data_9RX
#

_chem_comp.id                                   9RX
_chem_comp.name                                 "2-[3-[2-(1H-benzimidazol-2-ylamino)-2-oxidanylidene-ethyl]sulfanyl-1H-1,2,4-triazol-5-yl]benzoic acid"
_chem_comp.type                                 NON-POLYMER
_chem_comp.pdbx_type                            HETAIN
_chem_comp.formula                              "C18 H14 N6 O3 S"
_chem_comp.mon_nstd_parent_comp_id              ?
_chem_comp.pdbx_synonyms                        ?
_chem_comp.pdbx_formal_charge                   0
_chem_comp.pdbx_initial_date                    2018-07-05
_chem_comp.pdbx_modified_date                   2020-09-04
_chem_comp.pdbx_ambiguous_flag                  N
_chem_comp.pdbx_release_status                  REL
_chem_comp.pdbx_replaced_by                     ?
_chem_comp.pdbx_replaces                        ?
_chem_comp.formula_weight                       394.407
_chem_comp.one_letter_code                      ?
_chem_comp.three_letter_code                    9RX
_chem_comp.pdbx_model_coordinates_details       ?
_chem_comp.pdbx_model_coordinates_missing_flag  N
_chem_comp.pdbx_ideal_coordinates_details       Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag  N
_chem_comp.pdbx_model_coordinates_db_code       6A61
_chem_comp.pdbx_subcomponent_list               ?
_chem_comp.pdbx_processing_site                 RCSB
#   #
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
9RX  C10   C1   C  0  1  Y  N  N  -36.071   9.024   5.880    1.828  -0.497   0.022  C10   9RX   1  
9RX  C15   C2   C  0  1  N  N  N  -36.925  11.271   7.514   -0.923  -1.012  -0.003  C15   9RX   2  
9RX  C17   C3   C  0  1  Y  N  N  -39.379  10.292  12.992   -6.353   0.680   0.032  C17   9RX   3  
9RX  C20   C4   C  0  1  Y  N  N  -38.523  10.663  11.043   -4.666  -0.753  -0.007  C20   9RX   4  
9RX  C22   C5   C  0  1  Y  N  N  -41.736  10.174  12.500   -8.222  -0.856  -0.035  C22   9RX   5  
9RX  C24   C6   C  0  1  Y  N  N  -40.973   9.883  14.768   -8.597   1.513   0.044  C24   9RX   6  
9RX  C26   C7   C  0  1  N  N  N  -34.482   4.851   4.681    4.992   1.868  -0.163  C26   9RX   7  
9RX  C01   C8   C  0  1  Y  N  N  -33.872   3.489   8.163    8.167  -0.124   0.054  C01   9RX   8  
9RX  C02   C9   C  0  1  Y  N  N  -33.991   3.569   6.788    7.301   0.946  -0.045  C02   9RX   9  
9RX  C03   C10  C  0  1  Y  N  N  -34.358   4.765   6.194    5.923   0.728  -0.058  C03   9RX  10  
9RX  C04   C11  C  0  1  Y  N  N  -34.595   5.882   6.977    5.427  -0.587   0.030  C04   9RX  11  
9RX  C05   C12  C  0  1  Y  N  N  -34.483   5.800   8.356    6.318  -1.653   0.128  C05   9RX  12  
9RX  C06   C13  C  0  1  Y  N  N  -34.118   4.602   8.950    7.679  -1.417   0.140  C06   9RX  13  
9RX  C07   C14  C  0  1  Y  N  N  -35.001   7.201   6.322    3.970  -0.835   0.018  C07   9RX  14  
