data_R1X
#

_chem_comp.id                                   R1X
_chem_comp.name                                 "1,4-anhydro-D-ribitol"
_chem_comp.type                                 D-saccharide
_chem_comp.pdbx_type                            ATOMS
_chem_comp.formula                              "C5 H10 O4"
_chem_comp.mon_nstd_parent_comp_id              ?
_chem_comp.pdbx_synonyms                        1-deoxyribose
_chem_comp.pdbx_formal_charge                   0
_chem_comp.pdbx_initial_date                    2008-10-03
_chem_comp.pdbx_modified_date                   2020-07-17
_chem_comp.pdbx_ambiguous_flag                  N
_chem_comp.pdbx_release_status                  REL
_chem_comp.pdbx_replaced_by                     ?
_chem_comp.pdbx_replaces                        ?
_chem_comp.formula_weight                       134.130
_chem_comp.one_letter_code                      ?
_chem_comp.three_letter_code                    R1X
_chem_comp.pdbx_model_coordinates_details       ?
_chem_comp.pdbx_model_coordinates_missing_flag  N
_chem_comp.pdbx_ideal_coordinates_details       Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag  N
_chem_comp.pdbx_model_coordinates_db_code       3ENZ
_chem_comp.pdbx_subcomponent_list               ?
_chem_comp.pdbx_processing_site                 RCSB
#
_pdbx_chem_comp_synonyms.ordinal     1
_pdbx_chem_comp_synonyms.comp_id     R1X
_pdbx_chem_comp_synonyms.name        1-deoxyribose
_pdbx_chem_comp_synonyms.provenance  PDB
_pdbx_chem_comp_synonyms.type        ?
#   #
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
R1X  O2      "O2'"   O  0  1  N  N  N  55.019  25.335  23.207   2.761   0.071   0.234  O2      R1X   1  
R1X  C2      "C2'"   C  0  1  N  N  S  55.295  26.077  24.380   1.414   0.398   0.582  C2      R1X   2  
R1X  C3      "C3'"   C  0  1  N  N  S  54.071  26.712  25.134   0.466  -0.795   0.305  C3      R1X   3  
R1X  O3      "O3'"   O  0  1  N  N  N  52.902  27.154  24.337   1.060  -1.698  -0.630  O3      R1X   4  
R1X  C1      "C1'"   C  0  1  N  N  N  56.334  27.196  24.088   0.848   1.488  -0.362  C1      R1X   5  
R1X  O4      "O4'"   O  0  1  N  N  N  55.907  28.235  25.015  -0.580   1.277  -0.303  O4      R1X   6  
R1X  C4      "C4'"   C  0  1  N  N  R  54.728  27.940  25.769  -0.794  -0.145  -0.298  C4      R1X   7  
R1X  C5      "C5'"   C  0  1  N  N  N  55.060  27.743  27.250  -2.015  -0.484   0.558  C5      R1X   8  
R1X  O5      "O5'"   O  0  1  N  N  N  55.549  28.937  27.895  -3.194   0.025  -0.070  O5      R1X   9  
R1X  HO2     "HO2'"  H  0  1  N  Y  N  54.957  25.926  22.465   3.392   0.786   0.390  HO2     R1X  10  
R1X  H2      "H2'"   H  0  1  N  N  N  55.685  25.311  25.066   1.349   0.712   1.624  H2      R1X  11  
R1X  H3      "H3'"   H  0  1  N  N  N  53.615  25.955  25.789   0.222  -1.312   1.233  H3      R1X  12  
R1X  HO3     "HO3'"  H  0  1  N  Y  N  52.147  27.249  24.906   1.888  -2.093  -0.324  HO3     R1X  13  
R1X  H1      "H1'"   H  0  1  N  N  N  57.366  26.866  24.279   1.104   2.483   0.003  H1      R1X  14  
