data_BMX
#

_chem_comp.id                                   BMX
_chem_comp.name                                 2-acetamido-2-deoxy-6-O-phosphono-alpha-D-mannopyranose
_chem_comp.type                                 "D-saccharide, alpha linking"
_chem_comp.pdbx_type                            ATOMS
_chem_comp.formula                              "C8 H16 N O9 P"
_chem_comp.mon_nstd_parent_comp_id              BM3
_chem_comp.pdbx_synonyms                        
;2-(ACETYLAMINO)-2-DEOXY-6-O-PHOSPHONO-ALPHA-D-MANNOPYRANOSE; N-acetyl-6-O-phosphono-alpha-D-mannosamine;
2-acetamido-2-deoxy-6-O-phosphono-alpha-D-mannose; 2-acetamido-2-deoxy-6-O-phosphono-D-mannose;
2-acetamido-2-deoxy-6-O-phosphono-mannose
;

_chem_comp.pdbx_formal_charge                   0
_chem_comp.pdbx_initial_date                    2011-05-10
_chem_comp.pdbx_modified_date                   2020-07-17
_chem_comp.pdbx_ambiguous_flag                  N
_chem_comp.pdbx_release_status                  REL
_chem_comp.pdbx_replaced_by                     ?
_chem_comp.pdbx_replaces                        ?
_chem_comp.formula_weight                       301.188
_chem_comp.one_letter_code                      ?
_chem_comp.three_letter_code                    BMX
_chem_comp.pdbx_model_coordinates_details       ?
_chem_comp.pdbx_model_coordinates_missing_flag  N
_chem_comp.pdbx_ideal_coordinates_details       Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag  N
_chem_comp.pdbx_model_coordinates_db_code       2YI1
_chem_comp.pdbx_subcomponent_list               ?
_chem_comp.pdbx_processing_site                 EBI
#   #
loop_
_pdbx_chem_comp_synonyms.ordinal
_pdbx_chem_comp_synonyms.comp_id
_pdbx_chem_comp_synonyms.name
_pdbx_chem_comp_synonyms.provenance
_pdbx_chem_comp_synonyms.type
1  BMX  "2-(ACETYLAMINO)-2-DEOXY-6-O-PHOSPHONO-ALPHA-D-MANNOPYRANOSE"  PDB  ?  
2  BMX  N-acetyl-6-O-phosphono-alpha-D-mannosamine                     PDB  ?  
3  BMX  2-acetamido-2-deoxy-6-O-phosphono-alpha-D-mannose              PDB  ?  
4  BMX  2-acetamido-2-deoxy-6-O-phosphono-D-mannose                    PDB  ?  
5  BMX  2-acetamido-2-deoxy-6-O-phosphono-mannose                      PDB  ?  
#   #
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
BMX  C1   C1    C  0  1  N  N  S  31.283  11.565   -7.881  -1.585  -0.466  -1.425  C1   BMX   1  
BMX  C2   C2    C  0  1  N  N  S  30.249  10.976   -8.788  -2.664   0.246  -0.604  C2   BMX   2  
BMX  C3   C3    C  0  1  N  N  R  29.219  10.215   -7.984  -2.161   1.637  -0.210  C3   BMX   3  
BMX  C4   C4    C  0  1  N  N  S  29.931   9.209   -7.086  -0.845   1.492   0.562  C4   BMX   4  
BMX  C5   C5    C  0  1  N  N  R  31.012   9.862   -6.245   0.164   0.733  -0.303  C5   BMX   5  
BMX  C6   C6    C  0  1  N  N  N  31.809   8.930   -5.294   1.461   0.531   0.483  C6   BMX   6  
