data_H6X
#

_chem_comp.id                                   H6X
_chem_comp.name                                 "5-[2-(3,5-dimethoxyphenyl)ethyl]-N-[3-methoxy-4-[4-(4-methylpiperazin-1-yl)piperidin-1-yl]phenyl]pyrimidin-2-amine"
_chem_comp.type                                 non-polymer
_chem_comp.pdbx_type                            HETAIN
_chem_comp.formula                              "C31 H42 N6 O3"
_chem_comp.mon_nstd_parent_comp_id              ?
_chem_comp.pdbx_synonyms                        ?
_chem_comp.pdbx_formal_charge                   0
_chem_comp.pdbx_initial_date                    2020-11-20
_chem_comp.pdbx_modified_date                   2021-01-29
_chem_comp.pdbx_ambiguous_flag                  N
_chem_comp.pdbx_release_status                  REL
_chem_comp.pdbx_replaced_by                     ?
_chem_comp.pdbx_replaces                        ?
_chem_comp.formula_weight                       546.704
_chem_comp.one_letter_code                      ?
_chem_comp.three_letter_code                    H6X
_chem_comp.pdbx_model_coordinates_details       ?
_chem_comp.pdbx_model_coordinates_missing_flag  N
_chem_comp.pdbx_ideal_coordinates_details       Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag  N
_chem_comp.pdbx_model_coordinates_db_code       7DHL
_chem_comp.pdbx_subcomponent_list               ?
_chem_comp.pdbx_processing_site                 PDBJ
#   #
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
H6X  C1   C1   C  0  1  N  N  N   -1.411  -2.227  14.146   -5.783  -0.343  -0.750  C1   H6X   1  
H6X  C2   C2   C  0  1  Y  N  N   -0.704  -3.505  14.453   -7.094   0.373  -0.547  C2   H6X   2  
H6X  C3   C3   C  0  1  Y  N  N   -1.371  -4.737  14.537   -7.115   1.748  -0.411  C3   H6X   3  
H6X  C4   C4   C  0  1  Y  N  N   -0.668  -5.921  14.795   -8.320   2.409  -0.224  C4   H6X   4  
H6X  C5   C5   C  0  1  Y  N  N    0.711  -5.887  14.963   -9.504   1.690  -0.174  C5   H6X   5  
H6X  C6   C6   C  0  1  Y  N  N    1.376  -4.662  14.883   -9.480   0.311  -0.312  C6   H6X   6  
H6X  C7   C7   C  0  1  Y  N  N    0.676  -3.480  14.639   -8.273  -0.346  -0.504  C7   H6X   7  
H6X  O8   O1   O  0  1  N  N  N   -1.357  -7.134  14.870   -8.340   3.762  -0.089  O8   H6X   8  
H6X  O9   O2   O  0  1  N  N  N    2.755  -4.574  15.061  -10.639  -0.397  -0.263  O9   H6X   9  
H6X  C10  C8   C  0  1  N  N  N    3.320  -5.871  15.088  -11.845   0.344  -0.067  C10  H6X  10  
H6X  C11  C9   C  0  1  N  N  N   -0.445  -8.234  14.898   -9.616   4.376   0.101  C11  H6X  11  
H6X  N12  N1   N  0  1  N  N  N   -4.616   3.339  14.916   -0.352  -3.372  -0.132  N12  H6X  12  
H6X  C13  C10  C  0  1  Y  N  N   -5.124   4.034  13.810    0.853  -2.660  -0.068  C13  H6X  13  
