data_GHX
# 
_chem_comp.id                                    GHX 
_chem_comp.name                                  "(phenylmethyl) N-[(2S)-1-oxidanylidene-1-[[(2S)-1-oxidanyl-3-[(3S)-2-oxidanylidenepyrrolidin-3-yl]propan-2-yl]amino]-3-phenyl-propan-2-yl]carbamate" 
_chem_comp.type                                  non-polymer 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C24 H29 N3 O5" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2012-08-13 
_chem_comp.pdbx_modified_date                    2024-09-27 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        439.504 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     GHX 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        5C1X 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  PDBJ 
_chem_comp.pdbx_pcm                              Y 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.pdbx_backbone_atom_flag 
_chem_comp_atom.pdbx_n_terminal_atom_flag 
_chem_comp_atom.pdbx_c_terminal_atom_flag 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
GHX O1  O1  O 0 1 N N N N N N 21.061 -13.438 34.787 6.705  0.472  -1.561 O1  GHX 1  
GHX C34 C1  C 0 1 N N N N N N 22.230 -13.657 35.068 6.188  -0.621 -1.480 C34 GHX 2  
GHX N33 N1  N 0 1 N N N N N N 22.764 -14.795 35.333 6.622  -1.727 -2.109 N33 GHX 3  
GHX C32 C2  C 0 1 N N N N N N 24.193 -14.745 35.608 5.768  -2.882 -1.807 C32 GHX 4  
GHX C31 C3  C 0 1 N N N N N N 24.544 -13.280 35.222 4.964  -2.483 -0.550 C31 GHX 5  
GHX C30 C4  C 0 1 N N S N N N 23.204 -12.540 35.178 4.964  -0.942 -0.650 C30 GHX 6  
GHX C29 C5  C 0 1 N N N N N N 22.984 -11.596 33.975 5.079  -0.313 0.740  C29 GHX 7  
GHX C26 C6  C 0 1 N N S N N N 23.886 -10.392 33.911 3.782  -0.548 1.516  C26 GHX 8  
GHX C27 C7  C 0 1 N N N N N N 23.592 -9.488  32.689 3.941  -0.028 2.946  C27 GHX 9  
GHX O28 O2  O 0 1 N N N N N N 24.611 -8.550  32.884 4.344  1.343  2.912  O28 GHX 10 
GHX N24 N2  N 0 1 N N N N N N 23.781 -9.574  35.130 2.683  0.162  0.857  N24 GHX 11 
GHX C23 C8  C 0 1 N N N N N N 24.749 -9.636  36.074 1.417  -0.278 0.996  C23 GHX 12 
GHX O25 O3  O 0 1 N N N N N N 25.717 -10.372 36.004 1.187  -1.262 1.666  O25 GHX 13 
GHX C15 C9  C 0 1 N N S N N N 24.572 -8.736  37.239 0.287  0.453  0.318  C15 GHX 14 
GHX C16 C10 C 0 1 N N N N N N 25.413 -7.476  36.964 0.235  1.896  0.827  C16 GHX 15 
GHX C17 C11 C 0 1 Y N N N N N 25.223 -6.274  37.866 -0.814 2.660  0.062  C17 GHX 16 
GHX C22 C12 C 0 1 Y N N N N N 26.340 -5.657  38.405 -0.475 3.322  -1.104 C22 GHX 17 
GHX C21 C13 C 0 1 Y N N N N N 26.217 -4.547  39.218 -1.438 4.023  -1.806 C21 GHX 18 
GHX C20 C14 C 0 1 Y N N N N N 24.966 -4.027  39.519 -2.739 4.063  -1.342 C20 GHX 19 
GHX C19 C15 C 0 1 Y N N N N N 23.842 -4.618  38.968 -3.079 3.401  -0.177 C19 GHX 20 