BMX  C7   C7    C  0  1  N  N  N  30.776   9.959  -11.072  -3.840  -1.545   0.557  C7   BMX   7  
BMX  C8   C8    C  0  1  N  N  N  31.625   8.971  -11.811  -4.137  -2.345   1.799  C8   BMX   8  
BMX  N2   N2    N  0  1  N  N  N  30.960  10.084   -9.654  -2.953  -0.531   0.604  N2   BMX   9  
BMX  O1   O1    O  0  1  N  Y  N  30.754  12.587   -7.097  -1.342   0.265  -2.628  O1   BMX  10  
BMX  O3   O3    O  0  1  N  N  N  28.272   9.622   -8.821  -3.132   2.280   0.618  O3   BMX  11  
BMX  O4   O4    O  0  1  N  N  N  28.955   8.688   -6.253  -0.329   2.788   0.873  O4   BMX  12  
BMX  O5   O5    O  0  1  N  N  N  31.810  10.541   -7.114  -0.380  -0.540  -0.661  O5   BMX  13  
BMX  O6   O6    O  0  1  N  N  N  32.883   8.225   -5.884   2.441  -0.073  -0.362  O6   BMX  14  
BMX  O7   O7    O  0  1  N  N  N  29.946  10.628  -11.668  -4.399  -1.814  -0.485  O7   BMX  15  
BMX  P    P     P  0  1  N  N  N  34.173   7.674   -5.076   3.929  -0.431   0.138  P    BMX  16  
BMX  O19  O19   O  0  1  N  N  N  35.182   7.327   -6.095   4.797  -0.975  -1.104  O19  BMX  17  
BMX  O17  O17   O  0  1  N  N  N  34.734   8.638   -4.113   4.569   0.783   0.692  O17  BMX  18  
BMX  O18  O18   O  0  1  N  N  N  33.736   6.511   -4.246   3.854  -1.566   1.278  O18  BMX  19  
BMX  H1   H1    H  0  1  N  N  N  32.084  12.029   -8.475  -1.921  -1.473  -1.672  H1   BMX  20  
BMX  HO1  HA    H  0  1  N  Y  N  31.434  12.939   -6.534  -0.668  -0.129  -3.198  HO1  BMX  21  
BMX  H2   H2    H  0  1  N  N  N  29.712  11.752   -9.353  -3.571   0.341  -1.201  H2   BMX  22  
BMX  HN2  HB    H  0  1  N  N  N  31.648   9.494   -9.232  -2.506  -0.316   1.437  HN2  BMX  23  
BMX  H3   H3    H  0  1  N  N  N  28.659  10.907   -7.338  -1.995   2.233  -1.107  H3   BMX  24  
BMX  H81  H81C  H  0  1  N  N  N  31.361   8.986  -12.879  -3.450  -3.189   1.861  H81  BMX  25  
BMX  H82  H82C  H  0  1  N  N  N  32.686   9.238  -11.692  -4.012  -1.711   2.678  H82  BMX  26  
BMX  H83  H83C  H  0  1  N  N  N  31.452   7.963  -11.405  -5.162  -2.712   1.759  H83  BMX  27  
BMX  HO3  HC    H  0  1  N  Y  N  27.636   9.150   -8.296  -2.878   3.168   0.905  HO3  BMX  28  
BMX  H4   H4    H  0  1  N  N  N  30.426   8.440   -7.697  -1.024   0.940   1.485  H4   BMX  29  
BMX  HO4  HD    H  0  1  N  Y  N  29.346   8.050   -5.667   0.505   2.772   1.362  HO4  BMX  30  
BMX  H5   H5    H  0  1  N  N  N  30.526  10.529   -5.518   0.372   1.306  -1.207  H5   BMX  31  
BMX  H61  H61C  H  0  1  N  N  N  32.227   9.556   -4.492   1.827   1.496   0.833  H61  BMX  32  
BMX  H62  H62C  H  0  1  N  N  N  31.105   8.185   -4.896   1.269  -0.116   1.339  H62  BMX  33  
BMX  H18  H18   H  0  1  N  N  N  33.926   6.685   -3.332   3.446  -2.391   0.984  H18  BMX  34  
