data_SJX
# 
_chem_comp.id                                    SJX 
_chem_comp.name                                  "8-(4-azanylbutyl)-6-[2-chloranyl-4-(6-methylpyridin-2-yl)phenyl]-2-(methylamino)pyrido[2,3-d]pyrimidin-7-one" 
_chem_comp.type                                  non-polymer 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C24 H25 Cl N6 O" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2022-12-15 
_chem_comp.pdbx_modified_date                    2023-05-15 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        448.948 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     SJX 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        8BZJ 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  PDBE 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
SJX N   N1  N  0 1 N N N 30.229 -13.640 22.724 6.259  -2.260 0.292  N   SJX 1  
SJX C   C1  C  0 1 N N N 30.105 -15.077 22.827 6.878  -3.477 0.823  C   SJX 2  
SJX O   O1  O  0 1 N N N 28.742 -13.693 16.043 0.678  1.617  -0.887 O   SJX 3  
SJX C1  C2  C  0 1 Y N N 30.189 -12.973 21.564 4.892  -2.087 0.377  C1  SJX 4  
SJX C10 C3  C  0 1 Y N N 28.065 -9.217  11.805 -5.370 0.462  0.490  C10 SJX 5  
SJX C11 C4  C  0 1 Y N N 28.186 -7.854  11.553 -5.873 1.355  1.434  C11 SJX 6  
SJX C12 C5  C  0 1 Y N N 27.943 -7.391  10.273 -7.240 1.559  1.505  C12 SJX 7  
SJX C13 C6  C  0 1 Y N N 27.589 -8.288  9.284  -8.060 0.862  0.629  C13 SJX 8  
SJX C14 C7  C  0 1 Y N N 27.479 -9.642  9.604  -7.493 -0.009 -0.283 C14 SJX 9  
SJX C15 C8  C  0 1 N N N 27.137 -10.667 8.564  -8.380 -0.767 -1.237 C15 SJX 10 
SJX C16 C9  C  0 1 Y N N 29.736 -9.972  13.509 -3.398 -0.659 -0.543 C16 SJX 11 
SJX C17 C10 C  0 1 Y N N 30.048 -10.478 14.758 -2.039 -0.873 -0.625 C17 SJX 12 
SJX C18 C11 C  0 1 N N N 29.073 -13.010 17.003 1.158  0.584  -0.455 C18 SJX 13 
SJX C19 C12 C  0 1 N N N 28.891 -15.041 18.311 3.343  1.398  -1.143 C19 SJX 14 
SJX C2  C13 C  0 1 Y N N 30.460 -11.003 20.457 2.850  -2.922 1.054  C2  SJX 15 
SJX C20 C14 C  0 1 N N N 27.487 -15.284 18.822 3.817  2.375  -0.065 C20 SJX 16 
SJX C21 C15 C  0 1 N N N 26.406 -14.741 17.898 4.712  3.441  -0.700 C21 SJX 17 
SJX C22 C16 C  0 1 N N N 25.021 -15.004 18.447 5.185  4.417  0.379  C22 SJX 18 
SJX C23 C17 C  0 1 Y N N 29.661 -12.949 19.363 3.047  -0.771 -0.037 C23 SJX 19 
SJX C3  C18 C  0 1 Y N N 29.992 -11.582 19.274 2.236  -1.765 0.552  C3  SJX 20 
SJX C4  C19 C  0 1 N N N 29.812 -10.925 18.016 0.838  -1.581 0.642  C4  SJX 21 
SJX C5  C20 C  0 1 N N N 29.354 -11.577 16.925 0.287  -0.427 0.150  C5  SJX 22 
SJX C6  C21 C  0 1 Y N N 29.053 -10.873 15.651 -1.173 -0.199 0.239  C6  SJX 23 
SJX C7  C22 C  0 1 Y N N 27.724 -10.696 15.270 -1.685 0.690  1.186  C7  SJX 24 
SJX C8  C23 C  0 1 Y N N 27.409 -10.171 14.030 -3.043 0.902  1.268  C8  SJX 25 
SJX C9  C24 C  0 1 Y N N 28.404 -9.802  13.129 -3.908 0.233  0.401  C9  SJX 26 
SJX N1  N2  N  0 1 Y N N 30.568 -11.684 21.600 4.161  -3.039 0.947  N1  SJX 27 
