data_A1IFX
# 
_chem_comp.id                                    A1IFX 
_chem_comp.name                                  "[(4~{S},5~{S})-4-(aminomethyl)-5-azanyl-6-oxidanyl-6-oxidanylidene-hexyl]-$l^{3}-oxidanyl-bis(oxidanyl)boron" 
_chem_comp.type                                  non-polymer 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C7 H18 B N2 O5" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    -1 
_chem_comp.pdbx_initial_date                     2024-06-26 
_chem_comp.pdbx_modified_date                    2024-11-27 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        221.039 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     A1IFX 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        9FRV 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  PDBE 
_chem_comp.pdbx_pcm                              ? 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.pdbx_n_terminal_atom_flag 
_chem_comp_atom.pdbx_backbone_atom_flag 
_chem_comp_atom.pdbx_c_terminal_atom_flag 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
A1IFX C1  C1  C 0  1 N N N N N N 26.700 -10.916 -33.962 3.606  0.157  0.429  C1  A1IFX 1  
A1IFX C2  C2  C 0  1 N N S N N N 26.064 -10.135 -32.808 2.366  0.983  0.202  C2  A1IFX 2  
A1IFX C3  C3  C 0  1 N N S N N N 26.771 -10.313 -31.443 1.135  0.073  0.231  C3  A1IFX 3  
A1IFX O5  O1  O 0  1 N N N N N N 28.025 -10.846 -34.189 3.949  -0.211 1.674  O5  A1IFX 4  
A1IFX C8  C4  C 0  1 N N N N N N 27.917 -9.295  -31.336 1.255  -0.982 -0.871 C8  A1IFX 5  
A1IFX C10 C5  C 0  1 N N N N N N 27.190 -12.139 -29.660 -1.361 0.025  0.153  C10 A1IFX 6  
A1IFX C11 C6  C 0  1 N N N N N N 27.340 -13.661 -29.511 -2.621 0.863  -0.078 C11 A1IFX 7  
A1IFX C4  C7  C 0  1 N N N N N N 27.240 -11.757 -31.146 -0.124 0.911  0.000  C4  A1IFX 8  
A1IFX O6  O2  O 0  1 N N N N N N 26.035 -11.594 -34.716 4.289  -0.178 -0.510 O6  A1IFX 9  
A1IFX N7  N1  N 0  1 N N N N N N 24.629 -10.442 -32.669 2.452  1.647  -1.105 N7  A1IFX 10 
A1IFX N9  N2  N 0  1 N N N N N N 27.380 -7.949  -31.079 2.396  -1.862 -0.584 N9  A1IFX 11 
A1IFX B12 B1  B -1 1 N N N N N N 27.425 -14.180 -27.989 -3.912 -0.063 0.082  B12 A1IFX 12 
A1IFX O13 O3  O 0  1 N N N N N N 28.432 -13.574 -27.277 -3.864 -1.075 -0.836 O13 A1IFX 13 
A1IFX O14 O4  O 0  1 N N N N N N 26.233 -13.971 -27.348 -3.941 -0.592 1.342  O14 A1IFX 14 
A1IFX O15 O5  O 0  1 N N N N N N 27.673 -15.525 -28.009 -5.037 0.686  -0.124 O15 A1IFX 15 
A1IFX H1  H1  H 0  1 N N N N N N 26.147 -9.069  -33.066 2.280  1.734  0.987  H1  A1IFX 16 
A1IFX H2  H2  H 0  1 N N N N N N 26.036 -10.051 -30.667 1.071  -0.420 1.201  H2  A1IFX 17 
A1IFX H3  H3  H 0  1 N N N N N N 28.244 -11.370 -34.950 4.753  -0.739 1.769  H3  A1IFX 18 
A1IFX H4  H4  H 0  1 N N N N N N 28.584 -9.584  -30.510 0.340  -1.573 -0.908 H4  A1IFX 19 
A1IFX H5  H5  H 0  1 N N N N N N 28.484 -9.286  -32.279 1.408  -0.489 -1.831 H5  A1IFX 20 
A1IFX H6  H6  H 0  1 N N N N N N 28.010 -11.637 -29.126 -1.384 -0.397 1.158  H6  A1IFX 21 
A1IFX H7  H7  H 0  1 N N N N N N 26.227 -11.823 -29.234 -1.323 -0.782 -0.579 H7  A1IFX 22 
A1IFX H8  H8  H 0  1 N N N N N N 26.473 -14.140 -29.989 -2.659 1.669  0.654  H8  A1IFX 23 
A1IFX H9  H9  H 0  1 N N N N N N 28.260 -13.968 -30.030 -2.597 1.284  -1.082 H9  A1IFX 24 
