data_42X
# 
_chem_comp.id                                    42X 
_chem_comp.name                                  "N~3~-[(2R)-2-hydroxy-3,3-dimethyl-4-(phosphonooxy)butanoyl]-N-[2-(propanoylamino)ethyl]-beta-alaninamide" 
_chem_comp.type                                  NON-POLYMER 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C14 H28 N3 O8 P" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2015-01-23 
_chem_comp.pdbx_modified_date                    2024-09-27 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        397.361 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     42X 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        4XS9 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  RCSB 
_chem_comp.pdbx_pcm                              Y 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.pdbx_backbone_atom_flag 
_chem_comp_atom.pdbx_n_terminal_atom_flag 
_chem_comp_atom.pdbx_c_terminal_atom_flag 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
42X C14 C1  C 0 1 N N N N N N 12.671 108.040 320.538 -2.993 -0.758 2.069  C14 42X 1  
42X C10 C2  C 0 1 N N N N N N 12.218 110.461 320.339 -5.374 -1.434 1.727  C10 42X 2  
42X O01 O1  O 0 1 N N N N N N 13.679 108.459 325.302 -6.128 2.249  -1.229 O01 42X 3  
42X P02 P1  P 0 1 N N N N N N 14.878 108.652 324.383 -4.890 2.464  -0.222 P02 42X 4  
42X O03 O2  O 0 1 N N N N N N 15.801 107.446 324.502 -3.680 2.820  -0.997 O03 42X 5  
42X O04 O3  O 0 1 N N N N N N 15.648 109.880 324.823 -5.235 3.651  0.808  O04 42X 6  
42X O05 O4  O 0 1 N N N N N N 14.411 108.756 322.854 -4.621 1.104  0.596  O05 42X 7  
42X C06 C3  C 0 1 N N N N N N 13.471 109.666 322.348 -4.188 -0.107 -0.027 C06 42X 8  
42X C09 C4  C 0 1 N N N N N N 13.219 109.441 320.836 -4.031 -1.199 1.034  C09 42X 9  
42X C18 C5  C 0 1 N N R N N N 14.512 109.703 320.015 -3.567 -2.495 0.367  C18 42X 10 
42X O20 O5  O 0 1 N N N N N N 14.990 110.966 320.291 -4.594 -2.978 -0.501 O20 42X 11 
42X C22 C6  C 0 1 N N N N N N 15.621 108.709 320.223 -2.318 -2.230 -0.433 C22 42X 12 
42X O23 O6  O 0 1 N N N N N N 15.586 107.611 319.702 -2.348 -2.291 -1.643 O23 42X 13 
42X N24 N1  N 0 1 N N N N N N 16.773 109.085 321.048 -1.166 -1.924 0.198  N24 42X 14 
42X C26 C7  C 0 1 N N N N N N 17.882 108.176 321.285 0.024  -1.572 -0.580 C26 42X 15 
42X C29 C8  C 0 1 N N N N N N 19.133 109.022 321.408 1.184  -1.272 0.371  C29 42X 16 
42X C32 C9  C 0 1 N N N N N N 19.623 109.412 320.027 2.409  -0.909 -0.429 C32 42X 17 
42X O33 O7  O 0 1 N N N N N N 19.478 108.662 319.061 2.358  -0.892 -1.641 O33 42X 18 
42X N34 N2  N 0 1 N N N N N N 20.275 110.680 319.810 3.560  -0.604 0.201  N34 42X 19 
42X C36 C10 C 0 1 N N N N N N 20.737 110.973 318.441 4.750  -0.251 -0.577 C36 42X 20 
42X C39 C11 C 0 1 N N N N N N 22.177 110.520 318.319 5.911  0.049  0.374  C39 42X 21 
42X N42 N3  N 0 1 N N N N N N 22.928 111.152 319.396 7.101  0.401  -0.404 N42 42X 22 
42X C44 C12 C 0 1 N N N N N N 23.759 112.321 319.113 8.252  0.706  0.227  C44 42X 23 
42X O45 O8  O 0 1 N N N N N N 23.834 112.754 317.973 8.303  0.689  1.439  O45 42X 24 
42X C46 C13 C 0 1 N N N N N N 24.490 112.968 320.218 9.477  1.069  -0.573 C46 42X 25 
42X C49 C14 C 0 1 N N N N N N 23.612 114.026 320.820 10.637 1.369  0.378  C49 42X 26 
