data_6MX
# 
_chem_comp.id                                    6MX 
_chem_comp.name                                  "2-[(3~{R})-1-[6-cyclohexylsulfanyl-5-[[(1~{R},3~{S})-5-oxidanyl-2-adamantyl]carbamoyl]pyridin-2-yl]pyrrolidin-3-yl]ethanoic acid" 
_chem_comp.type                                  NON-POLYMER 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C28 H39 N3 O4 S" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2016-05-30 
_chem_comp.pdbx_modified_date                    2016-12-09 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        513.692 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     6MX 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        5L58 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  EBI 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
6MX O2  O1  O 0 1 N N N 15.155 25.639 181.487 -2.207 -1.453 0.223  O2  6MX 1  
6MX C17 C1  C 0 1 N N N 15.173 24.423 181.592 -2.070 -0.244 0.220  C17 6MX 2  
6MX N2  N1  N 0 1 N N N 16.227 23.714 181.198 -3.144 0.556  0.371  N2  6MX 3  
6MX C18 C2  C 0 1 N N R 17.459 24.383 180.828 -4.476 -0.030 0.540  C18 6MX 4  
6MX C23 C3  C 0 1 N N S 18.485 24.261 181.946 -5.376 0.956  1.286  C23 6MX 5  
6MX C22 C4  C 0 1 N N N 18.844 22.796 182.172 -5.488 2.253  0.482  C22 6MX 6  
6MX C24 C5  C 0 1 N N N 19.748 25.028 181.573 -6.767 0.345  1.462  C24 6MX 7  
6MX C25 C6  C 0 1 N N N 20.330 24.445 180.288 -7.370 0.043  0.089  C25 6MX 8  
6MX O3  O2  O 0 1 N N N 21.507 25.172 179.923 -8.669 -0.529 0.253  O3  6MX 9  
6MX C26 C7  C 0 1 N N N 20.683 22.980 180.514 -7.481 1.339  -0.716 C26 6MX 10 
6MX C21 C8  C 0 1 N N N 19.427 22.201 180.894 -6.090 1.952  -0.892 C21 6MX 11 
6MX C20 C9  C 0 1 N N N 18.401 22.325 179.770 -5.190 0.965  -1.638 C20 6MX 12 
6MX C27 C10 C 0 1 N N N 19.306 24.550 179.160 -6.469 -0.944 -0.657 C27 6MX 13 
6MX C19 C11 C 0 1 N N R 18.042 23.791 179.552 -5.078 -0.332 -0.834 C19 6MX 14 
6MX C9  C12 C 0 1 Y N N 13.978 23.735 182.185 -0.732 0.344  0.056  C9  6MX 15 
6MX C8  C13 C 0 1 Y N N 12.824 24.472 182.421 -0.561 1.736  0.051  C8  6MX 16 
6MX C7  C14 C 0 1 Y N N 11.714 23.847 182.974 0.702  2.240  -0.104 C7  6MX 17 
6MX C10 C15 C 0 1 Y N N 14.004 22.388 182.511 0.398  -0.481 -0.091 C10 6MX 18 
6MX S   S1  S 0 1 N N N 15.379 21.433 182.252 0.213  -2.233 -0.082 S   6MX 19 
6MX C11 C16 C 0 1 N N N 14.866 19.743 182.321 1.939  -2.733 -0.301 C11 6MX 20 
6MX C16 C17 C 0 1 N N N 14.850 19.268 183.771 2.014  -4.254 -0.449 C16 6MX 21 
6MX C15 C18 C 0 1 N N N 14.371 17.824 183.854 3.473  -4.677 -0.634 C15 6MX 22 
