data_68X
# 
_chem_comp.id                                    68X 
_chem_comp.name                                  "(2~{Z},9~{E})-~{N}-[(2~{R},3~{S},4~{R},5~{S},6~{S})-6-(hydroxymethyl)-2,4,5-tris(oxidanyl)oxan-3-yl]hexadeca-2,9-dienamide" 
_chem_comp.type                                  non-polymer 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C22 H39 N O6" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2023-01-12 
_chem_comp.pdbx_modified_date                    2024-05-31 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        413.548 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     68X 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        8HW8 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  PDBC 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.pdbx_backbone_atom_flag 
_chem_comp_atom.pdbx_n_terminal_atom_flag 
_chem_comp_atom.pdbx_c_terminal_atom_flag 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
68X C4  C1  C 0 1 N N S N N N 13.754 -2.565 24.819 -7.254 0.073  -0.492 C4  68X 1  
68X C5  C2  C 0 1 N N S N N N 13.476 -1.358 25.735 -6.873 1.343  0.273  C5  68X 2  
68X C6  C3  C 0 1 N N N N N N 12.768 -1.774 27.027 -7.705 2.519  -0.242 C6  68X 3  
68X O6  O1  O 0 1 N N N N N N 12.888 -0.721 27.948 -7.433 3.677  0.549  O6  68X 4  
68X C2  C4  C 0 1 N N S N N N 12.212 -1.432 23.070 -4.903 -0.711 -0.207 C2  68X 5  
68X N2  N1  N 0 1 N N N N N N 13.044 -0.834 22.047 -4.052 -1.782 0.316  N2  68X 6  
68X C01 C5  C 0 1 N N N N N N 11.588 -0.674 19.653 -1.947 -3.019 0.363  C01 68X 7  
68X C1  C6  C 0 1 N N R N N N 11.835 -0.450 24.181 -4.612 0.589  0.547  C1  68X 8  
68X O01 O2  O 0 1 N N N N N N 11.538 0.788  23.576 -4.827 0.387  1.945  O01 68X 9  
68X C02 C7  C 0 1 N N N N N N 10.285 -0.822 19.826 -0.672 -3.095 -0.006 C02 68X 10 
68X C03 C8  C 0 1 N N N N N N 9.576  -0.983 21.162 -0.019 -1.930 -0.704 C03 68X 11 
68X C3  C9  C 0 1 N N R N N N 12.859 -2.718 23.588 -6.376 -1.087 -0.013 C3  68X 12 
68X O03 O3  O 0 1 N N N N N N 13.649 -3.229 22.552 -6.626 -1.336 1.372  O03 68X 13 
68X C04 C10 C 0 1 N N N N N N 8.895  -2.340 21.212 1.305  -1.597 -0.013 C04 68X 14 
68X O4  O4  O 0 1 N N N N N N 13.654 -3.756 25.561 -7.051 0.280  -1.891 O4  68X 15 
68X C05 C11 C 0 1 N N N N N N 9.839  -3.384 21.781 1.968  -0.415 -0.722 C05 68X 16 
68X O5  O5  O 0 1 N N N N N N 12.847 -0.248 25.128 -5.484 1.618  0.075  O5  68X 17 
68X C06 C12 C 0 1 N N N N N N 10.445 -4.031 20.544 3.292  -0.082 -0.030 C06 68X 18 
68X C07 C13 C 0 1 N N N N N N 11.872 -4.555 20.605 3.954  1.100  -0.739 C07 68X 19 
68X C7  C14 C 0 1 N N N N N N 12.781 -0.537 20.627 -2.802 -1.944 -0.162 C7  68X 20 
68X O7  O6  O 0 1 N N N N N N 13.685 -0.058 20.102 -2.381 -1.201 -1.028 O7  68X 21 
68X C08 C15 C 0 1 N N N N N N 12.645 -3.908 19.453 5.258  1.428  -0.058 C08 68X 22 
68X C09 C16 C 0 1 N N N N N N 12.813 -4.578 18.325 6.368  1.466  -0.752 C09 68X 23 
68X C10 C17 C 0 1 N N N N N N 13.580 -4.007 17.129 7.672  1.793  -0.071 C10 68X 24 
68X C11 C18 C 0 1 N N N N N N 14.178 -2.635 17.421 8.685  0.679  -0.345 C11 68X 25 
68X C12 C19 C 0 1 N N N N N N 15.632 -2.715 17.909 10.008 1.012  0.346  C12 68X 26 
68X C13 C20 C 0 1 N N N N N N 15.712 -2.193 19.348 11.021 -0.102 0.072  C13 68X 27 
68X C14 C21 C 0 1 N N N N N N 15.853 -3.316 20.379 12.345 0.231  0.763  C14 68X 28 
68X C15 C22 C 0 1 N N N N N N 17.240 -3.287 21.021 13.357 -0.883 0.489  C15 68X 29 
68X H1  H1  H 0 1 N N N N N N 14.788 -2.462 24.457 -8.303 -0.162 -0.307 H1  68X 30 