R1X  "H1'A"  "H1'A"  H  0  0  N  N  N  56.359  27.519  23.037   1.215   1.344  -1.378  "H1'A"  R1X  15  
R1X  H4      "H4'"   H  0  1  N  N  N  54.019  28.780  25.739  -0.943  -0.501  -1.317  H4      R1X  16  
R1X  H51     "H5'"   H  0  1  N  N  N  54.142  27.426  27.767  -2.097  -1.566   0.663  H51     R1X  17  
R1X  H52     "H5'A"  H  0  1  N  N  N  55.861  26.991  27.307  -1.905  -0.031   1.544  H52     R1X  18  
R1X  HO5     "HO5'"  H  0  1  N  Y  N  55.657  28.774  28.825  -4.008  -0.154   0.419  HO5     R1X  19  
#   #
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
R1X  O2  C2      SING  N  N   1  
R1X  O2  HO2     SING  N  N   2  
R1X  C1  C2      SING  N  N   3  
R1X  C2  C3      SING  N  N   4  
R1X  C2  H2      SING  N  N   5  
R1X  O3  C3      SING  N  N   6  
R1X  C3  C4      SING  N  N   7  
R1X  C3  H3      SING  N  N   8  
R1X  O3  HO3     SING  N  N   9  
R1X  C1  O4      SING  N  N  10  
R1X  C1  H1      SING  N  N  11  
R1X  C1  "H1'A"  SING  N  N  12  
R1X  O4  C4      SING  N  N  13  
R1X  C4  C5      SING  N  N  14  
R1X  C4  H4      SING  N  N  15  
R1X  C5  O5      SING  N  N  16  
R1X  C5  H51     SING  N  N  17  
R1X  C5  H52     SING  N  N  18  
R1X  O5  HO5     SING  N  N  19  
#   #
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
R1X  SMILES            ACDLabs               10.04  "OCC1OCC(O)C1O"  
R1X  SMILES_CANONICAL  CACTVS                3.341  "OC[C@H]1OC[C@H](O)[C@@H]1O"  
R1X  SMILES            CACTVS                3.341  "OC[CH]1OC[CH](O)[CH]1O"  
R1X  SMILES_CANONICAL  "OpenEye OEToolkits"  1.5.0  "C1[C@@H]([C@@H]([C@H](O1)CO)O)O"  
R1X  SMILES            "OpenEye OEToolkits"  1.5.0  "C1C(C(C(O1)CO)O)O"  
R1X  InChI             InChI                 1.03   "InChI=1S/C5H10O4/c6-1-4-5(8)3(7)2-9-4/h3-8H,1-2H2/t3-,4+,5-/m0/s1"  
R1X  InChIKey          InChI                 1.03   KZVAAIRBJJYZOW-LMVFSUKVSA-N  
#   #
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
R1X  "SYSTEMATIC NAME"            ACDLabs               10.04  "1,4-anhydro-D-ribitol"  
R1X  "SYSTEMATIC NAME"            "OpenEye OEToolkits"  1.5.0  "(2R,3S,4S)-2-(hydroxymethyl)oxolane-3,4-diol"  
R1X  "IUPAC CARBOHYDRATE SYMBOL"  PDB-CARE              1.0    D-1-deoxy-Ribf  
#   #
loop_
_pdbx_chem_comp_feature.comp_id
_pdbx_chem_comp_feature.type
_pdbx_chem_comp_feature.value
_pdbx_chem_comp_feature.source
_pdbx_chem_comp_feature.support
R1X  "CARBOHYDRATE ISOMER"                  D         PDB  ?  
R1X  "CARBOHYDRATE RING"                    furanose  PDB  ?  
R1X  "CARBOHYDRATE PRIMARY CARBONYL GROUP"  aldose    PDB  ?  
#   #
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
R1X  "Create component"          2008-10-03  RCSB  
R1X  "Modify descriptor"         2011-06-04  RCSB  
R1X  "Other modification"        2020-07-03  RCSB  
R1X  "Modify internal type"      2020-07-17  RCSB  
R1X  "Modify atom id"            2020-07-17  RCSB  
R1X  "Modify component atom id"  2020-07-17  RCSB  
R1X  "Modify leaving atom flag"  2020-07-17  RCSB  
##