6MX C14 C19 C 0 1 N N N 15.258 16.912 183.015 4.288  -4.242 0.585  C14 6MX 23 
6MX C13 C20 C 0 1 N N N 15.343 17.409 181.575 4.213  -2.721 0.733  C13 6MX 24 
6MX C12 C21 C 0 1 N N N 15.818 18.857 181.528 2.754  -2.298 0.918  C12 6MX 25 
6MX N1  N2  N 0 1 Y N N 12.915 21.800 183.048 1.601  0.054  -0.238 N1  6MX 26 
6MX C6  C22 C 0 1 Y N N 11.783 22.493 183.281 1.779  1.367  -0.251 C6  6MX 27 
6MX N   N3  N 0 1 N N N 10.688 21.828 183.841 3.055  1.880  -0.407 N   6MX 28 
6MX C4  C23 C 0 1 N N N 10.795 20.433 184.235 3.467  2.656  0.790  C4  6MX 29 
6MX C3  C24 C 0 1 N N N 9.583  20.283 185.145 5.012  2.686  0.679  C3  6MX 30 
6MX C5  C25 C 0 1 N N N 9.414  22.492 184.059 4.050  0.794  -0.546 C5  6MX 31 
6MX C2  C26 C 0 1 N N R 8.781  21.579 185.104 5.346  1.280  0.128  C2  6MX 32 
6MX C1  C27 C 0 1 N N N 7.329  21.279 184.754 6.478  1.367  -0.898 C1  6MX 33 
6MX C   C28 C 0 1 N N N 6.739  20.407 185.836 7.764  1.725  -0.198 C   6MX 34 
6MX O1  O3  O 0 1 N N N 6.869  20.710 187.011 8.898  1.857  -0.905 O1  6MX 35 
6MX O   O4  O 0 1 N N N 6.068  19.302 185.526 7.774  1.893  0.998  O   6MX 36 
6MX H1  H1  H 0 1 N N N 16.170 22.716 181.157 -3.035 1.520  0.368  H1  6MX 37 
6MX H2  H2  H 0 1 N N N 17.257 25.451 180.656 -4.396 -0.954 1.113  H2  6MX 38 
6MX H3  H3  H 0 1 N N N 18.065 24.680 182.873 -4.947 1.172  2.265  H3  6MX 39 
6MX H4  H4  H 0 1 N N N 17.939 22.238 182.454 -6.129 2.956  1.013  H4  6MX 40 
6MX H5  H5  H 0 1 N N N 19.587 22.723 182.980 -4.497 2.689  0.356  H5  6MX 41 
6MX H6  H6  H 0 1 N N N 20.485 24.939 182.384 -6.688 -0.579 2.035  H6  6MX 42 
6MX H7  H7  H 0 1 N N N 19.501 26.089 181.417 -7.409 1.048  1.994  H7  6MX 43 
6MX H8  H8  H 0 1 N N N 22.148 25.110 180.622 -9.111 -0.746 -0.579 H8  6MX 44 
6MX H9  H9  H 0 1 N N N 21.109 22.560 179.591 -7.910 1.125  -1.694 H9  6MX 45 
6MX H10 H10 H 0 1 N N N 21.421 22.903 181.326 -8.123 2.043  -0.184 H10 6MX 46 
6MX H11 H11 H 0 1 N N N 19.678 21.142 181.055 -6.169 2.875  -1.465 H11 6MX 47 
6MX H12 H12 H 0 1 N N N 17.494 21.764 180.041 -5.619 0.750  -2.616 H12 6MX 48 
6MX H13 H13 H 0 1 N N N 18.825 21.912 178.843 -4.199 1.401  -1.763 H13 6MX 49 
6MX H14 H14 H 0 1 N N N 19.726 24.114 178.241 -6.390 -1.868 -0.084 H14 6MX 50 
6MX H15 H15 H 0 1 N N N 19.060 25.608 178.985 -6.898 -1.159 -1.636 H15 6MX 51 
6MX H16 H16 H 0 1 N N N 17.303 23.869 178.741 -4.437 -1.035 -1.365 H16 6MX 52 
6MX H17 H17 H 0 1 N N N 12.791 25.523 182.176 -1.408 2.396  0.165  H17 6MX 53 
6MX H18 H18 H 0 1 N N N 10.809 24.405 183.163 0.863  3.308  -0.112 H18 6MX 54 