68X H2  H2  H 0 1 N N N N N N 14.470 -1.012 26.055 -7.066 1.198  1.336  H2  68X 31 
68X H3  H3  H 0 1 N N N N N N 11.705 -1.972 26.823 -7.445 2.720  -1.281 H3  68X 32 
68X H4  H4  H 0 1 N N N N N N 13.238 -2.681 27.434 -8.764 2.272  -0.173 H4  68X 33 
68X H5  H5  H 0 1 N N N N N N 12.454 -0.958 28.759 -7.927 4.463  0.279  H5  68X 34 
68X H6  H6  H 0 1 N N N N N N 11.269 -1.732 22.590 -4.701 -0.569 -1.269 H6  68X 35 
68X H7  H7  H 0 1 N N N N N N 13.959 -0.577 22.359 -4.387 -2.375 1.007  H7  68X 36 
68X H8  H8  H 0 1 N N N N N N 11.880 -0.642 18.614 -2.355 -3.747 1.049  H8  68X 37 
68X H9  H9  H 0 1 N N N N N N 10.935 -0.837 24.681 -3.577 0.884  0.377  H9  68X 38 
68X H10 H10 H 0 1 N N N N N N 11.300 1.419  24.245 -4.661 1.171  2.486  H10 68X 39 
68X H11 H11 H 0 1 N N N N N N 9.669  -0.829 18.939 -0.104 -3.991 0.195  H11 68X 40 
68X H12 H12 H 0 1 N N N N N N 10.310 -0.911 21.978 0.171  -2.190 -1.746 H12 68X 41 
68X H13 H13 H 0 1 N N N N N N 8.822  -0.190 21.275 -0.679 -1.064 -0.661 H13 68X 42 
68X H14 H14 H 0 1 N N N N N N 12.057 -3.430 23.834 -6.604 -1.981 -0.593 H14 68X 43 
68X H15 H15 H 0 1 N N N N N N 14.068 -4.032 22.839 -7.541 -1.580 1.568  H15 68X 44 
68X H16 H16 H 0 1 N N N N N N 8.001  -2.274 21.849 1.115  -1.337 1.029  H16 68X 45 
68X H17 H17 H 0 1 N N N N N N 8.599  -2.635 20.194 1.965  -2.464 -0.056 H17 68X 46 
68X H18 H18 H 0 1 N N N N N N 14.200 -3.694 26.336 -7.574 1.004  -2.262 H18 68X 47 
68X H19 H19 H 0 1 N N N N N N 9.290  -4.124 22.382 2.157  -0.675 -1.763 H19 68X 48 
68X H20 H20 H 0 1 N N N N N N 10.618 -2.914 22.400 1.308  0.451  -0.678 H20 68X 49 
68X H21 H21 H 0 1 N N N N N N 10.412 -3.281 19.740 3.102  0.178  1.011  H21 68X 50 
68X H22 H22 H 0 1 N N N N N N 9.801  -4.882 20.278 3.952  -0.948 -0.074 H22 68X 51 
68X H23 H23 H 0 1 N N N N N N 11.876 -5.649 20.493 4.144  0.840  -1.780 H23 68X 52 
68X H24 H24 H 0 1 N N N N N N 12.332 -4.283 21.566 3.294  1.967  -0.696 H24 68X 53 
68X H25 H25 H 0 1 N N N N N N 13.050 -2.913 19.560 5.277  1.632  1.003  H25 68X 54 
68X H26 H26 H 0 1 N N N N N N 12.392 -5.569 18.244 6.349  1.262  -1.813 H26 68X 55 
68X H27 H27 H 0 1 N N N N N N 12.890 -3.917 16.277 8.057  2.737  -0.457 H27 68X 56 
68X H28 H28 H 0 1 N N N N N N 14.395 -4.699 16.869 7.509  1.879  1.003  H28 68X 57 
68X H29 H29 H 0 1 N N N N N N 14.148 -2.035 16.500 8.300  -0.265 0.041  H29 68X 58 
68X H30 H30 H 0 1 N N N N N N 13.572 -2.145 18.198 8.848  0.593  -1.420 H30 68X 59 
68X H31 H31 H 0 1 N N N N N N 15.973 -3.760 17.878 10.393 1.956  -0.040 H31 68X 60 
68X H32 H32 H 0 1 N N N N N N 16.272 -2.101 17.259 9.845  1.098  1.421  H32 68X 61 
68X H33 H33 H 0 1 N N N N N N 16.583 -1.527 19.432 10.636 -1.046 0.458  H33 68X 62 
68X H34 H34 H 0 1 N N N N N N 14.795 -1.627 19.568 11.184 -0.188 -1.002 H34 68X 63 
68X H35 H35 H 0 1 N N N N N N 15.090 -3.187 21.161 12.729 1.175  0.377  H35 68X 64 
68X H36 H36 H 0 1 N N N N N N 15.706 -4.285 19.880 12.182 0.317  1.838  H36 68X 65 
68X H37 H37 H 0 1 N N N N N N 17.321 -4.100 21.757 12.973 -1.827 0.875  H37 68X 66 
68X H38 H38 H 0 1 N N N N N N 18.007 -3.419 20.243 13.520 -0.969 -0.585 H38 68X 67 
68X H39 H39 H 0 1 N N N N N N 17.391 -2.321 21.524 14.300 -0.646 0.982  H39 68X 68 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
68X C10 C11 SING N N 1  
68X C10 C09 SING N N 2  
68X C11 C12 SING N N 3  
68X C12 C13 SING N N 4  
68X C09 C08 DOUB N E 5  
68X C13 C14 SING N N 6  
68X C08 C07 SING N N 7  
68X C01 C02 DOUB N Z 8  
68X C01 C7  SING N N 9  
68X C02 C03 SING N N 10 
68X O7  C7  DOUB N N 11 
68X C14 C15 SING N N 12 
