data_YXW
# 
_chem_comp.id                                    YXW 
_chem_comp.name                                  "3-fluoro-N-({(1r,4r)-4-[(2-fluorophenoxy)methyl]-1-hydroxycyclohexyl}methyl)-4-hydroxybenzamide" 
_chem_comp.type                                  non-polymer 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C21 H23 F2 N O4" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2023-03-03 
_chem_comp.pdbx_modified_date                    2023-08-04 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        391.408 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     YXW 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        8G89 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  RCSB 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
YXW C4  C1  C 0 1 Y N N 43.600 22.697 82.512 -5.475 1.785  -0.904 C4  YXW 1  
YXW C6  C2  C 0 1 Y N N 42.264 20.791 82.968 -6.671 2.833  0.888  C6  YXW 2  
YXW C9  C3  C 0 1 N N N 42.479 24.641 79.627 -3.385 -0.845 0.564  C9  YXW 3  
YXW C13 C4  C 0 1 N N N 45.321 25.934 77.329 -0.286 -2.024 -1.394 C13 YXW 4  
YXW C20 C5  C 0 1 N N N 42.421 25.480 73.331 2.806  -0.628 0.924  C20 YXW 5  
YXW C18 C6  C 0 1 N N N 44.026 25.701 75.170 0.985  -2.237 0.746  C18 YXW 6  
YXW C16 C7  C 0 1 N N N 42.469 26.420 77.887 -1.882 -2.807 0.934  C16 YXW 7  
YXW O17 O1  O 0 1 N N N 45.312 27.649 75.701 1.153  -3.921 -0.980 O17 YXW 8  
YXW C26 C8  C 0 1 Y N N 40.180 27.933 71.429 5.020  0.999  -1.632 C26 YXW 9  
YXW C1  C9  C 0 1 Y N N 41.517 21.050 81.838 -6.067 1.980  1.793  C1  YXW 10 
YXW C2  C10 C 0 1 Y N N 41.807 22.143 81.038 -5.162 1.031  1.355  C2  YXW 11 
YXW C3  C11 C 0 1 Y N N 42.859 22.985 81.382 -4.863 0.931  0.006  C3  YXW 12 
YXW C5  C12 C 0 1 Y N N 43.319 21.617 83.315 -6.375 2.736  -0.460 C5  YXW 13 
YXW F7  F1  F 0 1 N N N 44.636 23.510 82.825 -5.185 1.691  -2.220 F7  YXW 14 
YXW O8  O2  O 0 1 N N N 43.239 24.138 80.737 -3.974 -0.002 -0.427 O8  YXW 15 
YXW C10 C13 C 0 1 N N N 43.320 25.675 78.914 -2.418 -1.823 -0.108 C10 YXW 16 
YXW C12 C14 C 0 1 N N N 44.518 24.995 78.236 -1.252 -1.046 -0.723 C12 YXW 17 
YXW C14 C15 C 0 1 N N N 44.450 26.655 76.300 0.250  -3.008 -0.352 C14 YXW 18 
YXW C15 C16 C 0 1 N N N 43.313 27.369 77.035 -0.916 -3.785 0.263  C15 YXW 19 
YXW N19 N1  N 0 1 N N N 43.084 26.249 74.204 2.026  -1.401 0.143  N19 YXW 20 
YXW O21 O3  O 0 1 N N N 42.657 24.283 73.212 2.647  -0.625 2.130  O21 YXW 21 
YXW C22 C17 C 0 1 Y N N 41.339 26.113 72.511 3.855  0.215  0.317  C22 YXW 22 
YXW C23 C18 C 0 1 Y N N 40.406 25.225 71.983 4.665  1.016  1.125  C23 YXW 23 
YXW C24 C19 C 0 1 Y N N 39.403 25.713 71.189 5.637  1.810  0.552  C24 YXW 24 
YXW C25 C20 C 0 1 Y N N 39.247 27.049 70.901 5.820  1.800  -0.827 C25 YXW 25 
