data_56X
#

_chem_comp.id                                   56X
_chem_comp.name                                 "(4R,5S,6S)-6-((R)-1-hydroxyethyl)-3-((2-isopropoxy-2-oxoethyl)thio)-4-methyl-7-oxo-1-azabicyclo[3.2.0]hept-2-ene-2-carboxylic acid"
_chem_comp.type                                 non-polymer
_chem_comp.pdbx_type                            HETAIN
_chem_comp.formula                              "C15 H21 N O6 S"
_chem_comp.mon_nstd_parent_comp_id              ?
_chem_comp.pdbx_synonyms                        ?
_chem_comp.pdbx_formal_charge                   0
_chem_comp.pdbx_initial_date                    2021-08-12
_chem_comp.pdbx_modified_date                   2022-05-06
_chem_comp.pdbx_ambiguous_flag                  N
_chem_comp.pdbx_release_status                  REL
_chem_comp.pdbx_replaced_by                     ?
_chem_comp.pdbx_replaces                        ?
_chem_comp.formula_weight                       343.395
_chem_comp.one_letter_code                      ?
_chem_comp.three_letter_code                    56X
_chem_comp.pdbx_model_coordinates_details       ?
_chem_comp.pdbx_model_coordinates_missing_flag  N
_chem_comp.pdbx_ideal_coordinates_details       Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag  N
_chem_comp.pdbx_model_coordinates_db_code       7F8P
_chem_comp.pdbx_subcomponent_list               ?
_chem_comp.pdbx_processing_site                 PDBJ
#   #
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
56X  C10  C1   C  0  1  N  N  S   3.550   1.543  71.049   3.602   0.743  -0.120  C10  56X   1  
56X  C13  C2   C  0  1  N  N  R   3.940   2.929  71.640   4.860   1.368   0.485  C13  56X   2  
56X  C15  C3   C  0  1  N  N  N   5.425  -0.956  70.141   1.158  -1.089   0.286  C15  56X   3  
56X  C17  C4   C  0  1  N  N  N   3.283   4.030  70.824   6.031   1.196  -0.484  C17  56X   4  
56X  C20  C5   C  0  1  N  N  N   8.496  -2.640  72.695  -3.693   0.356  -0.184  C20  56X   5  
56X  C21  C6   C  0  1  N  N  N  10.839  -1.777  72.636  -6.032   0.701   0.112  C21  56X   6  
56X  C22  C7   C  0  1  N  N  N  11.098  -2.407  73.991  -6.591  -0.578   0.739  C22  56X   7  
56X  C09  C8   C  0  1  N  N  S   4.256   0.431  71.606   2.362   0.861   0.777  C09  56X   8  
56X  C11  C9   C  0  1  N  N  R   3.733  -1.097  71.700   1.071   1.221   0.027  C11  56X   9  
56X  C12  C10  C  0  1  N  N  N   4.045   1.260  69.657   3.502  -0.754   0.095  C12  56X  10  
56X  C14  C11  C  0  1  N  N  N   4.781  -1.776  71.242   0.380  -0.103  -0.201  C14  56X  11  
56X  C16  C12  C  0  1  N  N  N   2.438  -1.373  70.812   1.399   1.891  -1.309  C16  56X  12  
56X  C18  C13  C  0  1  N  N  N   6.412  -1.529  69.088   0.800  -2.457   0.253  C18  56X  13  
56X  C19  C14  C  0  1  N  N  N   7.352  -3.283  71.927  -2.250   0.524   0.220  C19  56X  14  