GHX C18 C16 C 0 1 Y N N N N N 23.977 -5.739  38.116 -2.117 2.696  0.522  C18 GHX 21 
GHX N13 N3  N 0 1 N N N N N N 25.004 -9.324  38.503 -0.980 -0.217 0.622  N13 GHX 22 
GHX C12 C17 C 0 1 N N N N N N 24.431 -10.429 38.940 -2.026 -0.095 -0.220 C12 GHX 23 
GHX O14 O4  O 0 1 N N N N N N 23.554 -11.044 38.330 -1.918 0.572  -1.230 O14 GHX 24 
GHX O11 O5  O 0 1 N N N N N N 24.902 -10.976 40.228 -3.190 -0.711 0.059  O11 GHX 25 
GHX C10 C18 C 0 1 N N N N N N 24.435 -12.288 40.615 -4.273 -0.535 -0.892 C10 GHX 26 
GHX C1  C19 C 0 1 Y N N N N N 23.246 -12.207 41.586 -5.487 -1.292 -0.416 C1  GHX 27 
GHX C6  C20 C 0 1 Y N N N N N 22.038 -11.637 41.213 -5.671 -2.609 -0.793 C6  GHX 28 
GHX C5  C21 C 0 1 Y N N N N N 20.949 -11.555 42.092 -6.784 -3.303 -0.357 C5  GHX 29 
GHX C4  C22 C 0 1 Y N N N N N 21.049 -12.045 43.389 -7.713 -2.680 0.456  C4  GHX 30 
GHX C3  C23 C 0 1 Y N N N N N 22.249 -12.645 43.769 -7.527 -1.363 0.834  C3  GHX 31 
GHX C2  C24 C 0 1 Y N N N N N 23.336 -12.719 42.885 -6.412 -0.671 0.401  C2  GHX 32 
GHX H1  H1  H 0 1 N N N N N N 22.240 -15.647 35.349 7.398  -1.757 -2.689 H1  GHX 33 
GHX H2  H2  H 0 1 N N N N N N 24.745 -15.466 34.987 5.093  -3.080 -2.639 H2  GHX 34 
GHX H3  H3  H 0 1 N N N N N N 24.403 -14.940 36.670 6.381  -3.760 -1.602 H3  GHX 35 
GHX H4  H4  H 0 1 N N N N N N 25.034 -13.248 34.238 3.950  -2.880 -0.593 H4  GHX 36 
GHX H5  H5  H 0 1 N N N N N N 25.207 -12.831 35.976 5.471  -2.812 0.358  H5  GHX 37 
GHX H6  H6  H 0 1 N N N N N N 23.051 -11.987 36.116 4.061  -0.595 -1.153 H6  GHX 38 
GHX H7  H7  H 0 1 N N N N N N 21.945 -11.237 34.014 5.912  -0.768 1.276  H7  GHX 39 
GHX H8  H8  H 0 1 N N N N N N 23.136 -12.180 33.056 5.254  0.758  0.641  H8  GHX 40 
GHX H9  H9  H 0 1 N N N N N N 24.923 -10.748 33.818 3.562  -1.616 1.540  H9  GHX 41 
GHX H10 H10 H 0 1 N N N N N N 22.592 -9.032  32.740 2.991  -0.114 3.472  H10 GHX 42 
GHX H11 H11 H 0 1 N N N N N N 23.701 -10.028 31.737 4.698  -0.616 3.464  H11 GHX 43 
GHX H12 H12 H 0 1 N N N N N N 24.576 -7.896  32.196 4.464  1.739  3.785  H12 GHX 44 
GHX H13 H13 H 0 1 N N N N N N 22.994 -8.972  35.261 2.867  0.950  0.321  H13 GHX 45 
GHX H14 H14 H 0 1 N N N N N N 23.515 -8.441  37.312 0.449  0.454  -0.760 H14 GHX 46 
GHX H15 H15 H 0 1 N N N N N N 26.471 -7.770  37.031 -0.015 1.898  1.888  H15 GHX 47 
GHX H16 H16 H 0 1 N N N N N N 25.187 -7.152  35.937 1.207  2.367  0.681  H16 GHX 48 
GHX H17 H17 H 0 1 N N N N N N 27.322 -6.050  38.186 0.542  3.291  -1.466 H17 GHX 49 
GHX H18 H18 H 0 1 N N N N N N 27.102 -4.080  39.623 -1.172 4.541  -2.716 H18 GHX 50 
GHX H19 H19 H 0 1 N N N N N N 24.871 -3.173  40.174 -3.491 4.611  -1.890 H19 GHX 51 