H6X  C14  C11  C  0  1  Y  N  N   -4.860   3.616  12.506    0.977  -1.583   0.800  C14  H6X  14  
H6X  C15  C12  C  0  1  Y  N  N   -5.394   4.339  11.432    2.170  -0.883   0.866  C15  H6X  15  
H6X  C16  C13  C  0  1  Y  N  N   -6.198   5.493  11.635    3.243  -1.261   0.062  C16  H6X  16  
H6X  C17  C14  C  0  1  Y  N  N   -6.453   5.915  12.943    3.114  -2.336  -0.804  C17  H6X  17  
H6X  C18  C15  C  0  1  Y  N  N   -5.922   5.175  14.006    1.923  -3.034  -0.869  C18  H6X  18  
H6X  N19  N2   N  0  1  N  N  N   -6.782   6.277  10.620    4.451  -0.553   0.127  N19  H6X  19  
H6X  C20  C16  C  0  1  N  N  N   -7.588   7.459  10.985    4.285   0.819  -0.370  C20  H6X  20  
H6X  C21  C17  C  0  1  N  N  N   -7.743   8.435   9.804    5.581   1.603  -0.149  C21  H6X  21  
H6X  C22  C18  C  0  1  N  N  N   -8.355   7.757   8.562    6.725   0.907  -0.891  C22  H6X  22  
H6X  C23  C19  C  0  1  N  N  N   -7.821   6.335   8.298    6.846  -0.535  -0.390  C23  H6X  23  
H6X  C24  C20  C  0  1  N  N  N   -6.621   5.951   9.180    5.513  -1.257  -0.604  C24  H6X  24  
H6X  N25  N3   N  0  1  N  N  N   -8.467   8.700   7.376    7.983   1.623  -0.637  N25  H6X  25  
H6X  C26  C21  C  0  1  N  N  N   -9.832   9.364   7.235    9.055   1.132  -1.514  C26  H6X  26  
H6X  C27  C22  C  0  1  N  N  N  -10.410   9.292   5.820   10.323   1.955  -1.275  C27  H6X  27  
H6X  N28  N4   N  0  1  N  N  N  -10.070   7.995   5.108   10.713   1.850   0.139  N28  H6X  28  
H6X  C29  C23  C  0  1  N  N  N   -8.604   7.602   5.080    9.640   2.341   1.015  C29  H6X  29  
H6X  C30  C24  C  0  1  N  N  N   -7.742   8.376   6.075    8.372   1.518   0.776  C30  H6X  30  
H6X  C31  C25  C  0  1  N  N  N  -11.021   6.871   5.325   11.083   0.470   0.481  C31  H6X  31  
H6X  C32  C26  C  0  1  Y  N  N   -3.111   0.358  16.119   -2.693  -0.735   0.356  C32  H6X  32  
H6X  N33  N5   N  0  1  Y  N  N   -3.923   1.326  13.735   -2.678  -3.418   0.093  N33  H6X  33  
H6X  C34  C27  C  0  1  Y  N  N   -4.058   2.047  14.880   -1.556  -2.714   0.054  C34  H6X  34  
H6X  N35  N6   N  0  1  Y  N  N   -3.656   1.591  16.088   -1.559  -1.395   0.182  N35  H6X  35  
H6X  C36  C28  C  0  1  Y  N  N   -2.942  -0.453  15.017   -3.885  -1.441   0.408  C36  H6X  36  
H6X  C37  C29  C  0  1  Y  N  N   -3.367   0.083  13.815   -3.845  -2.820   0.269  C37  H6X  37  
H6X  C38  C30  C  0  1  N  N  N   -2.331  -1.796  15.238   -5.195  -0.725   0.610  C38  H6X  38  
H6X  O39  O3   O  0  1  N  N  N   -5.079   3.844  10.164    2.294   0.172   1.716  O39  H6X  39  
H6X  C40  C31  C  0  1  N  N  N   -3.746   3.300  10.198    1.153   0.502   2.511  C40  H6X  40  
H6X  H1   H1   H  0  1  N  N  N   -0.660  -1.439  13.989   -5.949  -1.245  -1.340  H1   H6X  41  
