data_YQW
# 
_chem_comp.id                                    YQW 
_chem_comp.name                                  "7-[(1~{S})-1-[2-(aminomethyl)-6-oxidanylidene-5-oxa-7-azaspiro[3.4]octan-7-yl]ethyl]-3-(6-oxidanylidene-1~{H}-pyridazin-4-yl)-1~{H}-indole-2-carboxylic acid" 
_chem_comp.type                                  non-polymer 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C22 H23 N5 O5" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2023-06-20 
_chem_comp.pdbx_modified_date                    2024-07-05 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        437.449 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     YQW 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        8PGZ 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  PDBE 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.pdbx_backbone_atom_flag 
_chem_comp_atom.pdbx_n_terminal_atom_flag 
_chem_comp_atom.pdbx_c_terminal_atom_flag 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
YQW C10  C1  C 0 1 Y N N N N N -21.664 -11.895 9.818  -2.439 -0.018 0.130  C10  YQW 1  
YQW C11  C2  C 0 1 N N N N N N -21.128 -12.063 8.439  -3.751 -0.445 -0.399 C11  YQW 2  
YQW C13  C3  C 0 1 N N N N N N -20.801 -13.339 6.321  -6.142 -0.615 -0.212 C13  YQW 3  
YQW N15  N1  N 0 1 N N N N N N -20.012 -12.237 5.849  -6.174 -1.249 -1.400 N15  YQW 4  
YQW C17  C4  C 0 1 N N N N N N -20.300 -10.975 7.918  -3.836 -1.120 -1.640 C17  YQW 5  
YQW C19  C5  C 0 1 Y N N N N N -21.451 -14.238 10.902 -2.105 2.405  -0.846 C19  YQW 6  
YQW C21  C6  C 0 1 Y N N N N N -22.266 -14.220 13.176 -0.043 3.424  -0.192 C21  YQW 7  
YQW C01  C7  C 0 1 N N N N N N -22.635 -12.480 15.666 2.175  3.699  1.399  C01  YQW 8  
YQW C02  C8  C 0 1 N N S N N N -23.200 -12.099 14.301 1.620  2.278  1.281  C02  YQW 9  
YQW C03  C9  C 0 1 Y N N N N N -22.582 -12.871 13.128 0.310  2.311  0.537  C03  YQW 10 
YQW C04  C10 C 0 1 Y N N N N N -22.331 -12.237 11.931 -0.549 1.214  0.586  C04  YQW 11 
YQW C06  C11 C 0 1 Y N N N N N -22.182 -10.725 10.369 -1.595 -0.750 0.947  C06  YQW 12 
YQW C07  C12 C 0 1 N N N N N N -22.376 -9.357  9.777  -1.860 -2.106 1.449  C07  YQW 13 
YQW C12  C13 C 0 1 N N N N N N -21.360 -13.245 7.683  -4.910 -0.195 0.318  C12  YQW 14 
YQW C18  C14 C 0 1 Y N N N N N -21.774 -12.866 10.831 -1.768 1.265  -0.113 C18  YQW 15 
YQW C20  C15 C 0 1 Y N N N N N -21.715 -14.897 12.073 -1.248 3.468  -0.881 C20  YQW 16 
YQW C23  C16 C 0 1 N N N N N N -25.429 -13.466 14.700 3.254  0.247  1.087  C23  YQW 17 
YQW C24  C17 C 0 1 N N N N N N -26.861 -13.116 14.424 4.122  -0.226 -0.084 C24  YQW 18 
YQW C25  C18 C 0 1 N N N N N N -27.841 -14.224 14.057 5.592  -0.484 0.245  C25  YQW 19 
YQW C26  C19 C 0 1 N N N N N N -28.830 -13.662 15.073 5.509  -1.677 -0.726 C26  YQW 20 
YQW C27  C20 C 0 1 N N N N N N -29.449 -14.583 16.078 6.247  -2.922 -0.230 C27  YQW 21 
YQW C29  C21 C 0 1 N N N N N N -27.718 -12.827 15.630 3.996  -1.705 -0.445 C29  YQW 22 
YQW C31  C22 C 0 1 N N N N N N -25.507 -11.491 13.458 2.974  1.633  -0.716 C31  YQW 23 
YQW N05  N2  N 0 1 Y N N N N N -22.527 -10.942 11.616 -0.471 -0.007 1.214  N05  YQW 24 
YQW N16  N3  N 0 1 N N N N N N -19.760 -11.052 6.602  -4.993 -1.498 -2.107 N16  YQW 25 