GHX H20 H20 H 0 1 N N N N N N 22.861 -4.223  39.189 -4.096 3.432  0.185  H20 GHX 52 
GHX H21 H21 H 0 1 N N N N N N 23.102 -6.177  37.660 -2.383 2.175  1.430  H21 GHX 53 
GHX H22 H22 H 0 1 N N N N N N 25.731 -8.891  39.036 -1.066 -0.749 1.428  H22 GHX 54 
GHX H23 H23 H 0 1 N N N N N N 24.122 -12.835 39.713 -4.515 0.524  -0.975 H23 GHX 55 
GHX H24 H24 H 0 1 N N N N N N 25.258 -12.829 41.104 -3.967 -0.915 -1.866 H24 GHX 56 
GHX H25 H25 H 0 1 N N N N N N 21.933 -11.243 40.213 -4.946 -3.096 -1.428 H25 GHX 57 
GHX H26 H26 H 0 1 N N N N N N 20.024 -11.107 41.759 -6.929 -4.332 -0.652 H26 GHX 58 
GHX H27 H27 H 0 1 N N N N N N 20.223 -11.964 44.080 -8.583 -3.222 0.796  H27 GHX 59 
GHX H28 H28 H 0 1 N N N N N N 22.343 -13.060 44.762 -8.253 -0.877 1.469  H28 GHX 60 
GHX H29 H29 H 0 1 N N N N N N 24.257 -13.179 43.212 -6.266 0.357  0.699  H29 GHX 61 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
GHX C27 O28 SING N N 1  
GHX C27 C26 SING N N 2  
GHX C26 C29 SING N N 3  
GHX C26 N24 SING N N 4  
GHX C29 C30 SING N N 5  
GHX O1  C34 DOUB N N 6  
GHX C34 C30 SING N N 7  
GHX C34 N33 SING N N 8  
GHX N24 C23 SING N N 9  
GHX C30 C31 SING N N 10 
GHX C31 C32 SING N N 11 
GHX N33 C32 SING N N 12 
GHX O25 C23 DOUB N N 13 
GHX C23 C15 SING N N 14 
GHX C16 C15 SING N N 15 
GHX C16 C17 SING N N 16 
GHX C15 N13 SING N N 17 
GHX C17 C18 DOUB Y N 18 
GHX C17 C22 SING Y N 19 
GHX C18 C19 SING Y N 20 
GHX O14 C12 DOUB N N 21 
GHX C22 C21 DOUB Y N 22 
GHX N13 C12 SING N N 23 
GHX C12 O11 SING N N 24 
GHX C19 C20 DOUB Y N 25 
GHX C21 C20 SING Y N 26 
GHX O11 C10 SING N N 27 
GHX C10 C1  SING N N 28 
GHX C6  C1  DOUB Y N 29 
GHX C6  C5  SING Y N 30 
GHX C1  C2  SING Y N 31 
GHX C5  C4  DOUB Y N 32 
GHX C2  C3  DOUB Y N 33 
GHX C4  C3  SING Y N 34 
GHX N33 H1  SING N N 35 
GHX C32 H2  SING N N 36 
GHX C32 H3  SING N N 37 
GHX C31 H4  SING N N 38 
GHX C31 H5  SING N N 39 
GHX C30 H6  SING N N 40 
GHX C29 H7  SING N N 41 
GHX C29 H8  SING N N 42 
GHX C26 H9  SING N N 43 
GHX C27 H10 SING N N 44 
GHX C27 H11 SING N N 45 
GHX O28 H12 SING N N 46 
GHX N24 H13 SING N N 47 
GHX C15 H14 SING N N 48 
GHX C16 H15 SING N N 49 
GHX C16 H16 SING N N 50 
GHX C22 H17 SING N N 51 
GHX C21 H18 SING N N 52 
GHX C20 H19 SING N N 53 
GHX C19 H20 SING N N 54 
GHX C18 H21 SING N N 55 
GHX N13 H22 SING N N 56 
GHX C10 H23 SING N N 57 
GHX C10 H24 SING N N 58 
GHX C6  H25 SING N N 59 
GHX C5  H26 SING N N 60 
GHX C4  H27 SING N N 61 
GHX C3  H28 SING N N 62 
GHX C2  H29 SING N N 63 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
GHX InChI            InChI                1.03  "InChI=1S/C24H29N3O5/c28-15-20(14-19-11-12-25-22(19)29)26-23(30)21(13-17-7-3-1-4-8-17)27-24(31)32-16-18-9-5-2-6-10-18/h1-10,19-21,28H,11-16H2,(H,25,29)(H,26,30)(H,27,31)/t19-,20-,21-/m0/s1" 
