data_NWX
# 
_chem_comp.id                                    NWX 
_chem_comp.name                                  "[[(2~{R},3~{S},4~{R},5~{R})-5-(4-azanylpyrrolo[2,1-f][1,2,4]triazin-7-yl)-5-cyano-3,4-bis(oxidanyl)oxolan-2-yl]methoxy-oxidanyl-phosphoryl] phosphono hydrogen phosphate" 
_chem_comp.type                                  non-polymer 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C12 H16 N5 O13 P3" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         "Remdesivir triphosphate" 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2022-04-13 
_chem_comp.pdbx_modified_date                    2022-11-25 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        531.202 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     NWX 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        7UO4 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  RCSB 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
NWX P17 P1  P 0 1 N N N 212.476 204.299 210.820 1.855  -1.234 -1.295 P17 NWX 1  
NWX P21 P2  P 0 1 N N N 211.870 203.745 213.676 4.431  0.119  -0.734 P21 NWX 2  
NWX P25 P3  P 0 1 N N N 214.340 202.609 214.691 6.412  1.191  1.193  P25 NWX 3  
NWX C01 C1  C 0 1 Y N N 208.575 202.565 207.196 -6.408 0.975  -0.859 C01 NWX 4  
NWX C02 C2  C 0 1 Y N N 207.291 202.778 206.647 -5.542 1.980  -0.475 C02 NWX 5  
NWX C03 C3  C 0 1 Y N N 206.443 202.169 205.699 -5.573 3.390  -0.575 C03 NWX 6  
NWX N04 N1  N 0 1 Y N N 205.226 202.661 205.407 -4.559 4.093  -0.098 N04 NWX 7  
NWX C05 C4  C 0 1 Y N N 204.843 203.775 206.065 -3.510 3.504  0.475  C05 NWX 8  
NWX N06 N2  N 0 1 Y N N 205.545 204.462 206.992 -3.419 2.209  0.599  N06 NWX 9  
NWX N07 N3  N 0 1 Y N N 206.755 203.937 207.255 -4.447 1.384  0.121  N07 NWX 10 
NWX C08 C5  C 0 1 Y N N 207.679 204.434 208.161 -4.627 0.050  0.108  C08 NWX 11 
NWX C09 C6  C 0 1 Y N N 208.787 203.584 208.109 -5.817 -0.233 -0.484 C09 NWX 12 
NWX C10 C7  C 0 1 N N R 207.441 205.695 209.006 -3.663 -0.967 0.663  C10 NWX 13 
NWX C11 C8  C 0 1 N N R 206.701 205.421 210.343 -4.113 -2.396 0.286  C11 NWX 14 
NWX C12 C9  C 0 1 N N S 207.858 205.106 211.294 -2.790 -3.145 0.009  C12 NWX 15 
NWX C13 C10 C 0 1 N N R 208.868 206.142 210.837 -1.698 -2.080 0.252  C13 NWX 16 
NWX O14 O1  O 0 1 N N N 208.741 206.138 209.426 -2.364 -0.815 0.050  O14 NWX 17 
NWX C15 C11 C 0 1 N N N 210.328 205.870 211.202 -0.558 -2.249 -0.754 C15 NWX 18 
NWX O16 O2  O 0 1 N N N 210.945 204.906 210.359 0.493  -1.332 -0.441 O16 NWX 19 
NWX O18 O3  O 0 1 N N N 213.354 205.370 211.422 1.518  -0.722 -2.784 O18 NWX 20 
NWX O19 O4  O 0 1 N N N 212.932 203.328 209.771 2.491  -2.568 -1.364 O19 NWX 21 
NWX O20 O5  O 0 1 N N N 211.933 203.434 212.083 2.860  -0.196 -0.585 O20 NWX 22 
NWX O22 O6  O 0 1 N N N 210.471 203.436 214.116 4.671  1.053  -2.024 O22 NWX 23 
