data_8LX
#

_chem_comp.id                                   8LX
_chem_comp.name                                 "(5S)-5-[[4-[2-[[6-(4-methoxyphenoxy)pyrimidin-4-yl]-methyl-amino]ethoxy]phenyl]methyl]-1,3-thiazolidine-2,4-dione"
_chem_comp.type                                 NON-POLYMER
_chem_comp.pdbx_type                            HETAIN
_chem_comp.formula                              "C24 H24 N4 O5 S"
_chem_comp.mon_nstd_parent_comp_id              ?
_chem_comp.pdbx_synonyms                        Lobeglitazone
_chem_comp.pdbx_formal_charge                   0
_chem_comp.pdbx_initial_date                    2017-08-03
_chem_comp.pdbx_modified_date                   2021-03-01
_chem_comp.pdbx_ambiguous_flag                  N
_chem_comp.pdbx_release_status                  REL
_chem_comp.pdbx_replaced_by                     ?
_chem_comp.pdbx_replaces                        ?
_chem_comp.formula_weight                       480.536
_chem_comp.one_letter_code                      ?
_chem_comp.three_letter_code                    8LX
_chem_comp.pdbx_model_coordinates_details       ?
_chem_comp.pdbx_model_coordinates_missing_flag  N
_chem_comp.pdbx_ideal_coordinates_details       Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag  N
_chem_comp.pdbx_model_coordinates_db_code       5Y2T
_chem_comp.pdbx_subcomponent_list               ?
_chem_comp.pdbx_processing_site                 PDBJ
#   #
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
8LX  CAE  C1   C  0  1  N  N  S   9.764   1.622  53.275   6.158  -0.434   0.187  CAE  8LX   1  
8LX  CAF  C2   C  0  1  N  N  N  10.451   0.269  53.606   5.171  -0.248   1.341  CAF  8LX   2  
8LX  CAG  C3   C  0  1  Y  N  N  10.418  -0.666  52.545   3.937   0.457   0.838  CAG  8LX   3  
8LX  CAH  C4   C  0  1  N  N  N   9.684   2.431  54.440   7.457  -1.029   0.684  CAH  8LX   4  
8LX  CAI  C5   C  0  1  Y  N  N  11.566  -0.871  51.791   2.872  -0.278   0.351  CAI  8LX   5  
8LX  CAJ  C6   C  0  1  Y  N  N   9.266  -1.395  52.250   3.870   1.838   0.870  CAJ  8LX   6  
8LX  CAK  C7   C  0  1  N  N  N   9.382  -4.409  47.541  -0.765   4.347  -1.029  CAK  8LX   7  
8LX  CAL  C8   C  0  1  Y  N  N  10.426  -2.487  50.435   1.673   1.751  -0.084  CAL  8LX   8  
8LX  CAM  C9   C  0  1  N  N  N   9.208  -3.708  48.904   0.561   3.814  -0.480  CAM  8LX   9  
8LX  CAN  C10  C  0  1  Y  N  N  11.570  -1.785  50.753   1.740   0.366  -0.110  CAN  8LX  10  
8LX  CAO  C11  C  0  1  Y  N  N   9.269  -2.311  51.197   2.740   2.486   0.411  CAO  8LX  11  
8LX  CAP  C12  C  0  1  N  N  N  10.984   3.866  53.282   6.929  -2.782  -0.734  CAP  8LX  12  