68X C06 C07 SING N N 13 
68X C06 C05 SING N N 14 
68X C7  N2  SING N N 15 
68X C03 C04 SING N N 16 
68X C04 C05 SING N N 17 
68X N2  C2  SING N N 18 
68X O03 C3  SING N N 19 
68X C2  C3  SING N N 20 
68X C2  C1  SING N N 21 
68X O01 C1  SING N N 22 
68X C3  C4  SING N N 23 
68X C1  O5  SING N N 24 
68X C4  O4  SING N N 25 
68X C4  C5  SING N N 26 
68X O5  C5  SING N N 27 
68X C5  C6  SING N N 28 
68X C6  O6  SING N N 29 
68X C4  H1  SING N N 30 
68X C5  H2  SING N N 31 
68X C6  H3  SING N N 32 
68X C6  H4  SING N N 33 
68X O6  H5  SING N N 34 
68X C2  H6  SING N N 35 
68X N2  H7  SING N N 36 
68X C01 H8  SING N N 37 
68X C1  H9  SING N N 38 
68X O01 H10 SING N N 39 
68X C02 H11 SING N N 40 
68X C03 H12 SING N N 41 
68X C03 H13 SING N N 42 
68X C3  H14 SING N N 43 
68X O03 H15 SING N N 44 
68X C04 H16 SING N N 45 
68X C04 H17 SING N N 46 
68X O4  H18 SING N N 47 
68X C05 H19 SING N N 48 
68X C05 H20 SING N N 49 
68X C06 H21 SING N N 50 
68X C06 H22 SING N N 51 
68X C07 H23 SING N N 52 
68X C07 H24 SING N N 53 
68X C08 H25 SING N N 54 
68X C09 H26 SING N N 55 
68X C10 H27 SING N N 56 
68X C10 H28 SING N N 57 
68X C11 H29 SING N N 58 
68X C11 H30 SING N N 59 
68X C12 H31 SING N N 60 
68X C12 H32 SING N N 61 
68X C13 H33 SING N N 62 
68X C13 H34 SING N N 63 
68X C14 H35 SING N N 64 
68X C14 H36 SING N N 65 
68X C15 H37 SING N N 66 
68X C15 H38 SING N N 67 
68X C15 H39 SING N N 68 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
68X InChI            InChI                1.06  "InChI=1S/C22H39NO6/c1-2-3-4-5-6-7-8-9-10-11-12-13-14-15-18(25)23-19-21(27)20(26)17(16-24)29-22(19)28/h7-8,14-15,17,19-22,24,26-28H,2-6,9-13,16H2,1H3,(H,23,25)/b8-7+,15-14-/t17-,19-,20+,21+,22+/m0/s1" 
68X InChIKey         InChI                1.06  BQDHAOHXPSOCQH-OQVMBZPUSA-N                                                                                                                                                                              
68X SMILES_CANONICAL CACTVS               3.385 "CCCCCC\C=C\CCCCC\C=C/C(=O)N[C@@H]1[C@H](O)O[C@@H](CO)[C@@H](O)[C@@H]1O"                                                                                                                                 
68X SMILES           CACTVS               3.385 "CCCCCCC=CCCCCCC=CC(=O)N[CH]1[CH](O)O[CH](CO)[CH](O)[CH]1O"                                                                                                                                              
68X SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "CCCCCC/C=C/CCCCC/C=C\C(=O)N[C@H]1[C@H]([C@@H]([C@@H](O[C@H]1O)CO)O)O"                                                                                                                                   
68X SMILES           "OpenEye OEToolkits" 2.0.7 "CCCCCCC=CCCCCCC=CC(=O)NC1C(C(C(OC1O)CO)O)O"                                                                                                                                                             
# 
_pdbx_chem_comp_identifier.comp_id           68X 
_pdbx_chem_comp_identifier.type              "SYSTEMATIC NAME" 
_pdbx_chem_comp_identifier.program           "OpenEye OEToolkits" 
_pdbx_chem_comp_identifier.program_version   2.0.7 
_pdbx_chem_comp_identifier.identifier        "(2~{Z},9~{E})-~{N}-[(2~{R},3~{S},4~{R},5~{S},6~{S})-6-(hydroxymethyl)-2,4,5-tris(oxidanyl)oxan-3-yl]hexadeca-2,9-dienamide" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
68X "Create component" 2023-01-12 PDBC 
68X "Initial release"  2024-06-05 RCSB 
# 