6MX H19 H19 H 0 1 N N N 13.854 19.691 181.894 2.343  -2.261 -1.196 H19 6MX 55 
6MX H20 H20 H 0 1 N N N 15.867 19.337 184.186 1.610  -4.727 0.446  H20 6MX 56 
6MX H21 H21 H 0 1 N N N 14.172 19.908 184.354 1.433  -4.564 -1.317 H21 6MX 57 
6MX H22 H22 H 0 1 N N N 13.338 17.765 183.482 3.526  -5.760 -0.740 H22 6MX 58 
6MX H23 H23 H 0 1 N N N 14.402 17.493 184.903 3.877  -4.204 -1.530 H23 6MX 59 
6MX H24 H24 H 0 1 N N N 14.837 15.896 183.021 3.884  -4.714 1.480  H24 6MX 60 
6MX H25 H25 H 0 1 N N N 16.268 16.893 183.450 5.328  -4.543 0.453  H25 6MX 61 
6MX H26 H26 H 0 1 N N N 14.348 17.341 181.111 4.794  -2.411 1.601  H26 6MX 62 
6MX H27 H27 H 0 1 N N N 16.052 16.779 181.017 4.617  -2.248 -0.162 H27 6MX 63 
6MX H28 H28 H 0 1 N N N 16.826 18.924 181.963 2.701  -1.215 1.023  H28 6MX 64 
6MX H29 H29 H 0 1 N N N 15.847 19.197 180.482 2.350  -2.771 1.813  H29 6MX 65 
6MX H30 H30 H 0 1 N N N 10.730 19.763 183.365 3.059  3.666  0.753  H30 6MX 66 
6MX H31 H31 H 0 1 N N N 11.732 20.239 184.778 3.157  2.148  1.704  H31 6MX 67 
6MX H32 H32 H 0 1 N N N 8.957  19.449 184.795 5.334  3.460  -0.017 H32 6MX 68 
6MX H33 H33 H 0 1 N N N 9.915  20.085 186.175 5.467  2.837  1.659  H33 6MX 69 
6MX H34 H34 H 0 1 N N N 9.552  23.513 184.445 3.688  -0.106 -0.049 H34 6MX 70 
6MX H35 H35 H 0 1 N N N 8.814  22.527 183.137 4.233  0.591  -1.601 H35 6MX 71 
6MX H36 H36 H 0 1 N N N 8.826  22.067 186.089 5.623  0.611  0.942  H36 6MX 72 
6MX H37 H37 H 0 1 N N N 6.763  22.220 184.687 6.591  0.405  -1.396 H37 6MX 73 
6MX H38 H38 H 0 1 N N N 7.282  20.753 183.789 6.240  2.133  -1.636 H38 6MX 74 
6MX H39 H39 H 0 1 N N N 6.439  20.061 187.555 9.697  2.088  -0.412 H39 6MX 75 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
6MX C27 C19 SING N N 1  
6MX C27 C25 SING N N 2  
6MX C19 C20 SING N N 3  
6MX C19 C18 SING N N 4  
6MX C20 C21 SING N N 5  
6MX O3  C25 SING N N 6  
6MX C25 C26 SING N N 7  
6MX C25 C24 SING N N 8  
6MX C26 C21 SING N N 9  
6MX C18 N2  SING N N 10 
6MX C18 C23 SING N N 11 
6MX C21 C22 SING N N 12 
6MX N2  C17 SING N N 13 
6MX O2  C17 DOUB N N 14 
6MX C12 C13 SING N N 15 
6MX C12 C11 SING N N 16 
6MX C24 C23 SING N N 17 
6MX C13 C14 SING N N 18 
6MX C17 C9  SING N N 19 
6MX C23 C22 SING N N 20 
6MX C9  C8  DOUB Y N 21 
6MX C9  C10 SING Y N 22 
6MX S   C11 SING N N 23 
6MX S   C10 SING N N 24 
6MX C11 C16 SING N N 25 
6MX C8  C7  SING Y N 26 
6MX C10 N1  DOUB Y N 27 
6MX C7  C6  DOUB Y N 28 
6MX C14 C15 SING N N 29 
6MX N1  C6  SING Y N 30 
6MX C6  N   SING N N 31 