GHX InChIKey         InChI                1.03  SDSQZWABGUFEMG-ACRUOGEOSA-N                                                                                                                                                                   
GHX SMILES_CANONICAL CACTVS               3.385 "OC[C@H](C[C@@H]1CCNC1=O)NC(=O)[C@H](Cc2ccccc2)NC(=O)OCc3ccccc3"                                                                                                                              
GHX SMILES           CACTVS               3.385 "OC[CH](C[CH]1CCNC1=O)NC(=O)[CH](Cc2ccccc2)NC(=O)OCc3ccccc3"                                                                                                                                  
GHX SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "c1ccc(cc1)C[C@@H](C(=O)N[C@@H](C[C@@H]2CCNC2=O)CO)NC(=O)OCc3ccccc3"                                                                                                                          
GHX SMILES           "OpenEye OEToolkits" 2.0.7 "c1ccc(cc1)CC(C(=O)NC(CC2CCNC2=O)CO)NC(=O)OCc3ccccc3"                                                                                                                                         
# 
_pdbx_chem_comp_identifier.comp_id           GHX 
_pdbx_chem_comp_identifier.type              "SYSTEMATIC NAME" 
_pdbx_chem_comp_identifier.program           "OpenEye OEToolkits" 
_pdbx_chem_comp_identifier.program_version   2.0.7 
_pdbx_chem_comp_identifier.identifier        "(phenylmethyl) ~{N}-[(2~{S})-1-oxidanylidene-1-[[(2~{S})-1-oxidanyl-3-[(3~{S})-2-oxidanylidenepyrrolidin-3-yl]propan-2-yl]amino]-3-phenyl-propan-2-yl]carbamate" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
GHX "Create component"  2012-08-13 PDBJ 
GHX "Initial release"   2016-06-01 RCSB 
GHX "Modify descriptor" 2020-08-25 PDBJ 
GHX "Modify formula"    2020-08-25 PDBJ 
GHX "Modify name"       2020-08-25 PDBJ 
GHX "Modify PCM"        2024-09-27 PDBE 
# 
_pdbx_chem_comp_pcm.pcm_id                             1 
_pdbx_chem_comp_pcm.comp_id                            GHX 
_pdbx_chem_comp_pcm.modified_residue_id                CYS 
_pdbx_chem_comp_pcm.type                               None 
_pdbx_chem_comp_pcm.category                           "Covalent chemical modification" 
_pdbx_chem_comp_pcm.position                           "Amino-acid side chain" 
_pdbx_chem_comp_pcm.polypeptide_position               "Any position" 
_pdbx_chem_comp_pcm.comp_id_linking_atom               C27 
_pdbx_chem_comp_pcm.modified_residue_id_linking_atom   SG 
_pdbx_chem_comp_pcm.uniprot_specific_ptm_accession     ? 
_pdbx_chem_comp_pcm.uniprot_generic_ptm_accession      ? 
# 