9RX  C14   C15  C  0  1  N  N  N  -37.967  10.983   8.595   -2.320  -0.446   0.010  C14   9RX  15  
9RX  C18   C16  C  0  1  Y  N  N  -40.408  10.351  12.076   -6.843  -0.636  -0.017  C18   9RX  16  
9RX  C23   C17  C  0  1  Y  N  N  -42.012   9.941  13.843   -9.086   0.216  -0.004  C23   9RX  17  
9RX  C25   C18  C  0  1  Y  N  N  -39.659  10.059  14.350   -7.237   1.747   0.062  C25   9RX  18  
9RX  N08   N1   N  0  1  Y  N  N  -34.413   7.808   5.313    3.369  -2.045  -0.025  N08   9RX  19  
9RX  N09   N2   N  0  1  Y  N  N  -35.068   8.937   5.037    1.986  -1.801  -0.024  N09   9RX  20  
9RX  N11   N3   N  0  1  Y  N  N  -36.042   7.954   6.697    3.026   0.086   0.043  N11   9RX  21  
9RX  N13   N4   N  0  1  N  N  N  -37.553  10.919   9.988   -3.383  -1.273  -0.019  N13   9RX  22  
9RX  N19   N5   N  0  1  Y  N  N  -38.230  10.491  12.322   -4.972   0.576   0.033  N19   9RX  23  
9RX  N21   N6   N  0  1  Y  N  N  -39.835  10.583  10.881   -5.765  -1.463  -0.038  N21   9RX  24  
9RX  O16   O1   O  0  1  N  N  N  -39.104  10.815   8.300   -2.487   0.755   0.047  O16   9RX  25  
9RX  O27   O2   O  0  1  N  N  N  -35.375   4.203   4.074    5.041   2.863   0.744  O27   9RX  26  
9RX  O28   O3   O  0  1  N  N  N  -33.683   5.578   4.036    4.181   1.909  -1.066  O28   9RX  27  
9RX  S12   S1   S  0  1  N  N  N  -37.299  10.352   5.985    0.280   0.345   0.043  S12   9RX  28  
9RX  H151  H1   H  0  0  N  N  N  -35.933  10.970   7.881   -0.783  -1.652   0.868  H151  9RX  29  
9RX  H152  H2   H  0  0  N  N  N  -36.923  12.349   7.294   -0.777  -1.597  -0.911  H152  9RX  30  
9RX  H221  H3   H  0  0  N  N  N  -42.542  10.219  11.783   -8.610  -1.863  -0.072  H221  9RX  31  
9RX  H241  H4   H  0  0  N  N  N  -41.188   9.701  15.811   -9.285   2.345   0.067  H241  9RX  32  
9RX  H011  H5   H  0  0  N  N  N  -33.586   2.556   8.625    9.233   0.048   0.059  H011  9RX  33  
9RX  H021  H6   H  0  0  N  N  N  -33.798   2.699   6.177    7.689   1.952  -0.111  H021  9RX  34  
9RX  H051  H7   H  0  0  N  N  N  -34.680   6.669   8.967    5.945  -2.664   0.197  H051  9RX  35  
9RX  H061  H8   H  0  0  N  N  N  -34.026   4.537  10.024    8.366  -2.246   0.212  H061  9RX  36  
9RX  H231  H9   H  0  0  N  N  N  -43.033   9.805  14.169  -10.152   0.046  -0.019  H231  9RX  37  
9RX  H251  H10  H  0  0  N  N  N  -38.853  10.017  15.068   -6.863   2.760   0.099  H251  9RX  38  
9RX  H1    H11  H  0  1  N  N  N  -33.603   7.475   4.830    3.806  -2.911  -0.052  H1    9RX  39  
9RX  H131  H12  H  0  0  N  N  N  -36.590  11.052  10.224   -3.249  -2.234  -0.049  H131  9RX  40  
9RX  H2    H13  H  0  1  N  N  N  -37.313  10.506  12.721   -4.340   1.312   0.061  H2    9RX  41  
9RX  H4    H15  H  0  1  N  N  N  -35.310   4.371   3.141    4.411   3.589   0.634  H4    9RX  42  