8LX  CAR  C13  C  0  1  N  N  N  11.170  -3.196  46.154  -2.269   4.770   0.970  CAR  8LX  13  
8LX  CAV  C14  C  0  1  Y  N  N   7.394  -0.347  42.047  -5.814  -0.497   0.578  CAV  8LX  14  
8LX  CAW  C15  C  0  1  Y  N  N   6.812   0.904  41.853  -5.097  -1.612   0.988  CAW  8LX  15  
8LX  CAX  C16  C  0  1  Y  N  N   7.015  -1.420  41.249  -7.035  -0.655  -0.061  CAX  8LX  16  
8LX  CAY  C17  C  0  1  Y  N  N   5.421  -0.002  40.118  -6.816  -3.036   0.114  CAY  8LX  17  
8LX  CAZ  C18  C  0  1  Y  N  N   5.820   1.081  40.898  -5.597  -2.878   0.757  CAZ  8LX  18  
8LX  NAA  N1   N  0  1  N  N  N   9.756  -3.427  46.494  -1.861   3.924  -0.154  NAA  8LX  19  
8LX  NAB  N2   N  0  1  N  N  N  10.353   3.601  54.436   7.742  -2.207   0.155  NAB  8LX  20  
8LX  CBA  C19  C  0  1  Y  N  N   6.022  -1.248  40.289  -7.535  -1.921  -0.292  CBA  8LX  21  
8LX  CBB  C20  C  0  1  N  N  N   4.133  -1.061  38.509  -6.514  -5.385   0.330  CBB  8LX  22  
8LX  OBC  O1   O  0  1  N  N  N  10.487  -3.370  49.399   0.560   2.386  -0.537  OBC  8LX  23  
8LX  OBD  O2   O  0  1  N  N  N   9.085   2.076  55.459   8.171  -0.477   1.494  OBD  8LX  24  
8LX  OBE  O3   O  0  1  N  N  N  11.644   4.882  53.074   7.102  -3.856  -1.275  OBE  8LX  25  
8LX  OBF  O4   O  0  1  N  N  N   8.398  -0.509  42.963  -5.322   0.750   0.806  OBF  8LX  26  
8LX  OBG  O5   O  0  1  N  N  N   4.447   0.172  39.174  -7.308  -4.283  -0.115  OBG  8LX  27  
8LX  SBH  S1   S  0  1  N  N  N  10.731   2.648  52.146   5.551  -1.695  -0.984  SBH  8LX  28  
8LX  N1   N3   N  0  1  Y  N  N   7.558  -2.822  46.253  -2.087   1.900  -1.346  N1   8LX  29  
8LX  C2   C21  C  0  1  Y  N  N   6.529  -2.140  45.606  -2.701   0.757  -1.576  C2   8LX  30  
8LX  N3   N4   N  0  1  Y  N  N   6.843  -1.351  44.486  -3.753   0.380  -0.878  N3   8LX  31  
8LX  C4   C22  C  0  1  Y  N  N   8.107  -1.280  44.054  -4.239   1.147   0.094  C4   8LX  32  
8LX  C5   C23  C  0  1  Y  N  N   9.134  -1.953  44.706  -3.621   2.360   0.370  C5   8LX  33  
8LX  C6   C24  C  0  1  Y  N  N   8.824  -2.740  45.830  -2.512   2.724  -0.390  C6   8LX  34  
8LX  H1   H1   H  0  1  N  N  N   8.781   1.453  52.811   6.337   0.513  -0.322  H1   8LX  35  
8LX  H2   H2   H  0  1  N  N  N   9.942  -0.175  54.474   4.894  -1.222   1.743  H2   8LX  36  
8LX  H3   H3   H  0  1  N  N  N  11.503   0.468  53.860   5.637   0.350   2.125  H3   8LX  37  
8LX  H4   H4   H  0  1  N  N  N  12.462  -0.313  52.017   2.926  -1.357   0.331  H4   8LX  38  
8LX  H5   H5   H  0  1  N  N  N   8.371  -1.251  52.837   4.701   2.409   1.255  H5   8LX  39  
8LX  H6   H6   H  0  1  N  N  N   8.435  -4.894  47.260  -0.730   5.436  -1.069  H6   8LX  40  