NWX O23 O7  O 0 1 N N N 212.607 205.045 213.940 5.175  -1.150 -0.899 O23 NWX 24 
NWX O24 O8  O 0 1 N N N 212.790 202.502 214.165 4.954  0.881  0.584  O24 NWX 25 
NWX O26 O9  O 0 1 N N N 214.311 202.175 216.140 7.053  2.457  0.432  O26 NWX 26 
NWX O27 O10 O 0 1 N N N 214.788 204.058 214.528 6.279  1.520  2.763  O27 NWX 27 
NWX O28 O11 O 0 1 N N N 215.186 201.644 213.884 7.285  0.010  1.008  O28 NWX 28 
NWX O29 O12 O 0 1 N N N 207.559 205.192 212.680 -2.635 -4.238 0.917  O29 NWX 29 
NWX O30 O13 O 0 1 N N N 205.886 206.498 210.813 -4.815 -3.003 1.373  O30 NWX 30 
NWX C31 C12 C 0 1 N N N 206.883 206.822 208.222 -3.559 -0.829 2.125  C31 NWX 31 
NWX N32 N4  N 0 1 N N N 206.446 207.706 207.606 -3.478 -0.722 3.253  N32 NWX 32 
NWX N33 N5  N 0 1 N N N 206.807 201.024 205.006 -6.647 4.025  -1.164 N33 NWX 33 
NWX H1  H1  H 0 1 N N N 209.257 201.764 206.952 -7.361 1.099  -1.351 H1  NWX 34 
NWX H2  H2  H 0 1 N N N 203.864 204.161 205.823 -2.707 4.121  0.849  H2  NWX 35 
NWX H3  H3  H 0 1 N N N 209.684 203.705 208.699 -6.233 -1.218 -0.635 H3  NWX 36 
NWX H4  H4  H 0 1 N N N 206.091 204.514 210.221 -4.737 -2.376 -0.607 H4  NWX 37 
NWX H5  H5  H 0 1 N N N 208.246 204.105 211.054 -2.760 -3.499 -1.021 H5  NWX 38 
NWX H6  H6  H 0 1 N N N 208.580 207.123 211.243 -1.317 -2.152 1.271  H6  NWX 39 
NWX H7  H7  H 0 1 N N N 210.367 205.504 212.239 -0.177 -3.269 -0.705 H7  NWX 40 
NWX H8  H8  H 0 1 N N N 210.889 206.813 211.124 -0.927 -2.047 -1.760 H8  NWX 41 
NWX H9  H9  H 0 1 N N N 213.216 205.402 212.361 1.098  0.149  -2.815 H9  NWX 42 
NWX H10 H10 H 0 1 N N N 210.115 204.180 214.587 4.212  1.903  -1.985 H10 NWX 43 
NWX H11 H11 H 0 1 N N N 214.830 201.386 216.245 6.532  3.268  0.510  H11 NWX 44 
NWX H12 H12 H 0 1 N N N 214.041 204.596 214.292 7.121  1.717  3.196  H12 NWX 45 
NWX H13 H13 H 0 1 N N N 208.335 204.980 213.186 -3.329 -4.908 0.849  H13 NWX 46 
NWX H14 H14 H 0 1 N N N 205.472 206.249 211.631 -5.120 -3.902 1.191  H14 NWX 47 
NWX H15 H15 H 0 1 N N N 206.067 200.759 204.387 -7.387 3.504  -1.513 H15 NWX 48 
NWX H16 H16 H 0 1 N N N 207.636 201.204 204.476 -6.662 4.993  -1.230 H16 NWX 49 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
NWX N33 C03 SING N N 1  
NWX N04 C03 DOUB Y N 2  
NWX N04 C05 SING Y N 3  
NWX C03 C02 SING Y N 4  
NWX C05 N06 DOUB Y N 5  
NWX C02 C01 DOUB Y N 6  
NWX C02 N07 SING Y N 7  
NWX N06 N07 SING Y N 8  
NWX C01 C09 SING Y N 9  
NWX N07 C08 SING Y N 10 
NWX N32 C31 TRIP N N 11 
NWX C09 C08 DOUB Y N 12 
NWX C08 C10 SING N N 13 
NWX C31 C10 SING N N 14 
NWX C10 O14 SING N N 15 
NWX C10 C11 SING N N 16 
NWX O14 C13 SING N N 17 
NWX O19 P17 DOUB N N 18 
NWX C11 O30 SING N N 19 
NWX C11 C12 SING N N 20 
NWX O16 P17 SING N N 21 
NWX O16 C15 SING N N 22 
NWX P17 O18 SING N N 23 
NWX P17 O20 SING N N 24 
NWX C13 C15 SING N N 25 
NWX C13 C12 SING N N 26 
NWX C12 O29 SING N N 27 
NWX O20 P21 SING N N 28 