YXW C27 C21 C 0 1 Y N N 41.215 27.472 72.222 4.040  0.213  -1.068 C27 YXW 26 
YXW O28 O4  O 0 1 N N N 38.225 27.507 70.135 6.784  2.574  -1.387 O28 YXW 27 
YXW F29 F2  F 0 1 N N N 38.543 24.838 70.625 6.421  2.586  1.332  F29 YXW 28 
YXW H33 H1  H 0 1 N N N 42.024 19.938 83.586 -7.374 3.576  1.234  H33 YXW 29 
YXW H35 H2  H 0 1 N N N 41.549 25.103 79.990 -2.841 -0.235 1.285  H35 YXW 30 
YXW H34 H3  H 0 1 N N N 42.236 23.819 78.938 -4.167 -1.404 1.078  H34 YXW 31 
YXW H39 H4  H 0 1 N N N 46.079 25.343 76.795 -0.809 -2.573 -2.177 H39 YXW 32 
YXW H38 H5  H 0 1 N N N 45.819 26.687 77.957 0.545  -1.470 -1.832 H38 YXW 33 
YXW H45 H6  H 0 1 N N N 43.562 24.816 75.630 0.278  -1.606 1.283  H45 YXW 34 
YXW H46 H7  H 0 1 N N N 44.932 25.398 74.625 1.443  -2.942 1.440  H46 YXW 35 
YXW H43 H8  H 0 1 N N N 41.701 27.003 78.416 -1.358 -2.258 1.717  H43 YXW 36 
YXW H42 H9  H 0 1 N N N 41.982 25.686 77.228 -2.713 -3.361 1.372  H42 YXW 37 
YXW H44 H10 H 0 1 N N N 45.599 28.263 76.367 1.918  -3.497 -1.392 H44 YXW 38 
YXW H49 H11 H 0 1 N N N 40.096 28.989 71.218 5.162  0.998  -2.703 H49 YXW 39 
YXW H30 H12 H 0 1 N N N 40.699 20.395 81.575 -6.300 2.058  2.845  H30 YXW 40 
YXW H31 H13 H 0 1 N N N 41.220 22.340 80.153 -4.688 0.369  2.065  H31 YXW 41 
YXW H32 H14 H 0 1 N N N 43.909 21.417 84.197 -6.848 3.403  -1.165 H32 YXW 42 
YXW H11 H15 H 0 1 N N N 43.698 26.399 79.652 -2.942 -2.372 -0.890 H11 YXW 43 
YXW H36 H16 H 0 1 N N N 44.145 24.158 77.628 -0.728 -0.497 0.060  H36 YXW 44 
YXW H37 H17 H 0 1 N N N 45.188 24.609 79.018 -1.634 -0.345 -1.465 H37 YXW 45 
YXW H41 H18 H 0 1 N N N 43.747 28.138 77.691 -0.534 -4.486 1.005  H41 YXW 46 
YXW H40 H19 H 0 1 N N N 42.660 27.848 76.291 -1.439 -4.334 -0.520 H40 YXW 47 
YXW H47 H20 H 0 1 N N N 42.926 27.236 74.192 2.153  -1.403 -0.818 H47 YXW 48 
YXW H48 H21 H 0 1 N N N 40.472 24.168 72.196 4.525  1.021  2.196  H48 YXW 49 
YXW H50 H22 H 0 1 N N N 41.935 28.171 72.622 3.415  -0.406 -1.696 H50 YXW 50 
YXW H51 H23 H 0 1 N N N 38.289 28.451 70.052 7.643  2.137  -1.468 H51 YXW 51 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
YXW O28 C25 SING N N 1  
YXW F29 C24 SING N N 2  
YXW C25 C24 DOUB Y N 3  
YXW C25 C26 SING Y N 4  
YXW C24 C23 SING Y N 5  
YXW C26 C27 DOUB Y N 6  
YXW C23 C22 DOUB Y N 7  
YXW C27 C22 SING Y N 8  
YXW C22 C20 SING N N 9  
YXW O21 C20 DOUB N N 10 
YXW C20 N19 SING N N 11 
YXW N19 C18 SING N N 12 
YXW C18 C14 SING N N 13 
YXW O17 C14 SING N N 14 
YXW C14 C15 SING N N 15 
YXW C14 C13 SING N N 16 
YXW C15 C16 SING N N 17 
YXW C13 C12 SING N N 18 
YXW C16 C10 SING N N 19 
YXW C12 C10 SING N N 20 
YXW C10 C9  SING N N 21 
YXW C9  O8  SING N N 22 
YXW O8  C3  SING N N 23 
YXW C2  C3  DOUB Y N 24 
YXW C2  C1  SING Y N 25 