A1IFX H10 H10 H 0  1 N N N N N N 26.594 -12.451 -31.703 -0.162 1.718  0.732  H10 A1IFX 25 
A1IFX H11 H11 H 0  1 N N N N N N 28.278 -11.862 -31.495 -0.101 1.333  -1.004 H11 A1IFX 26 
A1IFX H12 H12 H 0  1 N N N N N N 24.247 -9.916  -31.909 2.532  0.971  -1.850 H12 A1IFX 27 
A1IFX H13 H13 H 0  1 N N N N N N 24.153 -10.199 -33.514 1.663  2.257  -1.254 H13 A1IFX 28 
A1IFX H15 H15 H 0  1 N N N N N N 28.134 -7.296  -31.011 2.309  -2.281 0.329  H15 A1IFX 29 
A1IFX H16 H16 H 0  1 N N N N N N 26.775 -7.683  -31.829 2.496  -2.568 -1.298 H16 A1IFX 30 
A1IFX H18 H18 H 0  1 N N N N N N 28.441 -13.912 -26.389 -3.841 -0.772 -1.754 H18 A1IFX 31 
A1IFX H19 H19 H 0  1 N N N N N N 26.296 -14.281 -26.452 -3.976 0.071  2.046  H19 A1IFX 32 
A1IFX H20 H20 H 0  1 N N N N N N 27.727 -15.851 -27.118 -5.862 0.187  -0.043 H20 A1IFX 33 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
A1IFX O6  C1  DOUB N N 1  
A1IFX O5  C1  SING N N 2  
A1IFX C1  C2  SING N N 3  
A1IFX C2  N7  SING N N 4  
A1IFX C2  C3  SING N N 5  
A1IFX C3  C8  SING N N 6  
A1IFX C3  C4  SING N N 7  
A1IFX C8  N9  SING N N 8  
A1IFX C4  C10 SING N N 9  
A1IFX C10 C11 SING N N 10 
A1IFX C11 B12 SING N N 11 
A1IFX O15 B12 SING N N 12 
A1IFX B12 O14 SING N N 13 
A1IFX B12 O13 SING N N 14 
A1IFX C2  H1  SING N N 15 
A1IFX C3  H2  SING N N 16 
A1IFX O5  H3  SING N N 17 
A1IFX C8  H4  SING N N 18 
A1IFX C8  H5  SING N N 19 
A1IFX C10 H6  SING N N 20 
A1IFX C10 H7  SING N N 21 
A1IFX C11 H8  SING N N 22 
A1IFX C11 H9  SING N N 23 
A1IFX C4  H10 SING N N 24 
A1IFX C4  H11 SING N N 25 
A1IFX N7  H12 SING N N 26 
A1IFX N7  H13 SING N N 27 
A1IFX N9  H15 SING N N 28 
A1IFX N9  H16 SING N N 29 
A1IFX O13 H18 SING N N 30 
A1IFX O14 H19 SING N N 31 
A1IFX O15 H20 SING N N 32 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
A1IFX InChI            InChI                1.06  "InChI=1S/C7H18BN2O5/c9-4-5(6(10)7(11)12)2-1-3-8(13,14)15/h5-6,13-15H,1-4,9-10H2,(H,11,12)/t5-,6-/m0/s1" 
A1IFX InChIKey         InChI                1.06  YMMHYLNSFFXXCS-WDSKDSINSA-N                                                                              
A1IFX SMILES_CANONICAL CACTVS               3.385 "NC[C@H](CCC[B](O)(O)O)[C@H](N)C(O)=O"                                                                   
A1IFX SMILES           CACTVS               3.385 "NC[CH](CCC[B](O)(O)O)[CH](N)C(O)=O"                                                                     
A1IFX SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "B(CCC[C@@H](CN)[C@@H](C(=O)O)N)(O)(O)O"                                                                 
A1IFX SMILES           "OpenEye OEToolkits" 2.0.7 "B(CCCC(CN)C(C(=O)O)N)(O)(O)O"                                                                           
# 
_pdbx_chem_comp_identifier.comp_id           A1IFX 
_pdbx_chem_comp_identifier.type              "SYSTEMATIC NAME" 
_pdbx_chem_comp_identifier.program           "OpenEye OEToolkits" 
_pdbx_chem_comp_identifier.program_version   2.0.7 
_pdbx_chem_comp_identifier.identifier        "[(4~{S},5~{S})-4-(aminomethyl)-5-azanyl-6-oxidanyl-6-oxidanylidene-hexyl]-tris(oxidanyl)boron" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
A1IFX "Create component" 2024-06-26 PDBE 
A1IFX "Initial release"  2024-11-27 RCSB 
A1IFX "Modify charge"    2024-11-27 PDBE 
# 