YQW N22  N4  N 0 1 N N N N N N -24.670 -12.315 14.249 2.575  1.441  0.551  N22  YQW 26 
YQW N28  N5  N 0 1 N N N N N N -30.579 -15.286 15.485 6.213  -3.958 -1.271 N28  YQW 27 
YQW O08  O1  O 0 1 N N N N N N -22.354 -8.312  10.491 -0.958 -2.719 2.242  O08  YQW 28 
YQW O09  O2  O 0 1 N N N N N N -22.800 -9.363  8.577  -2.891 -2.674 1.149  O09  YQW 29 
YQW O14  O3  O 0 1 N N N N N N -20.922 -14.328 5.621  -7.178 -0.406 0.400  O14  YQW 30 
YQW O30  O4  O 0 1 N N N N N N -26.786 -11.998 13.513 3.861  0.718  -1.150 O30  YQW 31 
YQW O32  O5  O 0 1 N N N N N N -25.187 -10.541 12.821 2.573  2.548  -1.407 O32  YQW 32 
YQW H151 H1  H 0 0 N N N N N N -19.614 -12.304 4.934  -7.023 -1.540 -1.768 H151 YQW 33 
YQW H171 H2  H 0 0 N N N N N N -20.098 -10.111 8.533  -2.937 -1.323 -2.203 H171 YQW 34 
YQW H191 H3  H 0 0 N N N N N N -21.010 -14.751 10.060 -3.041 2.447  -1.384 H191 YQW 35 
YQW H211 H4  H 0 0 N N N N N N -22.449 -14.768 14.089 0.625  4.272  -0.229 H211 YQW 36 
YQW H012 H5  H 0 0 N N N N N N -23.129 -11.884 16.447 1.464  4.323  1.942  H012 YQW 37 
YQW H011 H6  H 0 0 N N N N N N -22.815 -13.549 15.852 3.122  3.676  1.937  H011 YQW 38 
YQW H013 H7  H 0 0 N N N N N N -21.553 -12.282 15.683 2.332  4.112  0.402  H013 YQW 39 
YQW H021 H8  H 0 0 N N N N N N -23.001 -11.029 14.140 1.462  1.866  2.277  H021 YQW 40 
YQW H121 H9  H 0 0 N N N N N N -21.935 -14.059 8.099  -4.867 0.315  1.269  H121 YQW 41 
YQW H201 H10 H 0 0 N N N N N N -21.497 -15.952 12.151 -1.509 4.350  -1.447 H201 YQW 42 
YQW H231 H11 H 0 0 N N N N N N -25.136 -14.366 14.140 2.527  -0.518 1.360  H231 YQW 43 
YQW H232 H12 H 0 0 N N N N N N -25.272 -13.636 15.775 3.874  0.511  1.944  H232 YQW 44 
YQW H252 H13 H 0 0 N N N N N N -28.194 -14.188 13.016 6.261  0.308  -0.091 H252 YQW 45 
YQW H251 H14 H 0 0 N N N N N N -27.483 -15.238 14.288 5.764  -0.775 1.281  H251 YQW 46 
YQW H261 H15 H 0 0 N N N N N N -29.590 -13.039 14.579 5.757  -1.419 -1.755 H261 YQW 47 
YQW H272 H16 H 0 0 N N N N N N -28.699 -15.316 16.410 7.283  -2.665 -0.007 H272 YQW 48 
YQW H271 H17 H 0 0 N N N N N N -29.798 -13.998 16.942 5.763  -3.296 0.672  H271 YQW 49 
YQW H291 H18 H 0 0 N N N N N N -27.303 -13.211 16.573 3.719  -2.339 0.397  H291 YQW 50 
YQW H292 H19 H 0 0 N N N N N N -27.976 -11.764 15.748 3.390  -1.888 -1.332 H292 YQW 51 
YQW H051 H20 H 0 0 N N N N N N -22.883 -10.248 12.241 0.271  -0.301 1.765  H051 YQW 52 
YQW H282 H21 H 0 0 N N N N N N -30.985 -15.898 16.164 6.598  -3.613 -2.137 H282 YQW 53 
YQW H1   H22 H 0 1 N N N N N N -31.263 -14.622 15.183 6.694  -4.791 -0.967 H1   YQW 54 
YQW H2   H24 H 0 1 N N N N N N -22.693 -7.579  9.991  -1.176 -3.610 2.547  H2   YQW 55 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
YQW O14 C13  DOUB N N 1  
YQW N15 C13  SING N N 2  
YQW N15 N16  SING N N 3  
YQW C13 C12  SING N N 4  
YQW N16 C17  DOUB N N 5  
YQW C12 C11  DOUB N N 6  
YQW C17 C11  SING N N 7  
YQW C11 C10  SING N N 8  
YQW O09 C07  DOUB N N 9  
YQW C07 C06  SING N N 10 
YQW C07 O08  SING N N 11 
YQW C10 C06  DOUB Y N 12 
YQW C10 C18  SING Y N 13 
YQW C06 N05  SING Y N 14 
YQW C18 C19  DOUB Y N 15 
YQW C18 C04  SING Y N 16 
YQW C19 C20  SING Y N 17 
YQW N05 C04  SING Y N 18 