NWX P21 O23 DOUB N N 29 
NWX P21 O22 SING N N 30 
NWX P21 O24 SING N N 31 
NWX O28 P25 DOUB N N 32 
NWX O24 P25 SING N N 33 
NWX O27 P25 SING N N 34 
NWX P25 O26 SING N N 35 
NWX C01 H1  SING N N 36 
NWX C05 H2  SING N N 37 
NWX C09 H3  SING N N 38 
NWX C11 H4  SING N N 39 
NWX C12 H5  SING N N 40 
NWX C13 H6  SING N N 41 
NWX C15 H7  SING N N 42 
NWX C15 H8  SING N N 43 
NWX O18 H9  SING N N 44 
NWX O22 H10 SING N N 45 
NWX O26 H11 SING N N 46 
NWX O27 H12 SING N N 47 
NWX O29 H13 SING N N 48 
NWX O30 H14 SING N N 49 
NWX N33 H15 SING N N 50 
NWX N33 H16 SING N N 51 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
NWX InChI            InChI                1.03  "InChI=1S/C12H16N5O13P3/c13-4-12(8-2-1-6-11(14)15-5-16-17(6)8)10(19)9(18)7(28-12)3-27-32(23,24)30-33(25,26)29-31(20,21)22/h1-2,5,7,9-10,18-19H,3H2,(H,23,24)(H,25,26)(H2,14,15,16)(H2,20,21,22)/t7-,9-,10-,12+/m1/s1" 
NWX InChIKey         InChI                1.03  DFVPCNAMNAPBCX-LTGWCKQJSA-N                                                                                                                                                                                           
NWX SMILES_CANONICAL CACTVS               3.385 "Nc1ncnn2c1ccc2[C@@]3(O[C@H](CO[P](O)(=O)O[P](O)(=O)O[P](O)(O)=O)[C@@H](O)[C@H]3O)C#N"                                                                                                                                
NWX SMILES           CACTVS               3.385 "Nc1ncnn2c1ccc2[C]3(O[CH](CO[P](O)(=O)O[P](O)(=O)O[P](O)(O)=O)[CH](O)[CH]3O)C#N"                                                                                                                                      
NWX SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "c1cc(n2c1c(ncn2)N)[C@]3([C@@H]([C@@H]([C@H](O3)COP(=O)(O)OP(=O)(O)OP(=O)(O)O)O)O)C#N"                                                                                                                                
NWX SMILES           "OpenEye OEToolkits" 2.0.7 "c1cc(n2c1c(ncn2)N)C3(C(C(C(O3)COP(=O)(O)OP(=O)(O)OP(=O)(O)O)O)O)C#N"                                                                                                                                                 
# 
_pdbx_chem_comp_identifier.comp_id           NWX 
_pdbx_chem_comp_identifier.type              "SYSTEMATIC NAME" 
_pdbx_chem_comp_identifier.program           "OpenEye OEToolkits" 
_pdbx_chem_comp_identifier.program_version   2.0.7 
_pdbx_chem_comp_identifier.identifier        "[[(2~{R},3~{S},4~{R},5~{R})-5-(4-azanylpyrrolo[2,1-f][1,2,4]triazin-7-yl)-5-cyano-3,4-bis(oxidanyl)oxolan-2-yl]methoxy-oxidanyl-phosphoryl] phosphono hydrogen phosphate" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
NWX "Create component" 2022-04-13 RCSB 
NWX "Modify synonyms"  2022-04-15 RCSB 
NWX "Initial release"  2022-11-30 RCSB 
# 