8LX  H7   H7   H  0  1  N  N  N  10.173  -5.169  47.623  -0.927   3.952  -2.032  H7   8LX  41  
8LX  H8   H8   H  0  1  N  N  N   8.606  -2.796  48.778   1.384   4.202  -1.080  H8   8LX  42  
8LX  H9   H9   H  0  1  N  N  N   8.704  -4.386  49.609   0.681   4.137   0.554  H9   8LX  43  
8LX  H10  H10  H  0  1  N  N  N  12.475  -1.950  50.187   0.911  -0.209  -0.495  H10  8LX  44  
8LX  H11  H11  H  0  1  N  N  N   8.380  -2.882  50.972   2.690   3.565   0.433  H11  8LX  45  
8LX  H12  H12  H  0  1  N  N  N  11.808  -3.833  46.785  -3.042   5.464   0.641  H12  8LX  46  
8LX  H13  H13  H  0  1  N  N  N  11.338  -3.443  45.095  -2.660   4.145   1.773  H13  8LX  47  
8LX  H14  H14  H  0  1  N  N  N  11.421  -2.139  46.328  -1.408   5.331   1.333  H14  8LX  48  
8LX  H15  H15  H  0  1  N  N  N   7.135   1.743  42.451  -4.148  -1.489   1.489  H15  8LX  49  
8LX  H16  H16  H  0  1  N  N  N   7.489  -2.383  41.373  -7.596   0.213  -0.377  H16  8LX  50  
8LX  H17  H17  H  0  1  N  N  N   5.362   2.049  40.761  -5.037  -3.746   1.073  H17  8LX  51  
8LX  H18  H18  H  0  1  N  N  N  10.377   4.217  55.223   8.557  -2.662   0.417  H18  8LX  52  
8LX  H19  H19  H  0  1  N  N  N   5.716  -2.082  39.675  -8.484  -2.044  -0.793  H19  8LX  53  
8LX  H20  H20  H  0  1  N  N  N   3.348  -0.884  37.759  -7.020  -6.319   0.087  H20  8LX  54  
8LX  H21  H21  H  0  1  N  N  N   5.034  -1.449  38.012  -5.544  -5.357  -0.166  H21  8LX  55  
8LX  H22  H22  H  0  1  N  N  N   3.776  -1.795  39.247  -6.373  -5.319   1.409  H22  8LX  56  
8LX  H23  H23  H  0  1  N  N  N   5.511  -2.216  45.958  -2.331   0.112  -2.358  H23  8LX  57  
8LX  H24  H24  H  0  1  N  N  N  10.152  -1.873  44.356  -3.992   3.006   1.153  H24  8LX  58  
#   #
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
8LX  CBB  OBG  SING  N  N   1  
8LX  OBG  CAY  SING  N  N   2  
8LX  CAY  CBA  DOUB  Y  N   3  
8LX  CAY  CAZ  SING  Y  N   4  
8LX  CBA  CAX  SING  Y  N   5  
8LX  CAZ  CAW  DOUB  Y  N   6  
8LX  CAX  CAV  DOUB  Y  N   7  
8LX  CAW  CAV  SING  Y  N   8  
8LX  CAV  OBF  SING  N  N   9  
8LX  OBF  C4   SING  N  N  10  
8LX  C4   N3   DOUB  Y  N  11  
8LX  C4   C5   SING  Y  N  12  
8LX  N3   C2   SING  Y  N  13  
8LX  C5   C6   DOUB  Y  N  14  
8LX  C2   N1   DOUB  Y  N  15  
8LX  C6   N1   SING  Y  N  16  
8LX  C6   NAA  SING  N  N  17  
8LX  CAR  NAA  SING  N  N  18  
8LX  NAA  CAK  SING  N  N  19  
8LX  CAK  CAM  SING  N  N  20  
8LX  CAM  OBC  SING  N  N  21  
8LX  OBC  CAL  SING  N  N  22  
8LX  CAL  CAN  DOUB  Y  N  23  
8LX  CAL  CAO  SING  Y  N  24  
8LX  CAN  CAI  SING  Y  N  25  
8LX  CAO  CAJ  DOUB  Y  N  26  
8LX  CAI  CAG  DOUB  Y  N  27  
8LX  SBH  CAE  SING  N  N  28  
8LX  SBH  CAP  SING  N  N  29  