SJX N2  N3  N  0 1 Y N N 27.702 -10.101 10.850 -6.189 -0.188 -0.327 N2  SJX 28 
SJX N3  N4  N  0 1 N N N 29.216 -13.615 18.236 2.486  0.377  -0.535 N3  SJX 29 
SJX N4  N5  N  0 1 N N N 23.971 -14.590 17.512 6.045  5.441  -0.231 N4  SJX 30 
SJX N5  N6  N  0 1 Y N N 29.748 -13.655 20.494 4.358  -0.976 -0.106 N5  SJX 31 
SJX CL  CL1 CL 0 0 N N N 31.722 -10.529 15.227 -1.404 -1.979 -1.803 CL  SJX 32 
SJX H1  H1  H  0 1 N N N 31.110 -13.412 23.139 6.810  -1.574 -0.117 H1  SJX 33 
SJX H2  H2  H  0 1 N N N 30.170 -15.376 23.883 6.473  -4.347 0.306  H2  SJX 34 
SJX H3  H3  H  0 1 N N N 29.134 -15.392 22.416 7.956  -3.432 0.670  H3  SJX 35 
SJX H4  H4  H  0 1 N N N 30.916 -15.557 22.260 6.665  -3.557 1.889  H4  SJX 36 
SJX H5  H5  H  0 1 N N N 28.464 -7.171  12.342 -5.206 1.881  2.101  H5  SJX 37 
SJX H6  H6  H  0 1 N N N 28.029 -6.338  10.049 -7.659 2.244  2.227  H6  SJX 38 
SJX H7  H7  H  0 1 N N N 27.400 -7.946  8.277  -9.131 1.002  0.656  H7  SJX 39 
SJX H8  H8  H  0 1 N N N 27.127 -11.667 9.023  -8.515 -0.185 -2.148 H8  SJX 40 
SJX H9  H9  H  0 1 N N N 26.144 -10.446 8.145  -7.917 -1.723 -1.482 H9  SJX 41 
SJX H10 H10 H  0 1 N N N 27.889 -10.640 7.761  -9.349 -0.942 -0.770 H10 SJX 42 
SJX H11 H11 H  0 1 N N N 30.528 -9.707  12.824 -4.068 -1.180 -1.210 H11 SJX 43 
SJX H12 H12 H  0 1 N N N 28.982 -15.478 17.306 2.780  1.941  -1.903 H12 SJX 44 
SJX H13 H13 H  0 1 N N N 29.604 -15.531 18.990 4.207  0.919  -1.605 H13 SJX 45 
SJX H14 H14 H  0 1 N N N 30.746 -9.962  20.446 2.263  -3.701 1.519  H14 SJX 46 
SJX H15 H15 H  0 1 N N N 27.384 -14.798 19.803 2.953  2.853  0.396  H15 SJX 47 
SJX H16 H16 H  0 1 N N N 27.339 -16.368 18.933 4.380  1.832  0.694  H16 SJX 48 
SJX H17 H17 H  0 1 N N N 26.499 -15.227 16.916 5.576  2.962  -1.161 H17 SJX 49 
SJX H18 H18 H  0 1 N N N 26.545 -13.656 17.785 4.148  3.983  -1.459 H18 SJX 50 
SJX H19 H19 H  0 1 N N N 24.900 -14.445 19.387 4.322  4.896  0.840  H19 SJX 51 
SJX H20 H20 H  0 1 N N N 24.916 -16.081 18.644 5.749  3.875  1.138  H20 SJX 52 
SJX H21 H21 H  0 1 N N N 30.050 -9.875  17.936 0.213  -2.338 1.092  H21 SJX 53 
SJX H22 H22 H  0 1 N N N 26.932 -10.972 15.950 -1.016 1.212  1.854  H22 SJX 54 
SJX H23 H23 H  0 1 N N N 26.372 -10.045 13.756 -3.439 1.589  2.000  H23 SJX 55 
SJX H24 H24 H  0 1 N N N 23.074 -14.780 17.912 5.566  5.915  -0.983 H24 SJX 56 
SJX H25 H25 H  0 1 N N N 24.054 -13.610 17.331 6.371  6.099  0.461  H25 SJX 57 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
SJX C15 C14 SING N N 1  
SJX C13 C14 DOUB Y N 2  
SJX C13 C12 SING Y N 3  
SJX C14 N2  SING Y N 4  
SJX C12 C11 DOUB Y N 5  
SJX N2  C10 DOUB Y N 6  
SJX C11 C10 SING Y N 7  
SJX C10 C9  SING N N 8  
SJX C9  C16 DOUB Y N 9  
SJX C9  C8  SING Y N 10 
SJX C16 C17 SING Y N 11 
SJX C8  C7  DOUB Y N 12 
SJX C17 CL  SING N N 13 
SJX C17 C6  DOUB Y N 14 
SJX C7  C6  SING Y N 15 
SJX C6  C5  SING N N 16 
SJX O   C18 DOUB N N 17 
SJX C5  C18 SING N N 18 
SJX C5  C4  DOUB N N 19 
SJX C18 N3  SING N N 20 