56X  C23  C15  C  0  1  N  N  N  12.108  -2.096  71.837  -6.890   1.895   0.537  C23  56X  15  
56X  N8   N1   N  0  1  N  N  N   4.751   0.205  70.257   2.363  -0.615   0.830  N8   56X  16  
56X  O2   O1   O  0  1  N  N  N   3.924   1.750  68.586   4.172  -1.703  -0.252  O2   56X  17  
56X  O3   O2   O  0  1  N  N  N   3.499   3.034  72.958   4.636   2.760   0.718  O3   56X  18  
56X  O4   O3   O  0  1  N  N  N   7.473  -2.024  69.533  -0.421  -2.825  -0.193  O4   56X  19  
56X  O5   O4   O  0  1  N  N  N   6.266  -1.594  67.821   1.592  -3.303   0.626  O5   56X  20  
56X  O6   O5   O  0  1  N  N  N   9.684  -2.289  72.005  -4.666   0.903   0.561  O6   56X  21  
56X  O7   O6   O  0  1  N  N  N   8.294  -2.464  73.848  -3.973  -0.272  -1.178  O7   56X  22  
56X  S1   S1   S  0  1  N  N  N   5.782  -2.595  72.522  -1.187  -0.322  -0.976  S1   56X  23  
56X  H1   H1   H  0  1  N  N  N   2.460   1.404  71.108   3.428   1.051  -1.151  H1   56X  24  
56X  H2   H2   H  0  1  N  N  N   5.033   3.041  71.582   5.094   0.874   1.428  H2   56X  25  
56X  H4   H4   H  0  1  N  N  N   3.558   5.010  71.241   5.798   1.689  -1.428  H4   56X  26  
56X  H5   H5   H  0  1  N  N  N   3.625   3.967  69.780   6.928   1.641  -0.054  H5   56X  27  
56X  H6   H6   H  0  1  N  N  N   2.190   3.910  70.860   6.203   0.134  -0.662  H6   56X  28  
56X  H7   H7   H  0  1  N  N  N  10.761  -0.686  72.757  -6.048   0.610  -0.974  H7   56X  29  
56X  H8   H8   H  0  1  N  N  N  10.234  -2.232  74.649  -7.616  -0.729   0.403  H8   56X  30  
56X  H9   H9   H  0  1  N  N  N  11.252  -3.489  73.869  -5.979  -1.428   0.437  H9   56X  31  
56X  H10  H10  H  0  1  N  N  N  11.996  -1.957  74.439  -6.575  -0.487   1.825  H10  56X  32  
56X  H11  H11  H  0  1  N  N  N   5.020   0.670  72.361   2.508   1.393   1.717  H11  56X  33  
56X  H14  H14  H  0  1  N  N  N   1.589  -0.800  71.213   1.879   1.169  -1.970  H14  56X  34  
56X  H15  H15  H  0  1  N  N  N   2.632  -1.063  69.775   0.479   2.251  -1.771  H15  56X  35  
56X  H16  H16  H  0  1  N  N  N   2.199  -2.447  70.835   2.073   2.731  -1.139  H16  56X  36  
56X  H17  H17  H  0  1  N  N  N   7.364  -4.371  72.090  -2.000   1.584   0.241  H17  56X  37  
56X  H18  H18  H  0  1  N  N  N   7.464  -3.072  70.853  -2.098   0.094   1.209  H18  56X  38  
56X  H19  H19  H  0  1  N  N  N  12.984  -1.682  72.358  -6.874   1.985   1.623  H19  56X  39  
56X  H20  H20  H  0  1  N  N  N  12.218  -3.187  71.744  -6.492   2.806   0.090  H20  56X  40  
56X  H21  H21  H  0  1  N  N  N  12.033  -1.648  70.835  -7.916   1.743   0.200  H21  56X  41  
56X  H22  H22  H  0  1  N  N  N   3.901   2.352  73.482   4.422   3.263  -0.080  H22  56X  42  
56X  H23  H23  H  0  1  N  N  N   7.989  -2.368  68.813  -0.546  -3.782  -0.250  H23  56X  43  
56X  H3   H3   H  0  1  N  N  N   3.501  -1.326  72.751   0.447   1.876   0.636  H3   56X  44  