#   #
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
9RX  O28  C26   DOUB  N  N   1  
9RX  O27  C26   SING  N  N   2  
9RX  C26  C03   SING  N  N   3  
9RX  N09  N08   SING  Y  N   4  
9RX  N09  C10   DOUB  Y  N   5  
9RX  N08  C07   SING  Y  N   6  
9RX  C10  S12   SING  N  N   7  
9RX  C10  N11   SING  Y  N   8  
9RX  S12  C15   SING  N  N   9  
9RX  C03  C02   DOUB  Y  N  10  
9RX  C03  C04   SING  Y  N  11  
9RX  C07  N11   DOUB  Y  N  12  
9RX  C07  C04   SING  N  N  13  
9RX  C02  C01   SING  Y  N  14  
9RX  C04  C05   DOUB  Y  N  15  
9RX  C15  C14   SING  N  N  16  
9RX  C01  C06   DOUB  Y  N  17  
9RX  O16  C14   DOUB  N  N  18  
9RX  C05  C06   SING  Y  N  19  
9RX  C14  N13   SING  N  N  20  
9RX  N13  C20   SING  N  N  21  
9RX  N21  C20   DOUB  Y  N  22  
9RX  N21  C18   SING  Y  N  23  
9RX  C20  N19   SING  Y  N  24  
9RX  C18  C22   DOUB  Y  N  25  
9RX  C18  C17   SING  Y  N  26  
9RX  N19  C17   SING  Y  N  27  
9RX  C22  C23   SING  Y  N  28  
9RX  C17  C25   DOUB  Y  N  29  
9RX  C23  C24   DOUB  Y  N  30  
9RX  C25  C24   SING  Y  N  31  
9RX  C15  H151  SING  N  N  32  
9RX  C15  H152  SING  N  N  33  
9RX  C22  H221  SING  N  N  34  
9RX  C24  H241  SING  N  N  35  
9RX  C01  H011  SING  N  N  36  
9RX  C02  H021  SING  N  N  37  
9RX  C05  H051  SING  N  N  38  
9RX  C06  H061  SING  N  N  39  
9RX  C23  H231  SING  N  N  40  
9RX  C25  H251  SING  N  N  41  
9RX  N08  H1    SING  N  N  42  
9RX  N13  H131  SING  N  N  43  
9RX  N19  H2    SING  N  N  44  
9RX  O27  H4    SING  N  N  45  
#   #
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
9RX  InChI             InChI                 1.03   "InChI=1S/C18H14N6O3S/c25-14(21-17-19-12-7-3-4-8-13(12)20-17)9-28-18-22-15(23-24-18)10-5-1-2-6-11(10)16(26)27/h1-8H,9H2,(H,26,27)(H,22,23,24)(H2,19,20,21,25)"  
9RX  InChIKey          InChI                 1.03   MWUOXWJZZXSQFY-UHFFFAOYSA-N  
9RX  SMILES_CANONICAL  CACTVS                3.385  "OC(=O)c1ccccc1c2[nH]nc(SCC(=O)Nc3[nH]c4ccccc4n3)n2"  
9RX  SMILES            CACTVS                3.385  "OC(=O)c1ccccc1c2[nH]nc(SCC(=O)Nc3[nH]c4ccccc4n3)n2"  
9RX  SMILES_CANONICAL  "OpenEye OEToolkits"  2.0.6  "c1ccc(c(c1)c2[nH]nc(n2)SCC(=O)Nc3[nH]c4ccccc4n3)C(=O)O"  
9RX  SMILES            "OpenEye OEToolkits"  2.0.6  "c1ccc(c(c1)c2[nH]nc(n2)SCC(=O)Nc3[nH]c4ccccc4n3)C(=O)O"  
#
_pdbx_chem_comp_identifier.comp_id          9RX
_pdbx_chem_comp_identifier.type             "SYSTEMATIC NAME"
_pdbx_chem_comp_identifier.program          "OpenEye OEToolkits"
_pdbx_chem_comp_identifier.program_version  2.0.6
_pdbx_chem_comp_identifier.identifier       "2-[3-[2-(1~{H}-benzimidazol-2-ylamino)-2-oxidanylidene-ethyl]sulfanyl-1~{H}-1,2,4-triazol-5-yl]benzoic acid"
#   #
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
9RX  "Create component"  2018-07-05  PDBJ  
9RX  "Initial release"   2020-09-09  RCSB  
##