SJX N4  C22 SING N N 21 
SJX C21 C22 SING N N 22 
SJX C21 C20 SING N N 23 
SJX C4  C3  SING N N 24 
SJX N3  C19 SING N N 25 
SJX N3  C23 SING N N 26 
SJX C19 C20 SING N N 27 
SJX C3  C23 DOUB Y N 28 
SJX C3  C2  SING Y N 29 
SJX C23 N5  SING Y N 30 
SJX C2  N1  DOUB Y N 31 
SJX N5  C1  DOUB Y N 32 
SJX C1  N1  SING Y N 33 
SJX C1  N   SING N N 34 
SJX N   C   SING N N 35 
SJX N   H1  SING N N 36 
SJX C   H2  SING N N 37 
SJX C   H3  SING N N 38 
SJX C   H4  SING N N 39 
SJX C11 H5  SING N N 40 
SJX C12 H6  SING N N 41 
SJX C13 H7  SING N N 42 
SJX C15 H8  SING N N 43 
SJX C15 H9  SING N N 44 
SJX C15 H10 SING N N 45 
SJX C16 H11 SING N N 46 
SJX C19 H12 SING N N 47 
SJX C19 H13 SING N N 48 
SJX C2  H14 SING N N 49 
SJX C20 H15 SING N N 50 
SJX C20 H16 SING N N 51 
SJX C21 H17 SING N N 52 
SJX C21 H18 SING N N 53 
SJX C22 H19 SING N N 54 
SJX C22 H20 SING N N 55 
SJX C4  H21 SING N N 56 
SJX C7  H22 SING N N 57 
SJX C8  H23 SING N N 58 
SJX N4  H24 SING N N 59 
SJX N4  H25 SING N N 60 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
SJX InChI            InChI                1.06  "InChI=1S/C24H25ClN6O/c1-15-6-5-7-21(29-15)16-8-9-18(20(25)13-16)19-12-17-14-28-24(27-2)30-22(17)31(23(19)32)11-4-3-10-26/h5-9,12-14H,3-4,10-11,26H2,1-2H3,(H,27,28,30)" 
SJX InChIKey         InChI                1.06  YASIXTGDNNJPQS-UHFFFAOYSA-N                                                                                                                                              
SJX SMILES_CANONICAL CACTVS               3.385 "CNc1ncc2C=C(C(=O)N(CCCCN)c2n1)c3ccc(cc3Cl)c4cccc(C)n4"                                                                                                                  
SJX SMILES           CACTVS               3.385 "CNc1ncc2C=C(C(=O)N(CCCCN)c2n1)c3ccc(cc3Cl)c4cccc(C)n4"                                                                                                                  
SJX SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "Cc1cccc(n1)c2ccc(c(c2)Cl)C3=Cc4cnc(nc4N(C3=O)CCCCN)NC"                                                                                                                  
SJX SMILES           "OpenEye OEToolkits" 2.0.7 "Cc1cccc(n1)c2ccc(c(c2)Cl)C3=Cc4cnc(nc4N(C3=O)CCCCN)NC"                                                                                                                  
# 
_pdbx_chem_comp_identifier.comp_id           SJX 
_pdbx_chem_comp_identifier.type              "SYSTEMATIC NAME" 
_pdbx_chem_comp_identifier.program           "OpenEye OEToolkits" 
_pdbx_chem_comp_identifier.program_version   2.0.7 
_pdbx_chem_comp_identifier.identifier        "8-(4-azanylbutyl)-6-[2-chloranyl-4-(6-methylpyridin-2-yl)phenyl]-2-(methylamino)pyrido[2,3-d]pyrimidin-7-one" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
SJX "Create component" 2022-12-15 PDBE 
SJX "Initial release"  2023-01-18 RCSB 
SJX "Modify formula"   2023-05-15 PDBE 
# 