YQW C04 C03  DOUB Y N 19 
YQW C20 C21  DOUB Y N 20 
YQW O32 C31  DOUB N N 21 
YQW C03 C21  SING Y N 22 
YQW C03 C02  SING N N 23 
YQW C31 O30  SING N N 24 
YQW C31 N22  SING N N 25 
YQW O30 C24  SING N N 26 
YQW C25 C24  SING N N 27 
YQW C25 C26  SING N N 28 
YQW N22 C02  SING N N 29 
YQW N22 C23  SING N N 30 
YQW C02 C01  SING N N 31 
YQW C24 C23  SING N N 32 
YQW C24 C29  SING N N 33 
YQW C26 C29  SING N N 34 
YQW C26 C27  SING N N 35 
YQW N28 C27  SING N N 36 
YQW N15 H151 SING N N 37 
YQW C17 H171 SING N N 38 
YQW C19 H191 SING N N 39 
YQW C21 H211 SING N N 40 
YQW C01 H012 SING N N 41 
YQW C01 H011 SING N N 42 
YQW C01 H013 SING N N 43 
YQW C02 H021 SING N N 44 
YQW C12 H121 SING N N 45 
YQW C20 H201 SING N N 46 
YQW C23 H231 SING N N 47 
YQW C23 H232 SING N N 48 
YQW C25 H252 SING N N 49 
YQW C25 H251 SING N N 50 
YQW C26 H261 SING N N 51 
YQW C27 H272 SING N N 52 
YQW C27 H271 SING N N 53 
YQW C29 H291 SING N N 54 
YQW C29 H292 SING N N 55 
YQW N05 H051 SING N N 56 
YQW N28 H282 SING N N 57 
YQW N28 H1   SING N N 58 
YQW O08 H2   SING N N 59 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
YQW InChI            InChI                1.06  "InChI=1S/C22H23N5O5/c1-11(27-10-22(32-21(27)31)6-12(7-22)8-23)14-3-2-4-15-17(13-5-16(28)26-24-9-13)19(20(29)30)25-18(14)15/h2-5,9,11-12,25H,6-8,10,23H2,1H3,(H,26,28)(H,29,30)/t11-,12-,22-/m0/s1" 
YQW InChIKey         InChI                1.06  CGFMMSFCBYQRSU-IBILFNBTSA-N                                                                                                                                                                         
YQW SMILES_CANONICAL CACTVS               3.385 "C[C@H](N1C[C@]2(C[C@@H](CN)C2)OC1=O)c3cccc4c3[nH]c(C(O)=O)c4C5=CC(=O)NN=C5"                                                                                                                        
YQW SMILES           CACTVS               3.385 "C[CH](N1C[C]2(C[CH](CN)C2)OC1=O)c3cccc4c3[nH]c(C(O)=O)c4C5=CC(=O)NN=C5"                                                                                                                            
YQW SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "C[C@@H](c1cccc2c1[nH]c(c2C3=CC(=O)NN=C3)C(=O)O)N4CC5(CC(C5)CN)OC4=O"                                                                                                                               
YQW SMILES           "OpenEye OEToolkits" 2.0.7 "CC(c1cccc2c1[nH]c(c2C3=CC(=O)NN=C3)C(=O)O)N4CC5(CC(C5)CN)OC4=O"                                                                                                                                    
# 
_pdbx_chem_comp_identifier.comp_id           YQW 
_pdbx_chem_comp_identifier.type              "SYSTEMATIC NAME" 
_pdbx_chem_comp_identifier.program           "OpenEye OEToolkits" 
_pdbx_chem_comp_identifier.program_version   2.0.7 
_pdbx_chem_comp_identifier.identifier        "7-[(1~{S})-1-[2-(aminomethyl)-6-oxidanylidene-5-oxa-7-azaspiro[3.4]octan-7-yl]ethyl]-3-(6-oxidanylidene-1~{H}-pyridazin-4-yl)-1~{H}-indole-2-carboxylic acid" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
YQW "Create component" 2023-06-20 PDBE 
YQW "Initial release"  2024-07-10 RCSB 
# 