H6X  H2   H2   H  0  1  N  N  N   -1.998  -2.363  13.226   -5.089   0.312  -1.275  H2   H6X  42  
H6X  H3   H3   H  0  1  N  N  N   -2.442  -4.773  14.401   -6.192   2.308  -0.450  H3   H6X  43  
H6X  H4   H4   H  0  1  N  N  N    1.261  -6.797  15.153  -10.443   2.203  -0.028  H4   H6X  44  
H6X  H5   H5   H  0  1  N  N  N    1.207  -2.541  14.594   -8.255  -1.420  -0.615  H5   H6X  45  
H6X  H6   H6   H  0  1  N  N  N    4.408  -5.795  15.229  -11.791   0.883   0.879  H6   H6X  46  
H6X  H7   H7   H  0  1  N  N  N    2.882  -6.444  15.919  -11.970   1.056  -0.884  H7   H6X  47  
H6X  H8   H8   H  0  1  N  N  N    3.108  -6.383  14.138  -12.693  -0.340  -0.048  H8   H6X  48  
H6X  H9   H9   H  0  1  N  N  N   -1.009  -9.177  14.957  -10.255   4.158  -0.755  H9   H6X  49  
H6X  H10  H10  H  0  1  N  N  N    0.165  -8.228  13.982  -10.076   3.985   1.008  H10  H6X  50  
H6X  H11  H11  H  0  1  N  N  N    0.211  -8.144  15.776   -9.489   5.455   0.194  H11  H6X  51  
H6X  H12  H12  H  0  1  N  N  N   -4.653   3.799  15.803   -0.343  -4.326  -0.306  H12  H6X  52  
H6X  H13  H13  H  0  1  N  N  N   -4.250   2.743  12.326    0.144  -1.292   1.423  H13  H6X  53  
H6X  H14  H14  H  0  1  N  N  N   -7.049   6.796  13.130    3.946  -2.629  -1.428  H14  H6X  54  
H6X  H15  H15  H  0  1  N  N  N   -6.134   5.493  15.016    1.826  -3.874  -1.541  H15  H6X  55  
H6X  H16  H16  H  0  1  N  N  N   -7.095   7.983  11.817    4.052   0.795  -1.434  H16  H6X  56  
H6X  H17  H17  H  0  1  N  N  N   -8.586   7.124  11.303    3.471   1.304   0.169  H17  H6X  57  
H6X  H18  H18  H  0  1  N  N  N   -6.751   8.830   9.539    5.463   2.617  -0.532  H18  H6X  58  
H6X  H19  H19  H  0  1  N  N  N   -8.397   9.264  10.113    5.807   1.640   0.916  H19  H6X  59  
H6X  H20  H20  H  0  1  N  N  N   -9.401   7.586   8.855    6.517   0.905  -1.961  H20  H6X  60  
H6X  H21  H21  H  0  1  N  N  N   -8.634   5.618   8.487    7.631  -1.048  -0.945  H21  H6X  61  
H6X  H22  H22  H  0  1  N  N  N   -7.512   6.270   7.244    7.092  -0.532   0.672  H22  H6X  62  
H6X  H23  H23  H  0  1  N  N  N   -6.462   4.866   9.090    5.591  -2.279  -0.235  H23  H6X  63  
H6X  H24  H24  H  0  1  N  N  N   -5.735   6.484   8.805    5.274  -1.271  -1.667  H24  H6X  64  
H6X  H26  H26  H  0  1  N  N  N   -9.733  10.423   7.516    9.254   0.084  -1.293  H26  H6X  65  
H6X  H27  H27  H  0  1  N  N  N  -10.533   8.866   7.922    8.748   1.232  -2.555  H27  H6X  66  
H6X  H28  H28  H  0  1  N  N  N  -10.007  10.131   5.233   11.128   1.574  -1.903  H28  H6X  67  
H6X  H29  H29  H  0  1  N  N  N  -11.505   9.381   5.883   10.131   2.999  -1.523  H29  H6X  68  
H6X  H31  H31  H  0  1  N  N  N   -8.527   6.530   5.314    9.948   2.241   2.056  H31  H6X  69  