BMX  H19  H19   H  0  1  N  N  N  35.987   7.799   -5.918   5.706  -1.211  -0.876  H19  BMX  35  
#   #
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
BMX  C1   O1   SING  N  N   1  
BMX  C1   C2   SING  N  N   2  
BMX  C1   O5   SING  N  N   3  
BMX  C2   N2   SING  N  N   4  
BMX  C2   C3   SING  N  N   5  
BMX  N2   C7   SING  N  N   6  
BMX  C7   O7   DOUB  N  N   7  
BMX  C7   C8   SING  N  N   8  
BMX  C3   O3   SING  N  N   9  
BMX  C3   C4   SING  N  N  10  
BMX  C4   O4   SING  N  N  11  
BMX  C4   C5   SING  N  N  12  
BMX  C5   C6   SING  N  N  13  
BMX  C5   O5   SING  N  N  14  
BMX  C6   O6   SING  N  N  15  
BMX  O6   P    SING  N  N  16  
BMX  P    O17  DOUB  N  N  17  
BMX  P    O18  SING  N  N  18  
BMX  P    O19  SING  N  N  19  
BMX  C1   H1   SING  N  N  20  
BMX  O1   HO1  SING  N  N  21  
BMX  C2   H2   SING  N  N  22  
BMX  N2   HN2  SING  N  N  23  
BMX  C3   H3   SING  N  N  24  
BMX  C8   H81  SING  N  N  25  
BMX  C8   H82  SING  N  N  26  
BMX  C8   H83  SING  N  N  27  
BMX  O3   HO3  SING  N  N  28  
BMX  C4   H4   SING  N  N  29  
BMX  O4   HO4  SING  N  N  30  
BMX  C5   H5   SING  N  N  31  
BMX  C6   H61  SING  N  N  32  
BMX  C6   H62  SING  N  N  33  
BMX  O18  H18  SING  N  N  34  
BMX  O19  H19  SING  N  N  35  
#   #
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
BMX  SMILES            ACDLabs               12.01  "O=P(O)(O)OCC1OC(O)C(NC(=O)C)C(O)C1O"  
BMX  SMILES_CANONICAL  CACTVS                3.370  "CC(=O)N[C@@H]1[C@@H](O)O[C@H](CO[P](O)(O)=O)[C@@H](O)[C@@H]1O"  
BMX  SMILES            CACTVS                3.370  "CC(=O)N[CH]1[CH](O)O[CH](CO[P](O)(O)=O)[CH](O)[CH]1O"  
BMX  SMILES_CANONICAL  "OpenEye OEToolkits"  1.7.2  "CC(=O)N[C@H]1[C@H]([C@@H]([C@H](O[C@@H]1O)COP(=O)(O)O)O)O"  
BMX  SMILES            "OpenEye OEToolkits"  1.7.2  "CC(=O)NC1C(C(C(OC1O)COP(=O)(O)O)O)O"  
BMX  InChI             InChI                 1.03   "InChI=1S/C8H16NO9P/c1-3(10)9-5-7(12)6(11)4(18-8(5)13)2-17-19(14,15)16/h4-8,11-13H,2H2,1H3,(H,9,10)(H2,14,15,16)/t4-,5+,6-,7-,8+/m1/s1"  
BMX  InChIKey          InChI                 1.03   BRGMHAYQAZFZDJ-UOLFYFMNSA-N  
#   #
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
BMX  "SYSTEMATIC NAME"            ACDLabs               12.01  "2-(acetylamino)-2-deoxy-6-O-phosphono-alpha-D-mannopyranose"  
BMX  "SYSTEMATIC NAME"            "OpenEye OEToolkits"  1.7.2  "[(2R,3S,4R,5S,6S)-5-acetamido-3,4,6-tris(oxidanyl)oxan-2-yl]methyl dihydrogen phosphate"  
BMX  "IUPAC CARBOHYDRATE SYMBOL"  PDB-CARE              1.0    a-D-ManpNAc6PO3  
#
_pdbx_chem_comp_related.comp_id            BMX
_pdbx_chem_comp_related.related_comp_id    BM3
_pdbx_chem_comp_related.relationship_type  "Carbohydrate core"
_pdbx_chem_comp_related.details            ?
