
SMX  "Modify aromatic_flag"  2011-06-04  RCSB  
SMX  "Modify descriptor"     2011-06-04  RCSB  
SMX  "Other modification"    2012-05-16  RCSB  
SMX  "Modify synonyms"       2021-03-13  RCSB  
#
_pdbx_chem_comp_synonyms.ordinal     1
_pdbx_chem_comp_synonyms.comp_id     SMX
_pdbx_chem_comp_synonyms.name        "CEFAMANDOLE, free form"
_pdbx_chem_comp_synonyms.provenance  PDB
_pdbx_chem_comp_synonyms.type        ?
##