42X H1  H1  H 0 1 N N N N N N 11.757 107.870 321.126 -2.797 -1.579 2.759  H1  42X 27 
42X H2  H2  H 0 1 N N N N N N 12.438 107.958 319.466 -2.069 -0.481 1.561  H2  42X 28 
42X H3  H3  H 0 1 N N N N N N 13.425 107.286 320.808 -3.375 0.099  2.623  H3  42X 29 
42X H4  H4  H 0 1 N N N N N N 11.268 110.337 320.879 -5.734 -0.496 2.150  H4  42X 30 
42X H5  H5  H 0 1 N N N N N N 12.609 111.474 320.514 -6.097 -1.805 1.001  H5  42X 31 
42X H6  H6  H 0 1 N N N N N N 12.049 110.314 319.262 -5.249 -2.167 2.523  H6  42X 32 
42X H7  H7  H 0 1 N N N N N N 13.758 107.628 325.756 -6.956 2.013  -0.789 H7  42X 33 
42X H8  H8  H 0 1 N N N N N N 16.529 109.629 325.074 -5.409 4.503  0.384  H8  42X 34 
42X H9  H9  H 0 1 N N N N N N 13.846 110.689 322.499 -4.927 -0.421 -0.764 H9  42X 35 
42X H10 H10 H 0 1 N N N N N N 12.523 109.539 322.891 -3.231 0.060  -0.521 H10 42X 36 
42X H11 H11 H 0 1 N N N N N N 14.227 109.655 318.954 -3.357 -3.242 1.132  H11 42X 37 
42X H12 H12 H 0 1 N N N N N N 14.297 111.603 320.163 -4.833 -2.363 -1.208 H12 42X 38 
42X H13 H13 H 0 1 N N N N N N 16.797 109.996 321.461 -1.126 -1.938 1.167  H13 42X 39 
42X H14 H14 H 0 1 N N N N N N 17.715 107.612 322.214 0.293  -2.404 -1.230 H14 42X 40 
42X H15 H15 H 0 1 N N N N N N 17.982 107.475 320.443 -0.186 -0.690 -1.186 H15 42X 41 
42X H16 H16 H 0 1 N N N N N N 19.915 108.446 321.924 0.916  -0.439 1.021  H16 42X 42 
42X H17 H17 H 0 1 N N N N N N 18.905 109.930 321.985 1.395  -2.153 0.977  H17 42X 43 
42X H18 H18 H 0 1 N N N N N N 20.408 111.332 320.556 3.601  -0.618 1.170  H18 42X 44 
42X H19 H19 H 0 1 N N N N N N 20.669 112.054 318.249 5.019  -1.084 -1.227 H19 42X 45 
42X H20 H20 H 0 1 N N N N N N 20.114 110.432 317.714 4.540  0.630  -1.183 H20 42X 46 
42X H21 H21 H 0 1 N N N N N N 22.236 109.426 318.412 5.642  0.881  1.025  H21 42X 47 
42X H22 H22 H 0 1 N N N N N N 22.586 110.827 317.345 6.121  -0.833 0.980  H22 42X 48 
42X H23 H23 H 0 1 N N N N N N 22.875 110.787 320.326 7.061  0.415  -1.373 H23 42X 49 
42X H24 H24 H 0 1 N N N N N N 24.745 112.219 320.982 9.745  0.237  -1.224 H24 42X 50 
42X H25 H25 H 0 1 N N N N N N 25.412 113.427 319.833 9.267  1.951  -1.179 H25 42X 51 
42X H26 H26 H 0 1 N N N N N N 24.145 114.518 321.647 10.368 2.201  1.028  H26 42X 52 
42X H27 H27 H 0 1 N N N N N N 23.358 114.772 320.052 10.847 0.488  0.984  H27 42X 53 
42X H28 H28 H 0 1 N N N N N N 22.690 113.564 321.202 11.523 1.631  -0.201 H28 42X 54 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
42X O45 C44 DOUB N N 1  
42X C39 C36 SING N N 2  
42X C39 N42 SING N N 3  
42X C36 N34 SING N N 4  
42X O33 C32 DOUB N N 5  
42X C44 N42 SING N N 6  
42X C44 C46 SING N N 7  
42X O23 C22 DOUB N N 8  
42X N34 C32 SING N N 9  
42X C18 C22 SING N N 10 
42X C18 O20 SING N N 11 
42X C18 C09 SING N N 12 
42X C32 C29 SING N N 13 
42X C46 C49 SING N N 14 
42X C22 N24 SING N N 15 
42X C10 C09 SING N N 16 
42X C14 C09 SING N N 17 
42X C09 C06 SING N N 18 
42X N24 C26 SING N N 19 
42X C26 C29 SING N N 20 
42X C06 O05 SING N N 21 
42X O05 P02 SING N N 22 
42X P02 O03 DOUB N N 23 
42X P02 O04 SING N N 24 
42X P02 O01 SING N N 25 
42X C14 H1  SING N N 26 
42X C14 H2  SING N N 27 
42X C14 H3  SING N N 28 
42X C10 H4  SING N N 29 
42X C10 H5  SING N N 30 
42X C10 H6  SING N N 31 
42X O01 H7  SING N N 32 
42X O04 H8  SING N N 33 