#   #
loop_
_pdbx_chem_comp_atom_related.ordinal
_pdbx_chem_comp_atom_related.comp_id
_pdbx_chem_comp_atom_related.atom_id
_pdbx_chem_comp_atom_related.related_comp_id
_pdbx_chem_comp_atom_related.related_atom_id
_pdbx_chem_comp_atom_related.related_type
 1  BMX  C1   BM3  C1   "Carbohydrate core"  
 2  BMX  C2   BM3  C2   "Carbohydrate core"  
 3  BMX  C3   BM3  C3   "Carbohydrate core"  
 4  BMX  C4   BM3  C4   "Carbohydrate core"  
 5  BMX  C5   BM3  C5   "Carbohydrate core"  
 6  BMX  C6   BM3  C6   "Carbohydrate core"  
 7  BMX  C7   BM3  C7   "Carbohydrate core"  
 8  BMX  C8   BM3  C8   "Carbohydrate core"  
 9  BMX  N2   BM3  N2   "Carbohydrate core"  
10  BMX  O1   BM3  O1   "Carbohydrate core"  
11  BMX  O3   BM3  O3   "Carbohydrate core"  
12  BMX  O4   BM3  O4   "Carbohydrate core"  
13  BMX  O5   BM3  O5   "Carbohydrate core"  
14  BMX  O6   BM3  O6   "Carbohydrate core"  
15  BMX  O7   BM3  O7   "Carbohydrate core"  
16  BMX  H1   BM3  H1   "Carbohydrate core"  
17  BMX  H2   BM3  H2   "Carbohydrate core"  
18  BMX  H3   BM3  H3   "Carbohydrate core"  
19  BMX  H4   BM3  H4   "Carbohydrate core"  
20  BMX  H5   BM3  H5   "Carbohydrate core"  
21  BMX  H61  BM3  H61  "Carbohydrate core"  
22  BMX  H62  BM3  H62  "Carbohydrate core"  
23  BMX  H81  BM3  H81  "Carbohydrate core"  
24  BMX  H82  BM3  H82  "Carbohydrate core"  
25  BMX  H83  BM3  H83  "Carbohydrate core"  
26  BMX  HO1  BM3  HO1  "Carbohydrate core"  
27  BMX  HN2  BM3  HN2  "Carbohydrate core"  
28  BMX  HO3  BM3  HO3  "Carbohydrate core"  
29  BMX  HO4  BM3  HO4  "Carbohydrate core"  
#   #
loop_
_pdbx_chem_comp_feature.comp_id
_pdbx_chem_comp_feature.type
_pdbx_chem_comp_feature.value
_pdbx_chem_comp_feature.source
_pdbx_chem_comp_feature.support
BMX  "CARBOHYDRATE ISOMER"                  D         PDB  ?  
BMX  "CARBOHYDRATE RING"                    pyranose  PDB  ?  
BMX  "CARBOHYDRATE ANOMER"                  alpha     PDB  ?  
BMX  "CARBOHYDRATE PRIMARY CARBONYL GROUP"  aldose    PDB  ?  
#   #
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
BMX  "Create component"          2011-05-10  EBI   
BMX  "Modify descriptor"         2011-06-04  RCSB  
BMX  "Other modification"        2020-07-03  RCSB  
BMX  "Modify parent residue"     2020-07-17  RCSB  
BMX  "Modify name"               2020-07-17  RCSB  
BMX  "Modify synonyms"           2020-07-17  RCSB  
BMX  "Modify linking type"       2020-07-17  RCSB  
BMX  "Modify atom id"            2020-07-17  RCSB  
BMX  "Modify component atom id"  2020-07-17  RCSB  
BMX  "Modify leaving atom flag"  2020-07-17  RCSB  
##