#   #
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
56X  O5   C18  DOUB  N  N   1  
56X  O2   C12  DOUB  N  N   2  
56X  C18  O4   SING  N  N   3  
56X  C18  C15  SING  N  N   4  
56X  C12  N8   SING  N  N   5  
56X  C12  C10  SING  N  N   6  
56X  C15  N8   SING  N  N   7  
56X  C15  C14  DOUB  N  N   8  
56X  N8   C09  SING  N  N   9  
56X  C16  C11  SING  N  N  10  
56X  C17  C13  SING  N  N  11  
56X  C10  C09  SING  N  N  12  
56X  C10  C13  SING  N  N  13  
56X  C14  C11  SING  N  N  14  
56X  C14  S1   SING  N  N  15  
56X  C09  C11  SING  N  N  16  
56X  C13  O3   SING  N  N  17  
56X  C23  C21  SING  N  N  18  
56X  C19  S1   SING  N  N  19  
56X  C19  C20  SING  N  N  20  
56X  O6   C21  SING  N  N  21  
56X  O6   C20  SING  N  N  22  
56X  C21  C22  SING  N  N  23  
56X  C20  O7   DOUB  N  N  24  
56X  C10  H1   SING  N  N  25  
56X  C13  H2   SING  N  N  26  
56X  C17  H4   SING  N  N  27  
56X  C17  H5   SING  N  N  28  
56X  C17  H6   SING  N  N  29  
56X  C21  H7   SING  N  N  30  
56X  C22  H8   SING  N  N  31  
56X  C22  H9   SING  N  N  32  
56X  C22  H10  SING  N  N  33  
56X  C09  H11  SING  N  N  34  
56X  C16  H14  SING  N  N  35  
56X  C16  H15  SING  N  N  36  
56X  C16  H16  SING  N  N  37  
56X  C19  H17  SING  N  N  38  
56X  C19  H18  SING  N  N  39  
56X  C23  H19  SING  N  N  40  
56X  C23  H20  SING  N  N  41  
56X  C23  H21  SING  N  N  42  
56X  O3   H22  SING  N  N  43  
56X  O4   H23  SING  N  N  44  
56X  C11  H3   SING  N  N  45  
#   #
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
56X  InChI             InChI                 1.03   "InChI=1S/C15H21NO6S/c1-6(2)22-9(18)5-23-13-7(3)11-10(8(4)17)14(19)16(11)12(13)15(20)21/h6-8,10-11,17H,5H2,1-4H3,(H,20,21)/t7-,8-,10-,11-/m1/s1"  
56X  InChIKey          InChI                 1.03   ZNVHAIJDJMRLJY-YJFSRANCSA-N  
56X  SMILES_CANONICAL  CACTVS                3.385  "CC(C)OC(=O)CSC1=C(N2[C@H]([C@H]1C)[C@@H]([C@@H](C)O)C2=O)C(O)=O"  
56X  SMILES            CACTVS                3.385  "CC(C)OC(=O)CSC1=C(N2[CH]([CH]1C)[CH]([CH](C)O)C2=O)C(O)=O"  
56X  SMILES_CANONICAL  "OpenEye OEToolkits"  2.0.7  "C[C@@H]1[C@@H]2[C@H](C(=O)N2C(=C1SCC(=O)OC(C)C)C(=O)O)[C@@H](C)O"  
56X  SMILES            "OpenEye OEToolkits"  2.0.7  "CC1C2C(C(=O)N2C(=C1SCC(=O)OC(C)C)C(=O)O)C(C)O"  
#
_pdbx_chem_comp_identifier.comp_id          56X
_pdbx_chem_comp_identifier.type             "SYSTEMATIC NAME"
_pdbx_chem_comp_identifier.program          "OpenEye OEToolkits"
_pdbx_chem_comp_identifier.program_version  2.0.7
_pdbx_chem_comp_identifier.identifier       "(4~{R},5~{S},6~{S})-4-methyl-6-[(1~{R})-1-oxidanylethyl]-7-oxidanylidene-3-(2-oxidanylidene-2-propan-2-yloxy-ethyl)sulfanyl-1-azabicyclo[3.2.0]hept-2-ene-2-carboxylic acid"
#   #
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
56X  "Create component"  2021-08-12  PDBJ  
56X  "Initial release"   2022-05-11  RCSB  
##