8LX  CAJ  CAG  SING  Y  N  30  
8LX  CAG  CAF  SING  N  N  31  
8LX  OBE  CAP  DOUB  N  N  32  
8LX  CAE  CAF  SING  N  N  33  
8LX  CAE  CAH  SING  N  N  34  
8LX  CAP  NAB  SING  N  N  35  
8LX  NAB  CAH  SING  N  N  36  
8LX  CAH  OBD  DOUB  N  N  37  
8LX  CAE  H1   SING  N  N  38  
8LX  CAF  H2   SING  N  N  39  
8LX  CAF  H3   SING  N  N  40  
8LX  CAI  H4   SING  N  N  41  
8LX  CAJ  H5   SING  N  N  42  
8LX  CAK  H6   SING  N  N  43  
8LX  CAK  H7   SING  N  N  44  
8LX  CAM  H8   SING  N  N  45  
8LX  CAM  H9   SING  N  N  46  
8LX  CAN  H10  SING  N  N  47  
8LX  CAO  H11  SING  N  N  48  
8LX  CAR  H12  SING  N  N  49  
8LX  CAR  H13  SING  N  N  50  
8LX  CAR  H14  SING  N  N  51  
8LX  CAW  H15  SING  N  N  52  
8LX  CAX  H16  SING  N  N  53  
8LX  CAZ  H17  SING  N  N  54  
8LX  NAB  H18  SING  N  N  55  
8LX  CBA  H19  SING  N  N  56  
8LX  CBB  H20  SING  N  N  57  
8LX  CBB  H21  SING  N  N  58  
8LX  CBB  H22  SING  N  N  59  
8LX  C2   H23  SING  N  N  60  
8LX  C5   H24  SING  N  N  61  
#   #
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
8LX  InChI             InChI                 1.03   "InChI=1S/C24H24N4O5S/c1-28(21-14-22(26-15-25-21)33-19-9-7-17(31-2)8-10-19)11-12-32-18-5-3-16(4-6-18)13-20-23(29)27-24(30)34-20/h3-10,14-15,20H,11-13H2,1-2H3,(H,27,29,30)/t20-/m0/s1"  
8LX  InChIKey          InChI                 1.03   CHHXEZSCHQVSRE-FQEVSTJZSA-N  
8LX  SMILES_CANONICAL  CACTVS                3.385  "COc1ccc(Oc2cc(ncn2)N(C)CCOc3ccc(C[C@@H]4SC(=O)NC4=O)cc3)cc1"  
8LX  SMILES            CACTVS                3.385  "COc1ccc(Oc2cc(ncn2)N(C)CCOc3ccc(C[CH]4SC(=O)NC4=O)cc3)cc1"  
8LX  SMILES_CANONICAL  "OpenEye OEToolkits"  2.0.6  "CN(CCOc1ccc(cc1)C[C@H]2C(=O)NC(=O)S2)c3cc(ncn3)Oc4ccc(cc4)OC"  
8LX  SMILES            "OpenEye OEToolkits"  2.0.6  "CN(CCOc1ccc(cc1)CC2C(=O)NC(=O)S2)c3cc(ncn3)Oc4ccc(cc4)OC"  
#
_pdbx_chem_comp_identifier.comp_id          8LX
_pdbx_chem_comp_identifier.type             "SYSTEMATIC NAME"
_pdbx_chem_comp_identifier.program          "OpenEye OEToolkits"
_pdbx_chem_comp_identifier.program_version  2.0.6
_pdbx_chem_comp_identifier.identifier       "(5~{S})-5-[[4-[2-[[6-(4-methoxyphenoxy)pyrimidin-4-yl]-methyl-amino]ethoxy]phenyl]methyl]-1,3-thiazolidine-2,4-dione"
#   #
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
8LX  "Create component"  2017-08-03  PDBJ  
8LX  "Initial release"   2017-12-20  RCSB  
8LX  "Modify synonyms"   2021-03-01  PDBE  
#
_pdbx_chem_comp_synonyms.ordinal     1
_pdbx_chem_comp_synonyms.comp_id     8LX
_pdbx_chem_comp_synonyms.name        Lobeglitazone
_pdbx_chem_comp_synonyms.provenance  ?
_pdbx_chem_comp_synonyms.type        ?
##