H6X  H32  H32  H  0  1  N  N  N   -8.215   7.785   4.068    9.441   3.389   0.794  H32  H6X  70  
H6X  H33  H33  H  0  1  N  N  N   -6.854   7.772   6.311    7.567   1.899   1.404  H33  H6X  71  
H6X  H34  H34  H  0  1  N  N  N   -7.429   9.320   5.605    8.564   0.474   1.023  H34  H6X  72  
H6X  H35  H35  H  0  1  N  N  N  -12.051   7.257   5.329   11.923   0.155  -0.138  H35  H6X  73  
H6X  H36  H36  H  0  1  N  N  N  -10.909   6.134   4.516   11.367   0.420   1.532  H36  H6X  74  
H6X  H37  H37  H  0  1  N  N  N  -10.806   6.390   6.291   10.233  -0.189   0.303  H37  H6X  75  
H6X  H38  H38  H  0  1  N  N  N   -2.783  -0.021  17.076   -2.689   0.339   0.460  H38  H6X  76  
H6X  H39  H39  H  0  1  N  N  N   -3.255  -0.500  12.913   -4.756  -3.399   0.301  H39  H6X  77  
H6X  H40  H40  H  0  1  N  N  N   -3.141  -2.536  15.321   -5.029   0.176   1.200  H40  H6X  78  
H6X  H41  H41  H  0  1  N  N  N   -1.762  -1.767  16.179   -5.890  -1.380   1.135  H41  H6X  79  
H6X  H42  H42  H  0  1  N  N  N   -3.485   2.906   9.205    0.315   0.748   1.859  H42  H6X  80  
H6X  H43  H43  H  0  1  N  N  N   -3.034   4.091  10.478    0.889  -0.349   3.138  H43  H6X  81  
H6X  H44  H44  H  0  1  N  N  N   -3.700   2.487  10.938    1.387   1.360   3.142  H44  H6X  82  
#   #
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
H6X  C29  N28  SING  N  N   1  
H6X  C29  C30  SING  N  N   2  
H6X  N28  C31  SING  N  N   3  
H6X  N28  C27  SING  N  N   4  
H6X  C27  C26  SING  N  N   5  
H6X  C30  N25  SING  N  N   6  
H6X  C26  N25  SING  N  N   7  
H6X  N25  C22  SING  N  N   8  
H6X  C23  C22  SING  N  N   9  
H6X  C23  C24  SING  N  N  10  
H6X  C22  C21  SING  N  N  11  
H6X  C24  N19  SING  N  N  12  
H6X  C21  C20  SING  N  N  13  
H6X  O39  C40  SING  N  N  14  
H6X  O39  C15  SING  N  N  15  
H6X  N19  C20  SING  N  N  16  
H6X  N19  C16  SING  N  N  17  
H6X  C15  C16  DOUB  Y  N  18  
H6X  C15  C14  SING  Y  N  19  
H6X  C16  C17  SING  Y  N  20  
H6X  C14  C13  DOUB  Y  N  21  
H6X  C17  C18  DOUB  Y  N  22  
H6X  N33  C37  DOUB  Y  N  23  
H6X  N33  C34  SING  Y  N  24  
H6X  C13  C18  SING  Y  N  25  
H6X  C13  N12  SING  N  N  26  
H6X  C37  C36  SING  Y  N  27  
H6X  C1   C2   SING  N  N  28  
H6X  C1   C38  SING  N  N  29  
H6X  C2   C3   DOUB  Y  N  30  
H6X  C2   C7   SING  Y  N  31  
H6X  C3   C4   SING  Y  N  32  
H6X  C7   C6   DOUB  Y  N  33  
H6X  C4   O8   SING  N  N  34  
H6X  C4   C5   DOUB  Y  N  35  
H6X  O8   C11  SING  N  N  36  
H6X  C34  N12  SING  N  N  37  
H6X  C34  N35  DOUB  Y  N  38  
H6X  C6   C5   SING  Y  N  39  
H6X  C6   O9   SING  N  N  40  
H6X  C36  C38  SING  N  N  41  
H6X  C36  C32  DOUB  Y  N  42  
H6X  O9   C10  SING  N  N  43  
H6X  N35  C32  SING  Y  N  44  