6MX C16 C15 SING N N 32 
6MX N   C5  SING N N 33 
6MX N   C4  SING N N 34 
6MX C5  C2  SING N N 35 
6MX C4  C3  SING N N 36 
6MX C1  C2  SING N N 37 
6MX C1  C   SING N N 38 
6MX C2  C3  SING N N 39 
6MX O   C   DOUB N N 40 
6MX C   O1  SING N N 41 
6MX N2  H1  SING N N 42 
6MX C18 H2  SING N N 43 
6MX C23 H3  SING N N 44 
6MX C22 H4  SING N N 45 
6MX C22 H5  SING N N 46 
6MX C24 H6  SING N N 47 
6MX C24 H7  SING N N 48 
6MX O3  H8  SING N N 49 
6MX C26 H9  SING N N 50 
6MX C26 H10 SING N N 51 
6MX C21 H11 SING N N 52 
6MX C20 H12 SING N N 53 
6MX C20 H13 SING N N 54 
6MX C27 H14 SING N N 55 
6MX C27 H15 SING N N 56 
6MX C19 H16 SING N N 57 
6MX C8  H17 SING N N 58 
6MX C7  H18 SING N N 59 
6MX C11 H19 SING N N 60 
6MX C16 H20 SING N N 61 
6MX C16 H21 SING N N 62 
6MX C15 H22 SING N N 63 
6MX C15 H23 SING N N 64 
6MX C14 H24 SING N N 65 
6MX C14 H25 SING N N 66 
6MX C13 H26 SING N N 67 
6MX C13 H27 SING N N 68 
6MX C12 H28 SING N N 69 
6MX C12 H29 SING N N 70 
6MX C4  H30 SING N N 71 
6MX C4  H31 SING N N 72 
6MX C3  H32 SING N N 73 
6MX C3  H33 SING N N 74 
6MX C5  H34 SING N N 75 
6MX C5  H35 SING N N 76 
6MX C2  H36 SING N N 77 
6MX C1  H37 SING N N 78 
6MX C1  H38 SING N N 79 
6MX O1  H39 SING N N 80 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
6MX InChI            InChI                1.03  
"InChI=1S/C28H39N3O4S/c32-24(33)12-17-8-9-31(16-17)23-7-6-22(27(29-23)36-21-4-2-1-3-5-21)26(34)30-25-19-10-18-11-20(25)15-28(35,13-18)14-19/h6-7,17-21,25,35H,1-5,8-16H2,(H,30,34)(H,32,33)/t17-,18-,19-,20+,25-,28-/m1/s1" 
6MX InChIKey         InChI                1.03  IYMNIQIFFGLPGI-MYDIHDSKSA-N 
6MX SMILES_CANONICAL CACTVS               3.385 "OC(=O)C[C@H]1CCN(C1)c2ccc(C(=O)N[C@H]3[C@H]4CC5C[C@@H]3CC(O)(C5)C4)c(SC6CCCCC6)n2" 
6MX SMILES           CACTVS               3.385 "OC(=O)C[CH]1CCN(C1)c2ccc(C(=O)N[CH]3[CH]4CC5C[CH]3CC(O)(C5)C4)c(SC6CCCCC6)n2" 
6MX SMILES_CANONICAL "OpenEye OEToolkits" 2.0.5 "c1cc(nc(c1C(=O)NC2[C@@H]3CC4C[C@H]2CC(C3)(C4)O)SC5CCCCC5)N6CC[C@@H](C6)CC(=O)O" 
6MX SMILES           "OpenEye OEToolkits" 2.0.5 "c1cc(nc(c1C(=O)NC2C3CC4CC2CC(C4)(C3)O)SC5CCCCC5)N6CCC(C6)CC(=O)O" 
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
6MX "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.5 "2-[(3~{R})-1-[6-cyclohexylsulfanyl-5-[[(1~{R},3~{S})-5-oxidanyl-2-adamantyl]carbamoyl]pyridin-2-yl]pyrrolidin-3-yl]ethanoic acid" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
6MX "Create component" 2016-05-30 EBI  
6MX "Initial release"  2016-12-14 RCSB 
# 