42X C06 H9  SING N N 34 
42X C06 H10 SING N N 35 
42X C18 H11 SING N N 36 
42X O20 H12 SING N N 37 
42X N24 H13 SING N N 38 
42X C26 H14 SING N N 39 
42X C26 H15 SING N N 40 
42X C29 H16 SING N N 41 
42X C29 H17 SING N N 42 
42X N34 H18 SING N N 43 
42X C36 H19 SING N N 44 
42X C36 H20 SING N N 45 
42X C39 H21 SING N N 46 
42X C39 H22 SING N N 47 
42X N42 H23 SING N N 48 
42X C46 H24 SING N N 49 
42X C46 H25 SING N N 50 
42X C49 H26 SING N N 51 
42X C49 H27 SING N N 52 
42X C49 H28 SING N N 53 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
42X SMILES           ACDLabs              12.01 "O=P(OCC(C(O)C(=O)NCCC(=O)NCCNC(=O)CC)(C)C)(O)O"                                                                                                                     
42X InChI            InChI                1.03  "InChI=1S/C14H28N3O8P/c1-4-10(18)15-7-8-16-11(19)5-6-17-13(21)12(20)14(2,3)9-25-26(22,23)24/h12,20H,4-9H2,1-3H3,(H,15,18)(H,16,19)(H,17,21)(H2,22,23,24)/t12-/m0/s1" 
42X InChIKey         InChI                1.03  IEZRALNUCGHOKF-LBPRGKRZSA-N                                                                                                                                          
42X SMILES_CANONICAL CACTVS               3.385 "CCC(=O)NCCNC(=O)CCNC(=O)[C@H](O)C(C)(C)CO[P](O)(O)=O"                                                                                                               
42X SMILES           CACTVS               3.385 "CCC(=O)NCCNC(=O)CCNC(=O)[CH](O)C(C)(C)CO[P](O)(O)=O"                                                                                                                
42X SMILES_CANONICAL "OpenEye OEToolkits" 1.9.2 "CCC(=O)NCCNC(=O)CCNC(=O)[C@@H](C(C)(C)COP(=O)(O)O)O"                                                                                                                
42X SMILES           "OpenEye OEToolkits" 1.9.2 "CCC(=O)NCCNC(=O)CCNC(=O)C(C(C)(C)COP(=O)(O)O)O"                                                                                                                     
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
42X "SYSTEMATIC NAME" ACDLabs              12.01 "N~3~-[(2R)-2-hydroxy-3,3-dimethyl-4-(phosphonooxy)butanoyl]-N-[2-(propanoylamino)ethyl]-beta-alaninamide"                                   
42X "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.9.2 "[(3R)-2,2-dimethyl-3-oxidanyl-4-oxidanylidene-4-[[3-oxidanylidene-3-[2-(propanoylamino)ethylamino]propyl]amino]butyl] dihydrogen phosphate" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
42X "Create component" 2015-01-23 RCSB 
42X "Initial release"  2016-01-27 RCSB 
42X "Modify PCM"       2024-09-27 PDBE 
# 
loop_
_pdbx_chem_comp_pcm.pcm_id 
_pdbx_chem_comp_pcm.comp_id 
_pdbx_chem_comp_pcm.modified_residue_id 
_pdbx_chem_comp_pcm.type 
_pdbx_chem_comp_pcm.category 
_pdbx_chem_comp_pcm.position 
_pdbx_chem_comp_pcm.polypeptide_position 
_pdbx_chem_comp_pcm.comp_id_linking_atom 
_pdbx_chem_comp_pcm.modified_residue_id_linking_atom 
_pdbx_chem_comp_pcm.uniprot_specific_ptm_accession 
_pdbx_chem_comp_pcm.uniprot_generic_ptm_accession 
1 42X CYS None Crosslinker "Amino-acid side chain" "Any position" C46 SG ? ? 
2 42X SER None Crosslinker "Amino-acid side chain" "Any position" P02 OG ? ? 
# 