YXW C3  C4  SING Y N 26 
YXW C1  C6  DOUB Y N 27 
YXW C4  F7  SING N N 28 
YXW C4  C5  DOUB Y N 29 
YXW C6  C5  SING Y N 30 
YXW C6  H33 SING N N 31 
YXW C9  H35 SING N N 32 
YXW C9  H34 SING N N 33 
YXW C13 H39 SING N N 34 
YXW C13 H38 SING N N 35 
YXW C18 H45 SING N N 36 
YXW C18 H46 SING N N 37 
YXW C16 H43 SING N N 38 
YXW C16 H42 SING N N 39 
YXW O17 H44 SING N N 40 
YXW C26 H49 SING N N 41 
YXW C1  H30 SING N N 42 
YXW C2  H31 SING N N 43 
YXW C5  H32 SING N N 44 
YXW C10 H11 SING N N 45 
YXW C12 H36 SING N N 46 
YXW C12 H37 SING N N 47 
YXW C15 H41 SING N N 48 
YXW C15 H40 SING N N 49 
YXW N19 H47 SING N N 50 
YXW C23 H48 SING N N 51 
YXW C27 H50 SING N N 52 
YXW O28 H51 SING N N 53 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
YXW SMILES           ACDLabs              12.01 "OC1(CNC(=O)c2ccc(O)c(F)c2)CCC(CC1)COc1ccccc1F"                                                                                                               
YXW InChI            InChI                1.06  "InChI=1S/C21H23F2NO4/c22-16-3-1-2-4-19(16)28-12-14-7-9-21(27,10-8-14)13-24-20(26)15-5-6-18(25)17(23)11-15/h1-6,11,14,25,27H,7-10,12-13H2,(H,24,26)/t14-,21-" 
YXW InChIKey         InChI                1.06  GPSLYTIDVZDODP-HNSKJHPRSA-N                                                                                                                                   
YXW SMILES_CANONICAL CACTVS               3.385 "Oc1ccc(cc1F)C(=O)NC[C@@]2(O)CC[C@H](CC2)COc3ccccc3F"                                                                                                         
YXW SMILES           CACTVS               3.385 "Oc1ccc(cc1F)C(=O)NC[C]2(O)CC[CH](CC2)COc3ccccc3F"                                                                                                            
YXW SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "c1ccc(c(c1)OCC2CCC(CC2)(CNC(=O)c3ccc(c(c3)F)O)O)F"                                                                                                           
YXW SMILES           "OpenEye OEToolkits" 2.0.7 "c1ccc(c(c1)OCC2CCC(CC2)(CNC(=O)c3ccc(c(c3)F)O)O)F"                                                                                                           
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
YXW "SYSTEMATIC NAME" ACDLabs              12.01 "3-fluoro-N-({(1r,4r)-4-[(2-fluorophenoxy)methyl]-1-hydroxycyclohexyl}methyl)-4-hydroxybenzamide"      
YXW "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 "3-fluoranyl-~{N}-[[4-[(2-fluoranylphenoxy)methyl]-1-oxidanyl-cyclohexyl]methyl]-4-oxidanyl-benzamide" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
YXW "Create component" 2023-03-03 RCSB 
YXW "Initial release"  2023-08-09 RCSB 
# 