H6X  C1   H1   SING  N  N  45  
H6X  C1   H2   SING  N  N  46  
H6X  C3   H3   SING  N  N  47  
H6X  C5   H4   SING  N  N  48  
H6X  C7   H5   SING  N  N  49  
H6X  C10  H6   SING  N  N  50  
H6X  C10  H7   SING  N  N  51  
H6X  C10  H8   SING  N  N  52  
H6X  C11  H9   SING  N  N  53  
H6X  C11  H10  SING  N  N  54  
H6X  C11  H11  SING  N  N  55  
H6X  N12  H12  SING  N  N  56  
H6X  C14  H13  SING  N  N  57  
H6X  C17  H14  SING  N  N  58  
H6X  C18  H15  SING  N  N  59  
H6X  C20  H16  SING  N  N  60  
H6X  C20  H17  SING  N  N  61  
H6X  C21  H18  SING  N  N  62  
H6X  C21  H19  SING  N  N  63  
H6X  C22  H20  SING  N  N  64  
H6X  C23  H21  SING  N  N  65  
H6X  C23  H22  SING  N  N  66  
H6X  C24  H23  SING  N  N  67  
H6X  C24  H24  SING  N  N  68  
H6X  C26  H26  SING  N  N  69  
H6X  C26  H27  SING  N  N  70  
H6X  C27  H28  SING  N  N  71  
H6X  C27  H29  SING  N  N  72  
H6X  C29  H31  SING  N  N  73  
H6X  C29  H32  SING  N  N  74  
H6X  C30  H33  SING  N  N  75  
H6X  C30  H34  SING  N  N  76  
H6X  C31  H35  SING  N  N  77  
H6X  C31  H36  SING  N  N  78  
H6X  C31  H37  SING  N  N  79  
H6X  C32  H38  SING  N  N  80  
H6X  C37  H39  SING  N  N  81  
H6X  C38  H40  SING  N  N  82  
H6X  C38  H41  SING  N  N  83  
H6X  C40  H42  SING  N  N  84  
H6X  C40  H43  SING  N  N  85  
H6X  C40  H44  SING  N  N  86  
#   #
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
H6X  InChI             InChI                 1.03   "InChI=1S/C31H42N6O3/c1-35-13-15-36(16-14-35)26-9-11-37(12-10-26)29-8-7-25(19-30(29)40-4)34-31-32-21-24(22-33-31)6-5-23-17-27(38-2)20-28(18-23)39-3/h7-8,17-22,26H,5-6,9-16H2,1-4H3,(H,32,33,34)"  
H6X  InChIKey          InChI                 1.03   KTAFHTVOQVOCCA-UHFFFAOYSA-N  
H6X  SMILES_CANONICAL  CACTVS                3.385  "COc1cc(CCc2cnc(Nc3ccc(N4CCC(CC4)N5CCN(C)CC5)c(OC)c3)nc2)cc(OC)c1"  
H6X  SMILES            CACTVS                3.385  "COc1cc(CCc2cnc(Nc3ccc(N4CCC(CC4)N5CCN(C)CC5)c(OC)c3)nc2)cc(OC)c1"  
H6X  SMILES_CANONICAL  "OpenEye OEToolkits"  2.0.7  "CN1CCN(CC1)C2CCN(CC2)c3ccc(cc3OC)Nc4ncc(cn4)CCc5cc(cc(c5)OC)OC"  
H6X  SMILES            "OpenEye OEToolkits"  2.0.7  "CN1CCN(CC1)C2CCN(CC2)c3ccc(cc3OC)Nc4ncc(cn4)CCc5cc(cc(c5)OC)OC"  
#
_pdbx_chem_comp_identifier.comp_id          H6X
_pdbx_chem_comp_identifier.type             "SYSTEMATIC NAME"
_pdbx_chem_comp_identifier.program          "OpenEye OEToolkits"
_pdbx_chem_comp_identifier.program_version  2.0.7
_pdbx_chem_comp_identifier.identifier       "5-[2-(3,5-dimethoxyphenyl)ethyl]-~{N}-[3-methoxy-4-[4-(4-methylpiperazin-1-yl)piperidin-1-yl]phenyl]pyrimidin-2-amine"
#   #
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
H6X  "Create component"  2020-11-20  PDBJ  
H6X  "Initial release"   2021-02-03  RCSB  
##
